Tympanuchus pallidicinctus (lesser prairie-chicken): 128091056
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Entry
128091056 CDS
T08967
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tpai00535
]
128091056 (COL14A1)
Proteoglycans [BR:
tpai00535
]
Extracellular matrix (ECM) proteoglycans
Others
128091056 (COL14A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Fn3_VIN3
Fn3_PBP1
VWA_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
128091056
NCBI-ProteinID:
XP_052559910
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MMLCWNEVQSCFLLAFLAVAAYSVSDAQGQVSPPTRLRYNVVNPDSVQISWKAPKGQFSG
YKLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQNYALQIIAFSDDKESKPAQGQFRIKD
IERRKETSKSKVKDPEKTNASKPAPEGNLFTCKTPAIADIVILVDGSWSIGRFNFRLVRL
FLENLVSAFNVGSDKTRVGLAQYSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGL
ALTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADI
NELKEIASEPDSTHVYNVADFNFMNTIVEGLTRTVCSRVEEQEKEIKGTIAASLGAPTDL
VTSDITARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSLSTAVLKNLMSLTEYQ
IAVFAIYSNAASEGLRGTETTLALPMASDLKLYDVSHSSMRAKWNGVAGATGYMILYAPL
TEGLAADEKEIKIGEASTELELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPS
NLKFSDVGHNSAKLTWDPAAKNVKGYRIMYVKTDGTETNEVEVGPVSTHTLKSLTALTEY
TAAIFSLYDEGQSEPLTGSFTTRKIPAPQHLEVDEASTDSFRVSWKPTSSDIAFYRLAWI
PLDGGESEEVVLNGDADSYVVEGLLPNTEYEVSLLAVFDDETESEVVAVLGATFAGTTAV
PTTVTTTTTTTTTTTPKPTIAVFRTGVRNLVIDDETTSSLRVVWDISDYNVQQFRVTYLT
AKGDRAEEAVRTIMVPGRQSTLLLQPLLPDTEYKVTITPIYADGEGVSVSAPGKTQPLSA
PRNLRVSDEWYNRLRISWDAPPSPTMGYRIVYKSINIPGPALETFVGDDINTILILNLFS
GTEYSVKVFASYSTGFSDALTGIAKTLYLGVTNLDTYQVRMTSLCTQWQLHRHATAYRVV
IESLVDGKKQEVNLGGGTPRHCFFELMPGTEYKISVHAQLQEIEGPAVSIMETTLPFPTQ
PPTSPSTTPPPPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFNKIISFLYSTVGALDKI
GPDGTQVAIVQFSDDPRTEFKLNAYKTKETLLEAIQRIAYKGGNTKTGKAIKHAREVLFT
GEAGMRKGIPKVLVVITDGRSQDDVNKVSREMQLDGFSFFAIGVADADYSELVNIGSKPS
ERHVFFVDDFDAFTKIEDELITFVCETASATCPLVFKDGDNFAGFKMMEMFGLVEKEFSA
IDGVSMEPGTFNVYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFAL
WEILNEQYEPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVIS
KTTAKIIIDCKEAGEKTINAAGNISSDGIEVLGRMVRSRGPRDNSAPLQLQMFDIVCATS
WANRDKCCELPGLRDEENCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPK
GPDGPRGEIGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPG
RDGAQGQRGLPGKDGPTGPQGPPGPVGIPGAPGVPGITGSQGPQGDVGAPGAPGPKGERG
ERGDLQSQAMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAP
GPQGEQGSPGMQGFPGNPGQPGRPGERGLPGEKGDRGNPGVGTQGPRGPPGSTGPPGESR
TGSPGPPGSPGPRGPAGHTGPPGSQGPAGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQ
LPHNSYQIYDPEDLYDGEQQPYVVHGSYPLPSPYSQSSYPSPHLAQPEFTPVREEMEAVE
LRSPGISRFRRNIAKRSIKTLEHKRENGKEPSQ
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgttggaatgaggtacagagctgcttcctcttggcttttttagctgttgca
gcttactctgtcagtgacgcccagggccaagtgtccccaccaacaaggctaaggtataat
gtagtcaatcctgacagtgtacagatctcttggaaagcccccaaagggcaattcagtgga
tataagctgcttgtcactccaagttcaggtggaaaaaccaatcaactaattcttcaaaac
actgcaaccaaagcaattattcagggtctaattccagaccaaaactatgcccttcagatc
attgccttcagtgatgacaaggagagtaagccagcccaaggccagttcagaattaaagac
atagagagaagaaaagaaacaagtaaatccaaagtgaaggatccggaaaaaacaaatgcg
agtaaaccagctccagaaggaaacctgtttacctgtaaaactccagctattgcagatatt
gtgattctagtagatggttcctggagtattggccgattcaatttcagacttgttcgactg
ttcctagaaaatctcgtttctgctttcaatgtgggatctgacaaaacaagagtaggtctt
gcacagtacagtggtgatccccgaattgaatggcatttgaatgcttatggcacaaaagat
gctgtattggatgcagtccgtaatctaccatataaaggagggaatacactaacaggtctt
gcattaacttacattttggagaacagttttaagccggaagctggtgcaaggcccggggta
tctaaaattggtatattgatcactgatgggaaatcccaagatgatgttatccctcctgct
aaaaacctacgggatgcaggcattgagctgtttgccatcggtgtgaagaatgcagatata
aatgaactcaaagaaattgcttctgaacctgacagtacacatgtttacaatgttgctgac
ttcaacttcatgaatactattgtcgaaggtcttaccagaacagtgtgttcacgagtagag
gaacaggaaaaggaaatcaaaggaacaattgctgcttcacttggagctcccactgatttg
gtcacgtctgatataacagctagaggattccgtgtcagctggactcatgctccaggcaaa
gtggaaaaatacagagttgtgtattatcccactcgaggaggacagcctgaagaggttgtg
gtagatggaagtttatcaacagcagttttgaaaaacctgatgtctttaactgaataccag
atagctgtatttgcaatatactcaaatgctgctagtgagggcctccgtggaactgaaact
acacttgccttgccaatggcatcagatctgaaactgtatgatgtgtcacacagcagcatg
agagctaagtggaatggagtagcaggtgccacaggttacatgatcttatatgctcccctg
acagaagggttggctgcggatgaaaaggagataaaaatcggagaagcatcaactgaactt
gaactggatggactattgccaaatacagaatatacagttacagtttatgccatgtttgga
gaagaagctagtgatccccttactggccaagaaacgacattacctctaagtcccccatca
aacttgaagttttctgatgttggacacaacagtgctaagctaacatgggatcctgctgcc
aaaaatgtgaaaggctatcgcatcatgtatgttaaaacagatggaacagaaaccaatgag
gtggaagttggtcctgtttcaacacatactttaaaaagtctgacagcccttactgaatat
actgctgctattttctccttgtatgatgaaggacaatctgaaccacttactggcagcttt
accacaagaaaaattccagctccccagcatttggaagttgatgaagcatcaacagatagt
tttagggtcagctggaaacccacatcctcggatattgctttttacagattggcatggatt
cctttggatggaggggaatctgaagaggttgtcttaaatggagatgcagacagttatgtt
gttgagggtttgttgcccaacacagaatatgaagtttctttgctggcagtttttgatgat
gagaccgaaagtgaagttgttgctgttcttggagctacatttgcaggaactactgcagtg
cctaccactgtgactactactactactactaccactaccacaactccgaagcccaccata
gcagtttttcgaacaggagtcagaaatcttgttatagacgatgaaacgacctcaagtctg
agggtggtgtgggacatttcggattacaacgttcagcagttcagagtgacctatctcaca
gccaaaggtgaccgtgccgaggaagcggtaagaacgataatggtgcctgggagacagagc
actcttctgcttcagcctctgctgcctgatacggaatacaaagttacaattactccaatc
tatgctgatggggagggagtcagtgtctcagctcctggcaaaactcaacccttatctgct
cctagaaatttacgtgtctcagatgaatggtacaacagattacgtattagttgggatgcc
ccaccatcaccaactatgggttacagaattgtctacaaatctatcaacatccctggtcct
gcattggagacctttgtaggagatgatattaataccattctcattctaaatctcttcagt
ggaacagagtacagtgtgaaagtgtttgcttcatactcaacaggcttcagtgatgcctta
acaggcatagccaaaaccttgtacctgggtgtgacaaatttggatacgtatcaagtccgc
atgactagtctctgtactcagtggcagcttcacagacatgctactgcatacagagtagtc
atagaatcacttgtggatgggaaaaaacaagaggtaaatcttggtggagggacacccaga
cattgcttctttgagctaatgcctggaactgaatataaaatcagtgtccatgcacagctt
caagagatagagggccctgctgtaagcatcatggagacaacattaccatttccaactcag
ccaccaacttctccttcaacaacaccaccaccacctacaatccctcctgcaaaagaagta
tgcaaagcagccaaagctgatctggtgttcctggtggatgggtcatggagtattggagat
gacaatttcaataaaataataagctttctgtatagcactgttggagctttggataagatt
ggccctgatggaacacaggtggcaatagttcaattcagtgatgatcccaggacagaattt
aaattgaatgcgtacaaaacaaaagagactcttcttgaggctattcagcgaatagcctac
aaaggaggaaatacaaaaacaggcaaagccattaaacatgccagagaagtcttgtttact
ggagaggcgggcatgagaaagggcattccaaaggttttggttgtcattactgatgggcga
tcacaggatgatgtgaacaaagtctccagagaaatgcaactagatggattcagctttttt
gctattggagttgctgatgctgattactcagagttagttaatattggcagcaagcccagt
gaaagacatgtcttctttgtggatgacttcgatgcctttacaaagattgaagatgagctg
attacttttgtttgtgaaactgcatcagcaacttgtccactggtatttaaagatggtgac
aactttgcaggatttaaaatgatggaaatgtttggcttggttgaaaaggagttttcagcc
attgatggggtttctatggaacctggtacatttaatgtttacccatgttacagactgcac
aaggatgccctggtgtcccagcctacaaaatatttgcatcctgaaggtctcccttcagac
tacaccattacatttctctttcgtatacttcccgatacacctcaggaaccatttgctctt
tgggagattttaaatgaacaatatgaaccactggttggagttattttagataatggtggt
aaaactctgactttctttaactatgactacaaaggagattttcaaactgtgacttttgaa
ggccctgaaataagaaagatattttatgggagttttcataagctgcatgttgttatcagc
aagactacagccaaaataattattgactgcaaagaagcaggtgagaagaccattaatgca
gcagggaacattagttctgatggcatagaagtgctgggaagaatggtcagatccagagga
ccaagagacaactctgcaccattgcaattgcagatgtttgacattgtttgtgctacctca
tgggccaatcgagacaaatgctgtgagcttcctggcttgagagatgaagaaaattgccct
gcccttcctcatgcctgttcctgttcagaagctaataagggtcccctgggacctccagga
ccaccgggtggtccaggtgtcagaggtgccaaaggtcatcgtggagatccaggtccaaag
ggaccagatggacctcgaggtgaaattggtgttcctggacctcaaggacctccaggacca
caaggacccagtggactttctattcaaggccttccagggccaccgggtgaaaagggagag
aaaggagatcttggttttcctggcctgcagggtgtcccaggagcatcaggttcacctgga
agagatggagctcaaggtcaaaggggccttcctggcaaagatggacccacaggcccacaa
ggacctcctggcccagttggcatacctggtgctccaggtgttccaggtattacaggaagc
caggggccacaaggtgatgttggagctcctggtgctcctggacctaaaggtgaaaggggt
gaacggggtgatctgcagtcccaagcaatggtgcgtgctgttgctcgtcaagtgtgtgaa
caactcatccagggtcatatggccagatataactccattctgaatcagataccaagccag
tctgtctcaacgcgaactattgcaggacctcctggggaaccaggccggccaggggctcca
gggccacagggtgagcaaggttctccaggcatgcaaggattcccaggaaaccctggtcaa
cctggaagaccaggagaaagaggtttaccgggtgagaaaggagacagaggaaatccaggt
gttggaactcaaggaccccgaggcccacccggatctacaggacctccaggagagagcaga
actggcagcccgggcccaccaggctctccaggcccacgaggccctgctggtcacaccggg
ccccctggctcccagggccccgccggccccccggggtactgtgacccctcctcgtgtgct
ggctatggtatgggaggtggatacggtgagccaactgatcaagacatcccagtagtgcag
ttgccacataactcctaccaaatctatgaccctgaggacctttatgatggtgagcaacag
ccgtacgtagttcacgggtcctaccctttaccatccccatactcccagtcctcctatcca
tcacctcatcttgctcaaccagagtttactcccgttcgagaagagatggaagccgttgag
ctgagatcccctggaattagtcgcttcagaaggaacatagccaaaagaagcatcaagact
ctggaacacaaaagggaaaatggcaaagagccctctcagtga
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