Thrips palmi (melon thrips): 117639284
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Entry
117639284 CDS
T08251
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117639284
Spliceosome [BR:
tpal03041
]
Common components
Common spliceosomal components
General mRNP proteins
117639284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
117639284
NCBI-ProteinID:
XP_034230702
UniProt:
A0A6P8YAC4
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MAEDFDVEAMLEAPYKKGEDGPITKISRENGTSESKKSKRRSRSRSRDKKEKERDRGERE
RERDKKRDRSGDRGGDRVSARGGDGGRDRGRDRDRKHRSRSRDGKHRSRSRDRKHRSGSG
SRSRERRRKRSLTPLLLPRRERGSGGGGGGGGGGGGSGKRKGLDRSPPTLLGKPDELTPE
ERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLIKCNKTRRFKGIAYVEFKDPESVT
LAMGLAGQKLLGVPIIVQPTQAEKNRAGNSMPNLQPKGTPGPMRLYVGSLHFNITEDMLR
GIFEPFGKIDNIQLIMDAETGRSKGYGFLTFHNSEDAKKALEQLNGFELAGRPMKVGNVT
ERTENAQGPSILDTDELDRTGIDLGATGRLQLMYKLAEGTGLQIPAPAAAALNLNTTTGV
PIATAQPAPPIATQCFMLANMFDPATETNPSWDTEIRDDVIDECNKHGGVLHVYVDKASP
TGNVYVKCPTIATAVAAVNSLHGRWFAGRMITAAYVPLVNYHNLFPDTITASQLLVPTRR
GV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatttcgacgtggaggctatgctggaggcgccctacaaaaaaggagaagat
gggccaattaccaagatctcaagagaaaatgggacgtcggaaagcaagaaaagcaagaga
agaagccgcagccggtcccgcgacaagaaggagaaggagcgagaccgaggagagcgagag
cgagagagagacaagaagcgggatcgtagcggggatcgtggcggggaccgtgtcagcgct
cgcggtggggacggcggccgggatcgcggcagggatcgtgatcggaagcatcgcagccgc
agccgggacggaaagcaccgcagtcgcagccgagaccgcaagcatcgcagcggcagtggc
agccgcagccgcgagcgtcgccgcaagcgctcgctgacgcccctgctgctgccccgccgg
gagaggggtagtggcggcggtggtggtggcggcggtggcggcggcggcagtggaaaaaga
aaaggtcttgacaggagtccacctacactccttggaaagccagatgagctcacgcctgaa
gagcgtgatatgcgcacagtcttttgcatgcagttatcccaaagaattagagccagagat
cttgaagagtttttctcgtctgttggaaaggtgcgagatgtgcgactcatcaaatgtaac
aaaacaagacgcttcaagggcattgcttatgtagaatttaaagatcctgaatctgtaact
ctggctatggggttggcaggtcagaaacttcttggtgtccctatcattgtccaaccaaca
caggctgaaaagaaccgtgctggaaactcaatgcccaatcttcagcctaaaggaacacct
gggcccatgagactctatgtagggtcattgcattttaacatcactgaagacatgcttagg
ggaatttttgagccatttggaaagattgacaacattcagctcatcatggatgcagaaact
ggtcgttcaaaaggatacggcttcttaactttccacaattcagaggatgccaagaaagca
ctggaacaattaaatggctttgagctagctgggcggcctatgaaggttggaaatgtcaca
gaaaggactgaaaatgctcagggcccttcaattctggatacggatgaattagatcgcact
ggtattgatctgggtgctactggtcgattacaactcatgtacaaacttgctgaaggaact
ggcctccaaattcctgctccagctgcagctgctctcaacctgaatacaacaacaggtgtc
cctattgcgacagcgcaacctgcccctcccatagccactcaatgctttatgctagcaaat
atgtttgatccagcaacggaaaccaatccaagctgggacacagaaattcgggatgatgtg
attgacgaatgcaacaagcatggaggggtcctgcatgtttatgttgacaaagcttcacca
actggcaatgtgtatgttaaatgtccgacgattgccacagctgttgctgctgtaaattcc
cttcatggaagatggtttgcaggacgaatgattactgcagcgtatgtacctttggtgaat
taccacaatctcttccccgacacaattactgcttcgcagttattagtgccgaccagaagg
ggtgtctga
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