Thrips palmi (melon thrips): 117639273
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Entry
117639273 CDS
T08251
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpal03036
]
117639273
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117639273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
117639273
NCBI-ProteinID:
XP_034230674
UniProt:
A0A6P8ZGT7
LinkDB
All DBs
Position
Unknown
AA seq
2103 aa
AA seq
DB search
MNGEIPSVPITTLAGISSLTDLLPEMPLPSPLPLSSKSLLFHPRVAEEAQNLLSVRDESL
VPQLIQSLSQTSSQHIELKDHYAGTEPPVEQQQNIPELLKAILHRNPNVFKGPPANSSTP
VWNQNFNCNDSSPASYSQESPNISYSGLATGQFPQDQVPGPVPVPIPPPDPGPHQRVSVI
TEQYKPPIVHNNFEANDLASAVKDESSLLQAPPRSGGVQGDLPNSTQEPSSIPRTNAMQI
AGSSPAQASTAPVTQEQDKSKLLSGRHSRRTNSVNSNSNADAKVTGESSSSLPASVQIPD
IMKLKDLKEPVVRLNRLSEEDQALMQKSLKAFAEKSPSLANQLGILSPPSSNHRSAHNST
SYKEDSGSDSDEPLQKSKYFKSRDKEREEKRLKEKDSRKKARAADSDNEYVPDDDSAPQS
MRKRRHANSNDGGNPVDDFVPKTKLRKVERKLAPAAEKLSVEELMETNTYQRFSRSIDLV
FDNTEDLDLNTEMEDDADVPPEALIPKYQLQELCGEAAKLKNLGAMESFPADRLVRLLNI
LEKNIRDGVRVCPLADPDEDEEESKLWLELAMERVMRAVDASLTSMYILTSPNMPKRIYL
EDVIDRVVVFCKFQLVNTIYPSFDPVYRVENKAKSSKDDHPGSGRKKKEKHHSSHVKDKS
IQTLYNKLHELVGLLSELLNVQVLTDTTVLHASSLGVGPFFVEGVSELQLSALRLVTSIF
TKYDKHRRLLLDDILASIARLPSSKRSLRTYRLSSDENIQMLTALVLQLIQCVVVLPETL
QDQLMASAPKAKDGKAKSSKEEEKKPEIVSNCDRDVFIAGKYDTAMRTAANFLSVFLNKC
GNKSEEIDYRPLFENFVQDLLTTVNKPEWPAAELLLSLLGTLLVTNFVNKGTDMALRVAS
LDYLGVVAARLRKDAVQSQLKVDHIDQIIREIKAEELKEEDGSSSSKSSKQGKGCELDEE
EERNQFLQRVLLDYLAVNGHNDQALIYARHFYLAQWYKDASSDRRKSPSKSPSKKKNQRG
RKKRKDESSEEETEPSDDDDDDEDKDEGLNDTAQTNSEKFRLTEIRKNFLVSKIRPFQDS
TNSGSRQQVMQTYLDYTSAELISRFLASKRPFSQSFDMYLKQILRVLTESSIAIRTKAMK
CLTMVVEADPAVLGRVDMQLGVRHSFLDHSTSVREAAVDLVGKFVLSRPELIDKYYEMLS
ARILDTGVSVRKRVIKILKDICIECPDFPKIPEICVKMIRRVNDEEGIRKLVMEVFQNMW
FTPVRERPSLDTVSLIRKVMNITDVVATSRGIGMEWFEQLLVSLFRPREDKEDSTKVHAE
PPKALLTACKQIVDCLIENVLRLEESSNTQNKGSSQRLVACLTTLNLFAKIRPQLLVNHA
ITLQPYLSLRCQTQGDYQIISCVARTLELVVPLMEHPSETFLAQLEEDSVKLILQHDRSV
VASCLSCLGSVVNNVTRNFKLIRDCFNKYYSVMRDVKEKDLFLKQSAASQQTRPYVRRAL
FTVGLLLRHFDFTNKDVIEGLDEDIKNQVFETLIYFVKLDDKDIQIYTLRAIGSLCIRHY
DFMLQSDLKALYHGLLTGADAPLQMKVQVLNNIEMYLEEEEQRMIRQDQEWAKMSKSENL
KEMGDVTSGMASTVIQLYLKEIMDAFLNPDVSVRHAALKVIQLILAQGLVHPVQIVPYLI
CMSTDMEKVVSHSADKQLQDIEKKYPGFIHMKSQLGIRLSFKLHCILQQGPKGEYVPVRG
HRQIEGEPLPTALNGFLYSILRSTKQQRRALVLSILKQFDEQTKTSLSQMLYYADNLAYF
PYQVQDEPLFIIHHVDIMISVAGTNLMQTFKEALIPLNNQVQRLNLETGQPELVSLPEPD
EDDEEDADALLARMPQDTSVLQDVITAFQGCLLLLVLKQHLKDLYGFTDAKITQYSPSEA
AKVYEKAVSRKSNAVFNPKATLAKLKEGSSQEILDQAQRKAIITQYLDFKQMMLKFDPDD
AEEDEEGSPGKSGTPGRADNAGGTPYQQEGIVPPITLTINASHGDNSPDKVRINNVQSAD
GTPQRIPKLTIVAPKRSEIKERHHRKSHKSDKHKKHRHKKKRKKNGGGSDEDSDDFSDPD
FLV
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgaaatacctagtgtacctatcaccactttggctggcatctcaagccttact
gacttgttgccggagatgcccttgccctctcctctacctctgagcagcaagtccctactt
tttcaccctcgagtagcagaagaggcccagaatctcctcagtgtgcgtgatgaatcactg
gttcctcagctaattcaatctttaagtcaaacttcatcacaacacatagaactaaaggat
cactatgctggtacagaacctccggttgaacagcagcaaaatattcccgagcttttgaag
gcaattcttcacaggaatcccaatgttttcaagggaccaccggctaattcatccactcct
gtatggaatcagaatttcaactgtaacgattcatccccagcaagttacagtcaggaatcg
cctaatatatcctactccggtttagcaactgggcagttccctcaagatcaagttcctgga
cctgtgccggttcctattcctccaccagatcctggtcctcatcaacgagtgtcagtgata
acagaacaatataagcctcctatagtgcataacaattttgaagccaatgacttagctagt
gcagtaaaggacgagtcgtcactgttacaagcacctcctcgaagtggtggtgttcaggga
gaccttccgaacagcacacaggagccctcaagcattccccgcacaaatgctatgcaaata
gcaggttcctctccagctcaagctagtacagcgccagttacccaagaacaggataaatct
aagctgttgtctggaaggcacagtcgaagaaccaattctgtcaattcaaattccaatgcg
gatgctaaagtaactggcgaatcatcttcctcgctgccagcatcagttcaaatacctgac
atcatgaagctgaaagatttgaaagaacctgttgttagattgaataggttatcagaggag
gatcaggcgttgatgcaaaaaagtctgaaagcttttgctgagaagtcaccatctttagca
aaccaacttggcattttatctccaccctcatctaatcaccgttcagcacataattcaacg
tcttataaagaagactctggatctgacagcgatgagcccctccaaaagagcaagtatttt
aaatcaagagacaaagaaagggaagaaaagcgactcaaagagaaagatagtcggaagaaa
gctcgtgctgccgattcagataatgagtacgtcccagatgatgactctgcgcctcaatca
atgcgcaagaggcgtcatgctaattcaaatgatggtggaaaccctgtcgatgattttgtg
ccaaagacaaagttgcgaaaagttgaaagaaaacttgccccagctgctgagaaactgagt
gtagaggaactgatggaaacaaacacataccaaaggtttagcagatcgattgacctagta
tttgataatactgaagacttggatctcaacacagaaatggaagatgatgcggatgttcct
cctgaggctcttatacctaagtaccagcttcaagaactttgtggtgaagctgctaaactt
aaaaatctcggtgctatggaatcctttccggctgatcgacttgttcgcttgctgaacatt
ttagaaaagaacataagagatggtgttcgagtttgtccccttgctgatcctgatgaggat
gaagaggagagtaaactttggttagagttggccatggagagagtaatgcgggcagtggat
gcatcactaacatctatgtacattcttacatctcctaacatgcccaaaagaatatatttg
gaagatgttattgatcgggttgtggtgttttgcaagttccaactagttaataccatatac
ccttcctttgaccctgtgtatagggtagagaataaagccaagtcatccaaagatgatcac
cctggaagtgggcgcaaaaagaaagaaaagcaccacagttctcacgtcaaagacaaaagt
atccaaactttgtacaacaagctacatgaactagttggcttgttgagtgagttactgaat
gttcaggttctaactgacaccaccgttcttcatgcatcctctcttggtgttggacctttc
tttgttgagggggtgagcgagctccagctctcagcattacgtctcgtaacttctattttc
actaaatatgacaagcacagacgactgttactggatgatattcttgcatccattgctcgt
ctgcccagtagcaaacgcagcctcagaacataccgtttaagttcggatgagaacatccaa
atgttgacagctttagttttacaacttattcaatgtgtggttgtattaccagagacactg
caagatcaactcatggctagtgctccaaaagctaaagatggaaaagcaaaatctagtaaa
gaggaggaaaagaaaccggaaattgttagcaattgtgaccgagatgtttttattgctggt
aaatacgacactgcaatgcggactgcagcaaatttcctctctgttttcttgaacaaatgt
gggaacaagtcagaagaaattgattatcgtcccttgtttgaaaactttgttcaagacttg
cttacaactgttaacaagccagagtggcctgctgcagaacttctccttagcttactagga
actctcttggtcaccaatttcgtcaacaaaggaactgacatggctctacgtgttgcctca
ttggattacctgggtgttgtagctgctcgcttacggaaggatgcagttcagtcacaactt
aaagttgatcacatcgatcagattattagggaaattaaagcagaggagttaaaggaagaa
gacggtagtagtagtagtaaatcgtcaaaacagggtaaagggtgtgaacttgatgaagag
gaggaacggaaccagtttcttcaaagagttctccttgactaccttgctgtcaatggtcac
aatgaccaggcattaatctatgcacggcacttttaccttgctcagtggtacaaagatgcc
tcttctgatagaagaaaatctcccagcaaatcacctagcaagaaaaagaatcaaagagga
cgtaagaagcggaaagatgagtcaagtgaggaagagactgagccctcagatgatgatgat
gatgatgaagataaggatgaaggattaaatgatactgctcaaaccaattctgaaaagttc
cgtcttaccgaaattcgaaagaatttccttgttagtaagattcgtccattccaagactcc
acaaactcaggatctcgtcaacaagtcatgcaaacatatctggactacaccagtgcagag
ctcatatctagattcttggcctccaagagaccattctctcaaagctttgatatgtatctt
aaacagattcttagagttctcacagaaagttctatagctatccgaactaaggccatgaag
tgtttaacaatggttgtagaagctgatccagctgtgttgggccgggttgacatgcaattg
ggagttcgtcactcattcctggaccattctacatcagtgagagaagctgctgtggacctt
gttggaaaatttgttttaagtagaccagaactcattgacaaatactatgaaatgctctct
gcaagaattttggatactggtgttagtgtaagaaaacgagtcataaaaattctcaaggac
atttgtatagagtgtcctgacttccccaagattcctgaaatctgtgtcaagatgatccgt
agagtaaatgatgaagaaggtatcagaaaattagtcatggaagtgtttcaaaatatgtgg
ttcacaccagtccgtgaaaggccatctttagacactgtatcactcatcagaaaagttatg
aacattaccgatgttgttgctacatcccgtggcattggaatggaatggtttgagcagcta
cttgtcagtttatttagaccgagggaagacaaagaagactcaaccaaggtgcatgctgag
cccccaaaggccttattaacagcttgcaaacagatagttgattgtttgattgagaatgtg
ttacgattagaagaaagcagtaacactcaaaacaagggatcgtctcaaagactggttgca
tgtcttaccacattgaatttatttgctaagataaggcctcaactcttggtgaatcatgcc
ataactcttcaaccctatttgagccttcgctgtcagacacaaggagattatcaaatcatc
agctgtgtggctcgaacgctggaacttgtggtccccctcatggagcatccaagtgaaaca
ttcttggcacaactagaagaagattcagttaaactcatactgcaacatgaccgatcagta
gttgcttcctgcctctcttgccttggttctgttgtaaataatgttactaggaacttcaag
ctgatacgagactgctttaacaaatattacagtgttatgagagatgtcaaggaaaaagat
ttgtttttaaagcagtcagctgctagccaacaaactcgaccgtatgttagacgtgctctt
ttcactgttggattattgttgagacattttgatttcaccaataaagatgtcatcgaaggt
cttgatgaggatattaaaaatcaagtgtttgaaaccttgatatattttgtgaagttggat
gacaaggatatacaaatttatactttgcgagcaattggctcattatgcattagacattat
gattttatgcttcaatctgacttgaaagctttataccatggcctccttactggtgcagac
gctcctcttcaaatgaaagtacaggttttgaacaacattgaaatgtatttggaggaagaa
gaacagagaatgattcgtcaagatcaagagtgggccaaaatgtccaagtcagaaaatcta
aaagaaatgggtgatgtcacttctggtatggcaagtactgtcattcagttgtacctcaaa
gaaatcatggacgcattcctcaatcctgatgttagtgtaagacatgctgcactcaaggtt
atccaacttattttggctcaaggtttggtgcatcctgttcagattgttccatatcttatt
tgcatgagcactgatatggagaaagttgttagccacagtgctgacaagcaattgcaggac
atagaaaagaaatatccaggttttattcatatgaaatctcaacttggaattagattgtca
ttcaagctacactgtattcttcagcaagggccaaagggagagtatgttcctgtcagaggg
caccgccagatagagggtgaacctcttccaacagccttgaatggttttttgtattccata
cttagaagtacaaaacaacaacgtcgagctctggttctctctattctcaaacaatttgat
gagcagacaaaaactagcctttcacaaatgttgtactatgcagataatttggcttatttc
ccttatcaagtccaagatgaacctcttttcatcattcatcatgttgatatcatgatatct
gtcgcgggcaccaatttaatgcaaacattcaaagaggccttgattccactgaacaatcaa
gtgcaacggttgaatcttgaaactggacaacctgaactggtttctcttcctgaacctgat
gaagacgatgaagaggatgctgatgctttattggccaggatgcctcaggatacttctgta
ctgcaggatgtcattactgcttttcagggttgcttgctgctgttagtcctcaagcagcac
ctcaaagatctctatggctttactgatgcgaaaataactcagtactcgccatcagaagct
gctaaagtgtatgaaaaggcagtgagccggaaaagtaatgccgtgttcaatccaaaagcc
acactggcgaaactaaaagaaggcagttcacaagaaattcttgaccaggcacaacgtaaa
gcaattatcactcaatatttggatttcaaacagatgatgttgaaatttgatcctgatgat
gctgaggaagatgaagaaggcagccctggtaaatctggcactccaggtcgtgcagacaat
gcaggtggcacaccctatcaacaagaaggcattgtgcctccaatcactctgaccattaat
gcaagtcatggtgataacagccctgataaagtacgaatcaacaatgtgcagtctgcggat
ggaactcctcaaagaattcctaaattgacaattgttgcccccaaacggtcagagatcaaa
gaacgtcatcatcggaaaagtcacaaatcagataagcacaaaaagcatcgccataaaaag
aagcgcaagaagaatggtggtggaagtgatgaagacagtgatgattttagtgatcctgac
ttccttgtgtga
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