Tympanuchus pallidicinctus (lesser prairie-chicken): 128091377
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Entry
128091377 CDS
T08967
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128091377 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128091377 (SS18)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128091377 (SS18)
GBAF(ncBAF) complex
128091377 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
128091377
NCBI-ProteinID:
XP_052560423
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMSSDGLVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQAGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPQQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttcgcggccccccggcagcgggggaagggcgagatcacgccggccgcc
atccagaagatgctggatgaaaataaccaccttattcagtgtataatggactaccaaaac
aaaggaaagacatctgaatgctctcaataccagcagatgctacacacaaacttggtttat
ctagctactatagctgactccaaccagaacatgcagtctctgctaccagcaccacccaca
cagaatatgcctatgggtccaggagggatgagtcagagcggcccccctccacccccgcgc
tcgcacaacatgtcttcagatggactggtaggtgggggccctcctgcgccacacatgcag
aaccagatgaacggccagatgcctggacctaaccatatgcctatgcaaggacctggacct
aaccaactcaatatgacaaacagttccatgaacatgccttcaagtagccacgggtcgatg
ggcggctataatcactcagtgccatcctcacagagtatgccagtgcagaatcagatgacc
atgagccagggacagccgatgggcaactatgggcccagaccaaacatgaacatgcaacca
aaccaaggtccaatgatgcaccagcagcctccttcccagcaatacaatatgccacaagct
ggtggccagcattaccaggggcagcaaccacctatgggaatgatgggccaagttaaccaa
ggcaatcacatgatgggtcagagacagattcctccatacagaccgccacaacaaggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcacagtatggtcagcagcaagatgcatatcaagggccaccc
caacaacagggttatccaccacaacagcagcaatatccaggccaacaaggctatcctgga
caacagcagggttatggcccttcgcagggtggccctggacctcagtatcccaattatcca
caaggacaaggccagcagtatgggggatacagacccacacagcctgggccaccacagcca
ccacagcagaggccttacggatatgaccagggtcagtatggaaattaccaacagtga
DBGET
integrated database retrieval system
