Thrips palmi (melon thrips): 117638945
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Entry
117638945 CDS
T08251
Name
(RefSeq) protein fem-1 homolog CG6966
KO
K25805
protein fem-1 homolog A/C
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117638945
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
117638945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
TPR_10
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
117638945
NCBI-ProteinID:
XP_034230076
UniProt:
A0A6P8Y243
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MDNLDLEDPSDLNVVFNSARDGNLRRLKGYIGDCEQDEIPMLVSARNNGATPLLMACRNG
HFDVAEYLIEHCHADIEQRGSVVFDGETIEGAPPLWCAAAAGHFRLVMLLLNHGARVNST
TRSNSTPLRAACYDGHYSIVHTLIEHGADFEIANRHGHTCLMIACYKGHKAIANFLVSLG
ADVNRRSVKGNTALHDCAESGSLDILILLLSHNAKMDVDSYGMTPLLTASVTGHAHVVQY
LIEQENLVSQKEKVDALELLGATYVDKKRDMVGALNYWKSAMNERYNGRNELPKPFQKST
VEAYDHVKEIREPHQLDDLLSDPDEMRMQALVIRERILGPAHPDTSYYVRFRGAFYADTG
QFGRCVSLWGYALDMQQRMLEPLNPMTQSSFFSFTELFSYMMGEEGRIPARGRRVPPVSF
NDLITVFDKAVKEVEMGNALVEKLPAAERDLTYLHRVIVICLHLACLLTRLLPTLSEAES
FHLHKSTYRLVHLGVRGRRGRSVLHLVCSRDSALVGRYPACQFPSPALADLLLTVGADVN
AKDEDGNTPLHASGSFHDFSQHLPRILLAHGAHLDYVNNYGNTLEDLLAKRGQPLNRIVN
PMQYTRLTCLAARVIQKHKLQYVGIVPKSLESFVQNH
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggataacctggacctagaagatccgagcgatctgaacgtcgtgttcaactccgcacga
gacggcaacctgcgacgcttgaagggatacatcggcgactgtgagcaagatgaaatcccc
atgctggtgtcggccagaaacaatggtgccactcctctcctcatggcatgcaggaatggg
cattttgatgtggccgaatacctcatcgagcattgtcacgcggacatcgagcagcgagga
tcagtggtgtttgacggggagaccatagaaggtgccccacccctgtggtgcgcggcggcg
gctggccactttcggctagtgatgctgctgctgaaccacggggcgcgagtcaacagcaca
acgcgcagcaactcaacgcccctcagggccgcgtgttacgacggacactattccattgtg
cacacacttatcgaacatggagcagattttgagattgcaaatcgacatggtcacacatgc
ttgatgatcgcatgttacaagggccacaaggcaattgccaactttttggtttcccttgga
gctgatgtgaacagacggagtgttaaagggaatacagctttgcacgattgtgctgaatcc
ggatcattggatatcttaatactacttttgagtcataatgcaaaaatggatgttgattca
tatggtatgactcctttgttaactgcaagtgtaacagggcatgcacatgtagttcagtac
ctgatagaacaagaaaatctagtatcacagaaagagaaggtagatgccctggaactactt
ggagccacatatgttgataaaaaacgagacatggtgggagcattaaactactggaaatca
gcaatgaatgaaaggtacaatggtaggaatgagcttcccaagcctttccaaaagtcaact
gttgaagcctatgaccatgtgaaggaaataagagaacctcaccaattagatgacttactc
tctgacccagatgaaatgaggatgcaagctcttgtaatacgagagcgcatccttggtcca
gcacatcctgacacatcttattatgtgcggtttcgaggtgcattttatgctgatacaggc
caatttggcagatgtgtgtcattatggggctatgcattagacatgcagcaaaggatgctg
gagcctcttaatccaatgacccagagctctttcttttcattcacggaactattctcatat
atgatgggggaggaagggagaataccagcaagaggcagaagagttcctccagtttccttt
aatgatcttataactgtctttgacaaggctgtaaaggaagtagagatgggtaatgcttta
gtggaaaaactgcctgctgcagaaagagacttaacttatttacacagagtcatagtgatc
tgtttacaccttgcctgcttattgacaagattattaccgacattaagtgaagctgaatcc
tttcatttgcataaatcaacttataggctagttcacttaggagtgcgtgggcggcgcggg
cgctctgttctgcacctagtctgttctcgggactcagcacttgttgggcggtatccagct
tgccaatttccaagtcctgctttggcagatcttttattaactgttggtgctgatgttaat
gctaaggatgaagatggcaacacacccttgcatgcttcagggtcattccatgatttttct
caacaccttcctcgaatacttttggcgcatggcgctcatcttgattatgttaataattat
ggtaatactcttgaagacttattagcgaaaagagggcagcccctcaatagaatagttaat
cctatgcaatacacccgtctgacttgcttagcggctcgtgtgattcagaagcacaaattg
cagtatgtaggtattgtacctaaatctttagaatcgtttgtacagaaccattga
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