Tympanuchus pallidicinctus (lesser prairie-chicken): 128091250
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Entry
128091250 CDS
T08967
Symbol
CDH12
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128091250 (CDH12)
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Major cadherins
128091250 (CDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Stevor
ASFV_J13L
Fibulin_C
DUF443
RIFIN
VirB3
Motif
Other DBs
NCBI-GeneID:
128091250
NCBI-ProteinID:
XP_052560261
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLHPQPQQTLEAEPRENVVPVPGRRSSAQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGVGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDVDTKKPLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPESSHVGSAIGRIRAVDPDFGE
NAEIEYNIVPGDGGNLFDITTDENTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SVGPFKDTATVKINVLDMDEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDAGSSSIRY
FIDWKNDVDNYFTIDANEGTIATNELLDRESTAQYNFSIIASKVSNPLLTSKVNVIINVL
DVNEFPPEISVPYETSVCENAKPGQVIQTVTATDKDLSPAGQRFSFRLSPEASNKPNFTV
HDYRNNTAGIETRRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTMTIRICRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIVILLVIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEENKMRRDIKPDTLRFPRQRPPVEDNTDIRDFINQR
LQENDVDPTAPPYDSLATYAYEGNGSVAESLSSIESLTTEADQDYDYLSDWGPRFKILAD
MFGEEESYNPDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgcttatccctgcttctctgggtcctgtttgatggaggtctccta
acgccactgcatccacagccacaacagactttagaagcagagccaagagaaaatgttgtc
ccagtgccagggaggaggtcatctgcccagcgagtcaaacgaggctgggtgtggaatcaa
ttttttgtgctggaggagtacatgggctccgaacctcaatatgtgggaaagcttcattct
gatttggacaagggagtgggcactgttaaatataccctttcaggagatggtgctggcact
gtttttactattgatgagaccacaggagacattcatgccataaggagcctagatcgagaa
gaaaaacctttctacacactccgagcacaggctgtggatgttgacaccaagaagccacta
gagcctgaatcagagttcatcatcaaagtgcaggacattaatgataatgagccaaagttt
ctggatgggccttacattgccagcgtaccagaaatgtctccagtgggtgcatacgtgctc
caagtaaaggcaacagatgctgatgatcctacctatggaaatagtgccagagtggtgtac
agcattcttcaggggcaaccctatttctccattgatccaaagacaggtgtgataagaaca
gctttgccaaatatggacagagaagtgaaagaacaatatcaagttcttatccaagccaag
gacatgggaggacaactgggaggactagctggaaccacaactgtaaacataactctcaca
gatgtcaatgataacccacccagatttcctaagagtatctttcatttgaaagtgcccgag
tcctctcatgttggttctgctattggaagaatcagagctgtggatcctgactttggggaa
aatgcagaaattgagtacaacatagttccaggagatggaggtaacttgtttgacatcaca
acagatgagaacacccaggaaggagtcatcaaacttaaaaagccattagactttgaaaca
aaaaaggcatatacctttaaagtagaggcttccaatctccatcttgaccatcgatttcac
tcagtgggtccattcaaagacactgccactgtcaagataaacgtgttggacatggatgag
cctccagttttcagcaagcctttgtatacaatggaggtgtatgaggacactcctgtgggg
acaatcataggggcagtgacagcacaagacctcgatgctggcagcagttcgattagatac
ttcatcgattggaagaatgatgtggacaactactttacaatagatgctaatgaaggaacc
attgctactaatgaattactggacagagaaagcacagcacagtacaatttctctataatt
gcaagtaaagttagcaacccattattaaccagcaaagtcaacgttataataaacgtcctg
gatgtcaatgagtttcctcctgaaatttcagttccatatgagacatctgtatgtgaaaat
gccaagccaggacaggtaatacagactgtcactgccacagacaaagatttgtcaccagct
gggcaaaggttttccttcagactgtcacctgaggcttccaacaaaccaaatttcacagtc
catgactacagaaacaacacagctgggattgaaaccaggagaaatggctacagcaggagg
cagcaagagctgtattttcttccagtggtaatagaagatagcagttaccctgtccagagc
agtacaaacacaatgactatccggatttgcagatgtgattctgatggtactatcctgtcc
tgcaatgtggaagcaatcttcttgccagtaggcctcagtacaggagcactgattgcaatc
ctgttgtgtattgttatacttctagtcattgtagtactatatgtagcactacggaggcag
aagaaaaaggacaccctgatgacctctaaagaagacatcagagataatgttatccattat
gatgatgaaggaggtggagaggaggacacccaagctttcgacattggtgctctgaggaat
cccaaagtgattgaagagaacaaaatgcgcagggacataaaaccagacaccttgcgtttt
ccacgtcagagaccaccagtggaagacaacacagacataagagatttcattaatcaaagg
ctgcaggaaaatgatgttgatccaactgcacccccttatgactccttggcaacctatgct
tatgaaggaaatgggtctgttgcagagtccctcagctctatagaatcccttactacggag
gcagaccaggattacgactatctgagtgactggggacctcgttttaagatcttggcagac
atgtttggagaagaagaaagttataaccctgataaagtcacttaa
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