Tympanuchus pallidicinctus (lesser prairie-chicken): 128091315
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Entry
128091315 CDS
T08967
Name
(RefSeq) LOW QUALITY PROTEIN: neural-cadherin-like
KO
K27892
neural-cadherin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128091315
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Cadherin related
128091315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
EGF
Cadherin_pro
Fibulin_C
hEGF
Y_Y_Y
Laminin_G_3
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
128091315
NCBI-ProteinID:
XP_052560348
LinkDB
All DBs
Position
Unknown
AA seq
2913 aa
AA seq
DB search
MPRLLSSGVKQAVRLFPXLGGTASVSHSSSTLILSPGYPSQRLKRSWGVAMTSLEASHRT
RRRADPASLSPSSLPGVRAGLHVEGLGAAPSQLGAMLGAGGLLLALPLLCGAAAEPGAPR
LPRFSGHVPENSLVQTRVRGARVPLWGPGEPLQRRPGGERGELEARTARRPDRGARTEYR
PLLRAAVRPRAALPRVRVPTRYDRRPRPPPAARLEAAEPSPRGGELARLRASDGDESPDA
PLAYRAWPPGAGGRPLFAVPRGARVPSADSPPASRRLSLWVRPRDRGRPPRPPLAVRGPG
EQRRRLPRSPSPGPRRYSARLPPGARVGDTVFTLPRGRDTDGWFELAAPGAAPLGVDRAS
GRLYLRRELPAGGGAEALVKVHRSAGRDDDWYLCHVTLLAPEEELLSWAMYPYPYLARVD
PDARKGTLVYQLAARYSNSENTSAGVSYTLIAGGEERFQVDVDTGIVMTTGLPLVWNKEY
VVTVQALDEYGNKSPFASISILVGSRPPQFTNMSYSVFVPENTPPGEKVAVVEAVSFQNQ
PLSYSLLTNPSGLFTVRQESGELLLTHPVDYEGEHHLYHLLLKAVEAGSALSSVTEVMVH
ITDENDCSPEFQNSIYSRDSIPETIPIGTSLLQVLATDCDSGPNSEIAYFIQSTDFSITH
HGVINSNQRLNFERANHMYEFVVIAVDKGQPPRTGTASVRIRMANVNDEAPVFSQPIYRT
FLSEDAGPSTLVAAVRAMDPDGDAVLYLIAGGNEEGNFELDSQKGIIKLRRSPVPNLKGP
QYVLNITAIDDNASGGPTPLSSFAEVIVGVNDINNNKPVFRECTYYSDSTWVLENQPPGT
YVLQVEAYDADLGVNGEVKYGLMHRDGASLGFSIDSDTGVITTTQSFDREEQREHTLSVT
ATDQAQEPLIGVCQITVLIADVNDNDPKFENSRYQYFLSEDTPIGTSFLHVTAHDSDQGV
NAAITYSMLAHQVQYFQINPSTGWVYVNHRISQTTRISHYVVATDGGNRSSAVELTVSIT
NALSQPPCWEQSRYWVTIPENTIRDTKIVTIKAMSPLGDPRVTYNLEEGQVPETNMPIRF
YLRPNRADGSASLLVAEPLDFETTKFFSLVVRAQNVAMTPLASFTTVYVNVTDVNDNVPF
FVSSNYEVSVPEGADVGTSVVQVLATDLDSGLHGQVRYFILKDASEDYQFFTIEPETGII
STQASFDREKRASYLIEVQSQDSSKSARPGVHGQPNADTAYVRIFVSDVNDNAPAFPQPV
YEVSVDEDRDVGSPVVTATADDRDEGANAKLRYQITSGNTKGVFDVEPEAGTVFIVQSLD
YEEEQHYELQLVASDGKWENHTLIIINVVNKNDEAPVFTQNEYHGSVLEELTDLPVLVLK
VSAADPDQEADQNSISYSLHGQGAGSEFSIDENTGEISANRRLDREKRSTWQFLVLATDE
SGEGLTGFADVIIEVRDTNDNAPLFLCVSDGCFMGYVPEDSPADTSVMEMTAVDLDDPRA
STNAVLTYRIIQNVQNEINLNLFSINPVSGTIYTMLRSLDREKEDRYLLVVEAIDGGGLA
GTGTATILVTDVNDHAPVFLQRIYTAFVSENASINTEVAVVSAVDRDEGENAMVTFSILD
GDNDHKFSIETDKVNNCGFIHLRKQIDFEKPHERVFNLTVKAEDMDFFSVAHCVIYVEDA
NDHAPVFYPQFYEVVSLAEDVPLGTKVVQVSAVDLDSGLNGRFSFHLLNKSDPGGQFSVA
SDGWVIVAGVLDHETVTQYQLIVIATDMGQPPLACSATVLVTLQDVNDNGPEFEAHYNPV
VWENTASPQSVQMNETSTLLYAKDRDTAANGAPFSFHLLSNFDSLGNFHLQDFHNGSALL
TALRTFDREVHKVFHLPILITDSGIPPMSSTNTLTVNIGDQNDHPHSAGYMECLIYSYDG
ILPTTVLGQVLAPDEDDWDHKIYQFEGKASRYFILNDNSGLLTIKEGTPPGTYNIKVRVI
DGVWPDVVSTVKVIVKEIKDDALHNAGSLQIKDITPEEFISQSPEKESKYNHLKKLLSEI
ISVQLENVHIFSVLKSSQTRGVDVWFAVYGPPYYKTEKLNGNVAASRAWLENILDINITQ
IGIDECVTANCTHSSGCISKYEHSHVPTITTAGSISLVSVTVLRSALCSCAARESPHLSC
SSYQTNPCLNGGTCVDTDLGYRCRCSANFHGPDCQQTKHSFKGHGYAWFPPLKPCFESRI
SLEFITEVADGLLLYQGPVARGQPGQLEDFMALELSGGVPTLTVSHSSGELFLQLSKKVN
VADRRWHNIKIKSDGKAMKLVLDHCINGSVRDSDSVKKISQVDLSACEASEETVGTWSTG
KIFSGHQPLQLGGVKKILPYRDSQERFRGFVGCIRNVVVDTKVYDLEHPAESLNSSPGCI
LTDEMCQSAGMVSCGVHGRCVGDWDFFHCDCAPGYAGPVCDKVLPEWAFGRDSWIHYEPR
NTLSTLSTRIQLMVRTRISRSTLLSLASADGSSFIQLEVDEGYFSVNFSLGDKSHSLRMK
TLRINNGQWVLLTMERYNNEFTLRVNSGGGDQEVTSVLGTNRWFEMDWASVVLGNRLPSH
SESDFQGCLRDVQLNGQPLLVEGRSTEFGFILRRQGVTMGCHSSACSSHPCYSPFLCVDL
WRKYECRCPAGKVEVTDNLTGLRHCTSSPCGHWTCRNGGTCLAQSQDKTICQCPEGYKGR
WCEISQVKAGRPVGLSSGSILAISMCLLVFLALLVSYTVWSQWGSSGFRKGGIYHIPEER
ESWEDVRENVFNYNEEGGGERDQNAYNVDELKKPLHNIPHFSLRATFPYSRTPTGPKIDS
VPNQKQSTSAVSSVLDFKEYVSQIIRDADNDLQNLPADTIHLYCLEGECSLAGSLSSLNS
ISGDEDLNYDFLQEWGSKFDKLKELCEPSHEHL
NT seq
8742 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggttgctttcttcaggtgtcaagcaagcggtgcgtttgtttccctgactcggt
gggacggcttcagtatcgcactcgagcagcaccctaatcctttccccgggatatccctcc
cagagactgaaacgtagttggggcgttgcgatgacctcgctcgaagcttcccataggacg
cggcggcgggcagatcccgcttcactcagcccctcctcgctgccgggggtgcgggccggg
ctgcacgtggaggggctcggagcagcgccaagccagctcggtgcgatgctgggtgcgggc
gggctgctgctggccctgccgctgctctgcggggcggcggcggagccgggggctccccgc
ctgccgcgcttctccggccacgtgcccgagaacagcctggtgcagacgcgggtgcgggga
gcgcgggtgccgctgtggggccccggggagcctctgcagcggcggccggggggcgagcgt
ggggagctggaggcgcgcacggcgcggcgcccggaccggggagcgcggaccgagtaccgc
ccgctgctgcgagcggccgtccggccccgggcagcactgccgcgcgtccgcgttccgact
cgctacgaccgccgcccgcgcccgccgcccgccgcgcgcctggaggcggccgagccgtcg
ccgcggggcggcgagctggcgcggcttcgcgcctcggacggcgacgagagccccgacgcg
ccgctcgcttaccgtgcctggccgcccggtgccggaggccgcccgctcttcgcggtgccc
cgcggcgcacgggtgccgagcgcggactcgccgccggcgtcacgccgcctcagcctctgg
gtgcggccgcgggaccgaggccgtccgccgcgcccgccgctggccgtgcgcggcccgggc
gagcagaggaggcggctgccgcgctcgccgtcccccggaccccggcggtactcggcacgg
ctgcccccgggggcgcgggtgggagacaccgtgttcacgctgccgcggggccgcgacacg
gacgggtggttcgagctggcggcacccggagccgcaccgctcggcgtggaccgcgcgtcg
gggcggctctacctgcggcgggagctgccggccgggggcggcgccgaggcgctcgtcaag
gtgcaccgcagcgcggggagagacgacgactggtacctctgccacgtgaccctcctggcc
ccagaagaggagctcctgtcctgggccatgtacccatacccctacctggcacgcgttgat
ccagatgcgcggaaaggcactcttgtctatcagcttgctgcacgatacagcaacagtgag
aacaccagtgctggtgtatcttacacactgattgcaggtggcgaagaacgatttcaggtt
gatgtggatactgggattgtcatgaccacgggcttacctctggtgtggaacaaggagtac
gtggtcacagtgcaagccttggacgagtatggcaacaagagcccctttgcctccatctcc
atcctggtgggctcccgacctccacagttcactaacatgtcctacagtgtgtttgtccct
gaaaacacaccaccgggagaaaaagtggcagtggttgaggctgtttcctttcagaaccag
cccctgtcctactcgctgctgacgaaccccagtgggctgttcactgtgaggcaggagagt
ggcgagctcctgctcacccaccccgtggactatgagggtgagcaccacctttaccacctc
ctcctgaaagccgtggaagctgggagcgcactgagcagtgtgactgaggttatggtccac
atcacggatgaaaatgactgttctcctgaattccagaactccatttacagcagggacagc
attcccgaaaccattcccatcggcacatctctcctgcaagtgcttgcgacagactgtgac
tctggccccaactcggagatcgcttacttcatccagagcactgatttttccatcacccac
cacggcgtcatcaattctaaccagaggctgaactttgagcgagccaaccacatgtatgag
tttgtggtgatcgccgtcgataaaggacaacccccgcggacaggaaccgcgtcggtgcgc
attcgaatggccaacgtgaatgatgaggcacccgtgttctcccagcccatttacagaacg
ttcctctcagaagatgctggtcccagtaccttagtggctgctgtccgggccatggacccc
gatggagatgcagtgctctatctaattgctggaggaaatgaggagggcaattttgaactg
gatagtcagaaaggtatcatcaagctccgcagaagccctgtgcccaatctgaaaggacct
caatacgtcctgaacatcactgcaatagatgacaatgcctctgggggacccactcctctc
agcagttttgctgaggttattgtaggagttaatgacattaataacaacaagcctgtcttc
agagagtgcacttactacagtgacagcacctgggttctggagaaccagcctccgggcacg
tacgtgctgcaggtagaagcctacgatgcagacctcggtgttaatggagaggtgaagtat
gggctcatgcaccgtgatggagcttccctgggcttcagcatcgattcggacacaggggtc
atcaccaccacgcagagctttgaccgtgaggaacagagggagcacaccctatctgtcacc
gcgacggaccaagcacaggagccgctgatcggcgtctgtcagatcactgttctgatcgct
gacgtcaatgacaacgatcccaagtttgagaacagtcgctaccaatatttcctcagtgaa
gacactcccatagggacgagtttccttcatgtcacagctcatgacagtgaccaaggtgtg
aatgctgccatcacgtattccatgttagcgcatcaggttcagtacttccagatcaatccc
agcacaggctgggtgtatgtgaaccaccggatctcccagacaacacgcattagtcactat
gttgtagcaacggatgggggcaacaggagcagcgccgtggagctgaccgtaagcatcacc
aatgcgctcagccagccaccctgctgggagcagagcagatactgggtaacaatccctgaa
aacaccatccgtgacaccaagatagtgaccatcaaggccatgtcccctcttggtgatccc
agggttacgtataacctggaagagggtcaagttccagagacaaacatgccaattcgtttc
tacctgaggccaaatagagctgatggatctgcttctcttcttgttgctgaaccacttgac
tttgagacaaccaagttcttcagcctggtagtccgggcacagaacgtggcgatgactcct
ctagcttcctttaccactgtttatgttaatgtaacagatgtcaacgataatgttccattc
tttgtgtcttccaactatgaggtgtctgtgccagaaggagctgatgttggcacatcggtg
gttcaggttttagcaacagacttggattcaggtcttcatggacaggttcgctattttata
ttgaaagatgctagtgaggactaccagttcttcaccattgaacctgagacaggaattatt
tccacccaagcatcgtttgacagagagaaaagagcctcttatttgattgaagttcaatct
caggactcttcaaaatctgccagacctggtgtccatgggcagcccaacgcagacacagcc
tatgtaaggatttttgttagtgacgtgaatgacaatgccccagcatttcctcagccggtg
tatgaggtcagcgtagatgaagacagggatgttggaagtcctgttgtgacagcaacagca
gatgatcgagatgagggtgcaaatgccaaactcaggtatcagatcacatcaggaaacaca
aaaggtgtttttgatgtggaacctgaggctggtactgtcttcatcgttcagtctctggat
tatgaagaagagcaacattatgagctccagctcgtagcatctgatggaaaatgggaaaat
cacactcttatcatcatcaatgttgtcaataagaatgatgaagcaccagtcttcactcag
aatgaataccacggcagtgtcctggaggagctcacagatctgcctgtacttgttctaaag
gtgtctgcagcagaccctgaccaagaggcagatcagaattctattagctactccctgcat
ggacagggagctgggagtgaattcagcatcgatgagaacacgggtgagatcagtgcaaac
agaagattggaccgtgagaaacgatcaacgtggcaatttcttgttcttgcaacagatgag
agcggagagggactgactggctttgcagatgtgatcatagaagtgagggacacgaatgac
aatgcacccctttttctctgtgtgtcagatggttgtttcatgggttatgtccctgaggat
tccccagcagacacgtctgtcatggagatgacagcagtggacctcgatgacccaagggcc
agcacgaatgctgtgctaacataccgaatcattcagaatgtccaaaatgaaattaacctg
aacttgttttcaattaaccctgttagtggcaccatctataccatgctcaggtccctggat
cgggagaaggaagacaggtacctattagtggtcgaggccatagacggaggaggactcgct
gggacaggcactgccactattctggtgactgatgtaaacgatcacgctccagtcttccta
caaaggatctacacagcgtttgtctctgagaatgcaagcattaacactgaggttgcggta
gtgtctgctgtggacagagatgagggagaaaatgccatggtgacattcagcatccttgat
ggcgacaatgaccataagttctccatagagacagataaagtcaacaactgtgggtttatc
catttacgaaagcagattgattttgagaagcctcatgagagggtgtttaatttgaccgtg
aaagcagaggacatggatttcttcagcgttgctcattgtgtcatctacgtggaggatgcc
aacgaccatgcccctgtcttctacccccagttctatgaagtggtatctctggcagaagat
gtgcctctaggcaccaaagttgttcaagtttctgctgttgacttggattctggcctgaat
ggaaggttctctttccatctgctaaacaagtctgacccaggtggccagttttctgtggct
agtgatggctgggtgatagttgcaggagtgctggatcacgagacagtgacacaataccag
ctcattgttattgccactgatatggggcagccccctctggcttgcagtgccacagttcta
gtgactctgcaggatgtaaatgacaatgggccagagtttgaggcccattataacccagtg
gtctgggagaacacagcttctccacagtctgtccaaatgaatgagacctctactttgctg
tacgcaaaggatcgtgacactgctgctaacggagcacctttctcctttcatttactcagc
aatttcgacagtcttggtaacttccacttgcaggatttccacaatggcagtgccttgctc
actgcactgcgtacctttgacagggaagtgcacaaggtattccacctgcccattctgatc
acagacagtgggattccacccatgagctccaccaacacattaactgtgaatattggggac
caaaatgatcacccacattctgctggctacatggaatgtctcatctacagctatgatggt
atcctgcccacaaccgtcttgggtcaagtccttgctcctgatgaggatgattgggatcat
aaaatttaccaatttgaaggaaaagcatcaaggtactttatccttaatgataactcgggt
ttgctaactattaaagaaggaaccccaccaggaacatacaacataaaggttagagtcatc
gacggtgtttggccagatgttgtctcaactgtaaaggttatagtgaaggaaatcaaagac
gatgccctccataatgctggttctttacaaatcaaagatatcactccagaggagttcata
tcccaatcccctgaaaaagagagtaaatacaaccatttgaagaagctgctctcagaaatc
atatcagtccagcttgaaaatgttcacattttcagtgtgctaaagtcaagtcaaacacga
ggggttgatgtttggtttgcagtttatggccccccctattataaaacagaaaaacttaat
ggcaatgtagcagcttccagagcatggctggaaaacatcttggatataaatatcacccag
attggcattgatgaatgtgtgaccgcaaactgcactcatagcagcggatgcatcagcaag
tatgagcacagtcatgtgccaacgataaccacagctggaagcatttcactggtgtctgtg
acagtcctgagaagtgccctgtgtagctgtgcagctcgggagagtcctcacctctcttgt
tcctcttaccagacaaacccgtgtctgaatggcggcacgtgtgtggatactgatttgggc
tacagatgcagatgctctgctaattttcacggaccagactgccagcaaacaaaacacagc
tttaagggccatggctatgcctggttccctcctcttaagccttgctttgagagtcgcatc
tccttagagttcatcactgaagtcgcggatggcctcctgttgtaccagggaccagtagca
cgagggcagcctggacagctggaagatttcatggctttggagctgtctggtggtgttcca
acactgactgtcagccatagctctggtgagcttttcctccagctttccaaaaaagtcaat
gttgcagatcgccgctggcacaatataaaaattaaaagtgatggaaaggcaatgaagctg
gttcttgaccactgcataaatggctcagttagagacagtgacagtgttaagaagatctct
caagtagatctgtctgcctgtgaagcctccgaagagactgtgggaacttggagcacaggc
aagatcttcagtggtcaccagcccctacagctgggtggagttaaaaagattttgccttac
cgcgactcacaagagcgcttcagagggtttgttggctgcattcgcaatgtcgttgttgac
actaaggtttatgacttagagcaccctgcggagtccttgaacagctctccaggatgcatt
ctcacagatgaaatgtgtcagagtgctgggatggtctcctgtggtgtccacggccggtgt
gttggtgactgggacttctttcactgtgactgtgccccaggatatgctggaccagtgtgt
gataaagttcttccagaatgggcttttggaagggacagctggatccattacgagccaagg
aataccctcagcactctcagcactcggatccagctgatggtgcgcacccgcatctcccgc
agcacactgctcagcttggcctctgcagatgggagcagcttcatccagctggaggtagat
gagggctacttttctgttaacttcagcctgggggacaaaagtcactctctgagaatgaag
acgttacgtataaataatggccagtgggtcctgctgaccatggagcgctacaacaacgag
tttactctgcgtgtcaacagtggtggtggggatcaggaagtgacatctgtcttgggcaca
aataggtggtttgaaatggactgggcaagtgttgtgctaggaaaccgccttcccagtcat
tcagagagtgatttccaaggttgtttgcgtgatgtccagctcaacggccagccactactt
gtggaaggcaggagcacagagtttggcttcattctgaggcggcagggtgtcacgatggga
tgccattctagtgcctgcagcagccatccctgttacagccctttcctttgtgttgatctc
tggagaaaatatgaatgccggtgtccagctgggaaagtggaagtgactgataatcttaca
gggctcagacactgtacctcatcaccttgtggacactggacgtgtaggaatgggggtacc
tgtctggctcaatcccaagacaagactatctgccagtgtcctgaaggctacaagggaaga
tggtgtgaaattagccaggtgaaggcaggaagacctgttggactcagctctggctctatt
ctggcaatcagcatgtgtctccttgtctttctagctctcttagtttcctatacagtgtgg
agtcagtggggaagttcggggtttcggaaaggaggaatttaccacattcctgaggagcgt
gaaagctgggaggatgttagagaaaatgtcttcaactataatgaagaaggaggtggagaa
cgcgaccagaatgcttacaatgtagatgaactgaagaaacctctacataacattccccac
ttctccttgagggcaacatttccatattccaggacacccactggaccaaaaatagactca
gtcccaaaccaaaaacaatcaacgtcagctgttagcagtgttctggacttcaaggaatat
gtttctcaaatcatccgggatgcagacaatgatctacagaatcttccagctgacactatt
catttgtactgcttggaaggagaatgctctctggcagggagccttagctccttaaactcc
attagtggtgatgaagatctaaattatgacttcctccaagagtgggggtcaaagtttgat
aagcttaaagaactctgtgagccctcgcatgaacatttgtaa
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integrated database retrieval system
