Tympanuchus pallidicinctus (lesser prairie-chicken): 128090998
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Entry
128090998 CDS
T08967
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpai01002
]
128090998 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128090998 (VCPIP1)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128090998 (VCPIP1)
Peptidases and inhibitors [BR:
tpai01002
]
Cysteine peptidases
Family C64
128090998 (VCPIP1)
Ubiquitin system [BR:
tpai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
128090998 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
128090998
NCBI-ProteinID:
XP_052559826
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MSQPRQQPPPPPSPQQQPQPPPPAAAKKRERRIFSGTCPDPKCQARLFFPAHGPQGAGSI
ECTDCGQRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVLGLSNYH
CKLLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETVGYGKDRSG
SLIYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHF
EENLSHYKALFHDFIDVAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIILL
DSLSGMRSSGDYSATFLPGLVPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAAL
PKLPRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFMSKHG
IHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLMCGALSEHHVPPEWLA
PGGKLYNLAKNTHGQLRPDKNYSFPLNNLVCSYSPAKDVLVPDYSLSSLTTCNWCHSNLV
RRVREDGSVSYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWSGRVVRET
VYWFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPV
NIDGAHAQRAGEVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKIERTIQQNIADQAS
VMQKRKSEKVKQEHKGQPRTVSPGAVREGPSSAPATPTKTPYSPTSTKEKKIRITTNDGR
QSMLTLKCTTTFLELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQHGDR
IAIEILKGKEESSQPAAAHSAHAVKHDDVAVTSKISSKELQEQVDKEMYSLCLLATLMGE
DVWSYAKGLPQLFQQGGVFYSIMKKTTGLVDGKHCTFPHLPGKNFVYNAAEDRLELCVDA
AGHFPIGPDVEDLVKEALSQVRAEAASRSREASPSHGMLKLGSGGVVKKKSEQLHNITAF
QGKGHSLGTASGSQQHDQRARETPLLRKHSTETDFSPAKIEPSVFPAASGKSELIRIAPG
VVTMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSAAVDVSQRKVEAVSS
TAKTGSFQAALPEPFSAPGGTEHLNIESAGDNMENSVGTTFPARSKAQKGNSVEELEEMD
SQDAGISNVTEPMDHS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccccggcagcagccgccgccgccgccgtctcctcagcagcagccgcagccg
ccgcctccggccgccgccaagaagcgggagcggcgcatcttctcgggcacctgccccgac
cccaaatgccaggcgcggctgttcttcccggcccacgggccgcagggcgccggcagcatc
gagtgcacggactgcgggcagcggcacgagcagcggcagctgctggcggtggaggaggtg
acggaccccgacctggtgctgcacaacctgctgcggaacgcgctgctgggcgtcagcggc
gccgggccgccccgcaggaacaccgagctcgtcaaggtgctgggcctctccaactaccac
tgcaagctgctggctcccatcctggcccgctacggcatggacaagcagacgggcaaggcc
aagctcctcacggagatgaaccagggagacatcttcgactgctccctgctgggggaccgc
gccttcctcatcgagccggagcacgtcgagaccgtcggctacggcaaggaccgctccggc
agcctcatctacctgcatgacactctggaagacatcaagaaggccaacaacagccaggag
tgcctcattcctgtccacgtggatggagacggccactgtctggtccacgcggtctcacgg
gcgctcgtgggcagggaactattctggcacgctctgcgagagaacttgaagaagcatttt
gaggagaacctgagtcactacaaggcgctcttccacgattttatcgacgtggctgagtgg
gaggacatcatcaatgagtgcgacccgttgtttgttcctccggaaggtgtgcccatgggc
cttaggaatattcacatctttggcctggccaacgtgcttcatcggcctatcatcctgtta
gactcactgagcggaatgcgaagctccggagactattcagcaacattcctccctggtctg
gtacccctagaaaaatgtatgggaaaagatggcatgttgaacaagccgatttgcatcgcc
tggagtagttcaggacgtaaccattatattcctctggttggaataaaaggtgctgcttta
cctaaactgcctagaaagctcctgcctaaagcctggggagttccacaagacctcatcaaa
aaatacatcaagttagaggaggacggtggttgtgttatcggaggagacagaagcttgcaa
gataagtatttgatgagactggttgctgcaatggaggaggttttcatgagtaaacacggt
attcaccccagtcttgtagctgatgtgcatcagtacttctacagaaggactggggtaata
ggagtccagcctgaagaagtcacggcagctgccaaaaaagcagtgatggacaaccgcctt
cacaggtgcctgatgtgtggagccctttcagaacatcatgtgcctccagagtggttggct
ccaggggggaaattgtataatctggcaaaaaatacccacggtcagctgaggcctgacaaa
aattacagctttcccctgaacaatttggtgtgttcttacagccctgcaaaggatgtgctg
gtaccagactacagcctgagtagtttgactacgtgtaactggtgtcacagtaacttagtg
cgtcgtgtccgagaagacggctctgtttcgtatttggatggagacagaactaacactagg
tctacgggtggcaagtgtggctgtggattcaagcactactgggaaggtaaagagtacgat
aacctccccgaagcgtttcccattactctcgagtggagtggaagagtggtgagagagacg
gtctactggtttcagtatgaaagtgacacctctttgaacagcaacgtgtatgatgttgcc
atgaagcttgtcaccaaacatttccctggtgagtttggtagtgagattcttgttcagaaa
gttgtcaacacgatattgcatcaaactgccaaaaagaaccctgatgattatacccctgta
aatattgacggtgctcatgcccaaagagctggggaggtacagcaaggacaagagttagaa
tcacaacttccaaccaaaattattttgactggacagaagacaaaaactttgcacaaggag
gagttaaatatgagcaaaattgaaagaactattcagcagaacattgcagaccaggcctct
gtgatgcagaaacggaaaagtgaaaaagtaaaacaagagcacaaagggcaaccgagaact
gtgtctccaggggctgttcgtgaggggccatcatctgcacctgctacgccaacaaaaacc
ccgtattcgccaacgtctacaaaggaaaagaaaatccgaataacaacgaatgatgggagg
cagtccatgcttaccctgaagtgcactaccactttcttggaactacaggaaagcatagct
agagagtttaatattcctccatatttgcaatgtattcgctatggctttcctcctaaagag
cttttgcctcccaaagaaggcatggaaaatgaacctgtgcctttgcagcatggtgacaga
attgccatagaaatcctgaaaggtaaggaggagagcagccagcctgctgcagcacactca
gcccacgccgtgaaacatgacgatgtggcagtgaccagtaaaatctcatcgaaggagctg
caggagcaagttgataaggagatgtactctctgtgtcttctagcaacgctgatgggagaa
gacgtctggtcttatgcaaagggccttcctcaattgtttcagcagggcggagtattctac
agcataatgaagaaaaccacaggtttggtcgatggcaagcactgtacttttccacatctg
cctggtaaaaactttgtgtacaacgcggcggaagatcgattagagctgtgtgtggatgct
gctgggcactttcctatcggtcctgatgtcgaagacttggttaaagaggccttaagtcaa
gtgcgagcagaagctgcttcacgaagcagggaagcaagtccatctcatggaatgctgaag
ctgggtagtggtggagtagtgaaaaagaaatctgaacagctacataacataactgcattt
caaggaaagggccattcgctaggaactgcatctggtagtcaacaacatgatcaaagagcc
agggaaacaccacttttaagaaagcatagtacagaaacagacttcagtcctgctaaaatt
gagccttctgtattcccagctgcttctggtaagagcgagctgatccgaatagctcctgga
gttgtgacaatgagagacagcaggcagctcgaccctactttgattgaggcacagagaaaa
aagttgcaggaaatggtctcctctattcaggcttcaatggatagacacttgcgggatcag
aatacagagcagtcagcagcagttgatgtatctcaaagaaaagtagaggcagtgagttca
actgctaaaactgggagctttcaggctgccttgcctgaaccgttttctgcaccgggtggt
actgaacacttgaatattgagtcagctggtgataacatggagaattctgtgggaacaact
ttccctgcaaggtctaaagcacaaaagggaaattctgttgaggagcttgaggaaatggat
agtcaagatgcaggaattagtaatgtaactgagccaatggatcactcttga
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