Thrips palmi (melon thrips): 117638935
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Entry
117638935 CDS
T08251
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117638935
09123 Folding, sorting and degradation
03018 RNA degradation
117638935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117638935
03041 Spliceosome [BR:
tpal03041
]
117638935
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117638935
mRNA degradation factors
5'-3' decay
Lsm complex
117638935
Spliceosome [BR:
tpal03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117638935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
117638935
NCBI-ProteinID:
XP_034230057
UniProt:
A0A6P8Y8L3
LinkDB
All DBs
Position
Unknown
AA seq
112 aa
AA seq
DB search
MSASSNQAQGGDQKEKKRKESILDLSKYLEKNIRVKFAGGRECAGTLKGYDPLLNLVLDN
TTEYLRDPDDPYKLMEDTRMLGLVVCRGTTVVLICPVDGMESIANPFVAQDG
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgagctctaaccaagcgcaagggggagatcagaaggagaagaaaagaaaggag
agtattcttgacctttctaagtacctagagaagaacatcagagtgaaatttgctggaggt
cgtgagtgcgcgggaactttaaagggttacgatcctctattgaatcttgtcctcgacaac
accacagaatatttaagagatcctgatgacccatacaaactgatggaagacacccgtatg
cttggcctggttgtatgtagaggaacgactgttgttctaatctgccctgtagatggaatg
gaaagtattgcaaatcctttcgttgcacaggatggttga
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integrated database retrieval system
