Tympanuchus pallidicinctus (lesser prairie-chicken): 128091585
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Entry
128091585 CDS
T08967
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128091585 (TRPA1)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128091585 (TRPA1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
DUF5685
Motif
Other DBs
NCBI-GeneID:
128091585
NCBI-ProteinID:
XP_052560853
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MKRSLWRLCQSREKAAASSAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIEDSSSEVLNVMDASGNTPLHWATRKNQVESVS
LLLSRGANPNILNSNMMAPLHMAIQSLHNEIVKILVQHSSTDVNLEGEAGNTPIMVACHK
DNPEALILLIENGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGDESIIDAVDGNKETLLHRTALFDHYELADYLISMGANIDSVDTEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKFLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAKEGHAKAVRLLLDYGAKILLNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVLTFSHYSSANKCPLLEMIEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKLKEGEDIFYEPLAILNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRSLNGTEIYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYSTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSNELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTDAQSTDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHRNSKWDTVLKAVKSNVPNPCAEKNSTFL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgtggcggctgtgccagtcgcgggagaaggcggccgcgtccagcgcc
taccagggcgtcgtctgcgaggcagatgccgcttccgtcgcctcgcaggatgtcttcaag
gtgatttcggatggaagtgcctgtaggctgcgaagcttcattaagaagaaccgttccggt
ctcaccaaagtggatgaattaaatgcaaccccactgcatcatgctgctgaaggaggccaa
atagaattaatgcagttgattatagaagattcttcctctgaagtgttaaatgtgatggat
gcttctggaaataccccactgcactgggctacaaggaaaaaccaggttgaaagtgttagt
ttacttctcagtagaggagccaacccaaacattctcaactccaatatgatggcacctttg
catatggctatacagtctctgcataatgaaattgtcaagattttggtccagcatagcagt
acagatgttaatttggaaggtgaagcaggaaacacacctataatggtagcatgtcataag
gacaatcctgaagcactaatactcctgattgaaaatggaggaaaaatatgtaaaccaaac
aaaacggggtgcatgcctatccatgctgctgcattttcaggagcaaaaacatgtatggaa
atccttttaaaaaaaggtgaagaattgggtcactctgctaaaactcacattaattttacc
aataatgggaagtgcagtccacttcatttggcagttcaaagtggagacttggaaatgata
aaaatgtgcattgaatttggagcccaaattgatctaaaacagaatgaaaaatgcactgca
cttcattttgctgccactcaaggagcaactgaaattgtaaagttaatgatgtcatcctat
gctggtgatgaatccattattgatgctgtagatgggaataaggaaacactgcttcacagg
acggccttgtttgatcattatgaactggcagactacttgatttcaatgggagcaaatatt
gatagtgttgacacagaaggtcgatctccacttctgttggccacttcttgtgcatcatgg
aaaattgtgaatttactgctctcaaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcacttgacggtattacagcctggaggattacaacatctgaatgagaaa
tttctgcagatggagcatattaaaaatctcgtggtggatgaagataacgaaggatgcact
ccactgcattatgcatgcagacaaggtgtggccctctctgtaaataatttactcagcctc
aatgtttccatttattcgaagagcagagacaagaagtcaccattacactttgctgccagc
tatggccgcatcaatacatgccaacgacttataagggatatgaaagacacaaggctttta
aatgaaggtgataagaagggaatgactccccttcatttggcagcccagaatggtcatgag
aaggtcgttcagtttcttctgaaaagaggggccctttttctctgtgactataaaggctgg
acagccctgcatcatgctgccttcggaggatacactcgcacaatgcagataatattggat
actaatgtgaagtgtactgacagagtggatgaggaagggaacacagctttgcacctagct
gcaaaagaagggcatgcaaaagcagtaaggttacttcttgactatggtgcaaaaattctg
ttgaacaaagcagtagcttcttttttccacgaagcaatacacaacagaaggaaagatgta
gtgtcagctgtcattttgcataaaagatgggaagaagctgttctgacattctctcactat
tctagtgccaataaatgtcctttactggaaatgattgagtatcttcctgattcatttaaa
cttgttttggacaactgcataattgagtcttcagaggaaaagacaagtcgagatttctat
attgaatacaacttcagatatcttcagtgtcccctgacacttaacaagaaattaaaggaa
ggtgaagatattttctatgaaccgcttgccattttaaatgccatggtacggcacaatcgc
atggagctacttagtcatcccgtgtgcaaagaatatttgctaatgaagtggatggcttat
ggttttcgagcgcatctaatgaatttaggcatttattctcttggtttgataccattgact
cttctggtcacccacatacagccaggaagatctttgaatgggacagaaatctatgaagct
agaccattagaatatgaggactcatacttcacaagagtgtgtatgtgtttagttttaatt
atgagtttactgggaatttgcaaagaaatatttcagctcattcagcagaaattgaaatat
ttgttggattactccaatctattggactggacaatttatagtacaagcataattttcgtg
tcttctttatttattaacacaccagctcatttgcagtgggaatgtggagcaattgctgta
tacttgtcttggatgaacttcttgctttatcttcagcgatttgaaaattatggcatttac
gttgtgatgttctgggaaattctgaggactttgattcggatcgcggtcgttttctttttc
ctgatattggcctttggactgagtttctttgtccttttgggttctcagcaaacatacagc
acgccactgctttctgtaatgaaaacatttgcaatgatgctgggagacataaattatcac
gatgcattccttgatccattactgagcaatgaattgccatatccgttcctgagttacaca
gttctgattatatttactttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggggacatagctgaagtgcaaaaatatgctgccctcaaaaggattgcaatgcag
gttaatcttcacacaaacttagagaagaagctgccattttggttcctaagtcgagtggac
caggaatcaatcacagtctatcctaacagaccacgatactgtggatttatgagtgtattc
cagtattgctttgggtgtgaggactctaccacagatgcacagagcactgatacaacatta
gaattggaagttctgaagcaaaaatacaggctcaaagatatatcgacgctgttggaaaag
caacacgacctcattaaactgattatacaaaaaatggagatagtgtcagaggctgaggat
gaagacagcaatgatttatttcagcacaagtttaggaaaaggcagttagaacataggaat
agtaaatgggatacagtgttaaaagctgttaaatcaaatgtgcctaacccatgcgcagaa
aagaacagcaccttcttgtag
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