Tympanuchus pallidicinctus (lesser prairie-chicken): 128091375
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Entry
128091375 CDS
T08967
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128091375 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128091375 (TAF4B)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128091375 (TAF4B)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128091375 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
128091375 (TAF4B)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128091375 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
128091375
NCBI-ProteinID:
XP_052560416
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MSAPAAAAAPVRLMPGGHPEQPPAGSPAGGPAPACGSPAAKVSGCTAPSAPSAGPPAMRA
AAAGGPRPLVVPKGPPTATIQLPANFQLPPGTVLIRSSNGQLMLVSQQAIARAQPQPQNN
TSVRVSVPSSTPAVRICAVQNSGTQLIKKAVPTPLKPLSQTTNAVTSTVQSPAVMQPAAA
AASVTAVTAVKPLSTGTPVKLPVTGPPAQSISQKAVSVKAEGTTVAQTSTSTEMLENVKK
CKNFLATLIKLASSSGPQATEMGQNVKNLVQNLLEAKIEPEEFTKKLYVELKSSPQPYLV
PFLKKSMLALRQLMPNAQSFIQQCMQQPAPTQEAISTCASALTPSTAVVTSPVATNSLPV
IKPVSASTTVTAAPVIKPVLSSASVTASLQAMKPVPASAVVTASLRPAPSVLTTTISKSG
LTAIQTVKPVFTSAVATSSLQSVKPVLVSTVAPSAATPLQPLKPVMGTPISIKISQPNSI
VAQPVATQQVVKVKQLVVQQPPGTIVKQVSTLPQSSTLTLQTPVEKRMPLNTLVQTNQFP
AGSVLKQVTLPGNKILSLQASPLQKTKIKENGTTSFRKDEDDINDVTSMAGVNINEESAC
ILATNSELIGTVIRSCADEPFLFSEALQKKILNIGKRHDIMELNSDVVNLISHATQERLR
GLLEKLTVIAQHRVSTHKGSDTYIVSSDTRAQLKFLEKLDHLEKQRKDEEEREMLLRAAK
SRSNKEDPEHLRLKQKVKEMQQLELAQMQQREANLTALAAIGPRKKRPLDSSNAGSGMEG
LNSNGIAPGSSNFSLTKQLLRPRITRVCLRDLIFCMEQEREMKHSLTLYRALLK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccggcggcggcggcggcccccgtcaggctgatgcccggcgggcacccggag
cagccgcccgccggctctcccgccgggggcccggctcccgcgtgcggcagccccgccgcc
aaggtgtccggctgtacggcgccctccgctccctccgcggggcccccggcgatgcgcgcg
gctgctgcggggggcccgcggccgctggtggtacccaaggggccgcccaccgccaccatc
cagctgccggccaacttccagctgcccccaggaactgttcttatcagaagcagtaatggt
caactgatgctagtatctcaacaagcaatagcacgagcacaacctcaaccacaaaataac
acaagtgtacgagtgtctgtacctagcagcacacctgcagtgagaatatgtgctgtacag
aactctggaacccagttaataaagaaagcagtacctactcctttgaaaccattatctcaa
acaacaaatgctgtgacttctactgttcagtcacctgctgttatgcagccagcagctgca
gcagctagtgttactgcagttactgctgtaaagcctttgagtactggaacacctgtaaaa
cttccagttacaggaccacctgcacaatccatctcccaaaaggcagtctctgtgaaagca
gagggcacaacagtagcacagaccagcacttctacagagatgctagagaatgtgaagaaa
tgcaagaatttccttgctacgctaataaaactggcatctagtagtggacctcaagccact
gagatggggcagaatgtgaagaatctggtgcaaaatctattggaagcaaaaattgaacca
gaagaatttacaaagaaactgtatgtagagctcaagtcttctccacagccctatttagtt
ccttttctcaagaaaagtatgcttgccttacggcagctaatgccaaatgctcagagtttt
atccagcagtgtatgcagcagcctgctccgacccaagaagccatttcaacttgtgcttct
gcactaactccttccacagcagtggtaacctcacctgtagcaaccaattctcttcctgtt
ataaaaccggtgtctgcctccacaacagtcacagccgctcctgttataaaaccagtcctt
tccagtgcatcagtgacagcctctctgcaggctatgaagcctgttcctgcatctgcagtg
gtgacagcctctcttcgtcctgcaccttctgtcctcaccacaacaatatcgaaatcaggg
ctcactgctatccaaactgtaaagccagtctttacctctgcagtagcaacatcatctctc
cagtctgtaaagccagtgctcgtctctacagtggcaccctcagcagcaacccctctccag
cctttgaaacctgtcatgggcacccccatcagtattaaaatctcacagcccaactccatc
gttgcacagccagtggccactcagcaggtggttaaagtgaaacagttggtagtccaacaa
ccaccaggaaccatagtaaagcaagtatccacacttccacagtcctcaacactgactctt
cagacacctgttgagaagagaatgccactgaatacgcttgttcaaacaaaccaatttcct
gctggctctgttctgaaacaagttaccctgccaggaaataaaattctgtcgcttcaagcg
tctcctcttcagaaaactaaaataaaagagaatggaacaacatccttcagaaaagatgaa
gatgacataaatgatgtgacttccatggctggagtcaacattaacgaagagagcgcatgc
attctggccacaaattcagagctcattggtactgtgatccgctcttgtgcagatgaacct
tttctgttttctgaagcacttcagaagaagattttgaacatcggtaaaaggcatgacatt
atggaacttaactctgatgttgtgaacttgatctcccatgctacacaggaaagattacga
gggctcctagaaaaactaactgtaattgctcagcacagagtatcaacccataaggggagt
gatacatacattgtatctagtgacaccagagcacagctaaaatttcttgaaaagcttgat
cacctagaaaagcaaagaaaggatgaagaggaacgtgaaatgttgctacgagcagccaag
agccgttccaataaagaagatccagagcatctgcgtttaaagcagaaagtgaaagagatg
caacagttggaattagcacaaatgcaacaaagagaagctaacctcacagctttggcagcc
attggaccaaggaagaagagaccactggattcatcaaatgctggatctgggatggagggt
ttgaacagcaatggaattgctcctgggtcatcaaattttagccttacaaaacagcttctt
cgtccaagaataactcgtgtctgtctcagggacttgatattctgcatggaacaagagagg
gagatgaagcattctctaaccttgtaccgtgctcttctgaagtga
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integrated database retrieval system
