Thrips palmi (melon thrips): 117639491
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Entry
117639491 CDS
T08251
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117639491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117639491
03012 Translation factors [BR:
tpal03012
]
117639491
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117639491
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117639491
Translation factors [BR:
tpal03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117639491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
nSTAND3
AAA_22
HA2_N
AAA_14
NPHP3_N
AAA_19
ABC_tran
NACHT
ATPase
PhoH
Sigma54_activat
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
117639491
NCBI-ProteinID:
XP_034231091
UniProt:
A0A6P8Y4Y4
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGDRFYAEDDDFFVSNRGRKGGRNSGGGGSGGSSKKFTTFRNRKQQQQKHPRNQRDLPVS
FNDNAGSSRGGGSGQGSSFPKHPPHLKGKAIGLYYASLSKKKKEAEGGKEKEKKAEKMEG
GVTINISREMEDQIRSMLEQLPRYLGNSVEDQMPGSSHAESASVTTKYNHLPDSQFKKNF
LRSLTETIDSKIERLLKTHSALERNPSKDKELKDRLLDKKENSKKYKTMYEARKKLPSFK
MQESILDLVNKNQVVVISGETGCGKTTQVAQFILDDYIMRNEGSLCRILCTQPRRISATS
VAERVASERDEQIGTVSVGYQIRLEKAVAPKQGSILYCTTGILLEWMQSDPSLADTSHII
LDEIHERDTVSDFVITLLKDILPKRPDLKVILMSATLNADHFSRYFYNCPSLNIPGFTFP
VEEFYLEDVIEMLRFQFPMSRKKWGQGENGNDFADVIGPHIRYLEKHRKYSRKTIEALRN
PESEEINYELLSRLISYICQHKPDGAILVFLPGWEQISKLNTSLTGIDHFKSSMFNIIPL
HSLMPTSVQKSVFDRPPKGVRKIILATNIAETSITIDDVVYVVDCGKIKMKNYDIKNNIQ
TLKPEWVSLANAKQRKGRAGRVKPGICYHLFSKGREMTLQDYPLPEMLRSRLDEVIIKIK
MLQLGAASPFLDKVLNPPDPLAVTHSLELLRLMNVLDSSENLTPLGYNLGKLPVDPHTGK
MLLMGALFSCVDPVCSVAASLSFKDAFMIPLGKEKEVDRIRMQLSNGSKSDLLLTGDVLM
QWEMEVKNGNGGPFCWRNFLSQNTLNMLKDLKKQFVHHLHDMKFLETSNPFADASNVNSN
NTSLVRAIICAGLYPNVAYLHKCRRIGSGRNVKKMTTPQDGRVVMHPKCVNDKETYFPSP
FFVYHLKLKSASITLHDTTMVYPLPLLFFGEKIRYYQENGKEKVAVGKHLHFRCKHSIAS
IVLELREHMNRLLEYRASHPAVIPWEDRKHPHTTLLKAIVQLITYEDAGMIQIDSSDESD
DDSDLVAMEEI
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagattctacgcagaagacgacgacttcttcgttagcaaccgcggacgcaag
ggcggtcgaaattccggtggtggcggttctggtggatcatctaaaaaatttacaacattt
cgcaacaggaagcaacaacagcagaaacatccaagaaatcagagagatctccctgtttcc
ttcaatgacaatgctggttcaagtcgtggcggtggaagtggccagggcagctcgtttcct
aaacatcctcctcacctgaaagggaaagcaattgggctttactatgccagcttaagcaaa
aagaagaaagaagctgagggagggaaagagaaagagaagaaagctgagaaaatggaaggg
ggagtaactattaacatcagtcgtgaaatggaagaccaaataagatcaatgcttgagcaa
ctccctcgttatttaggaaattctgtggaagatcagatgccaggttctagccatgcagag
agcgcatctgtgacaacaaaatataaccaccttcctgacagccagttcaaaaagaacttt
ctgcgcagtttaactgaaaccattgattccaagatagagagacttctgaagacacactcg
gcattggaaagaaacccatctaaggacaaagaactcaaagataggcttcttgataaaaag
gagaactcaaaaaaatataagactatgtatgaggcccgaaaaaagttaccctctttcaaa
atgcaggaatcaatccttgatttagtgaataagaatcaagttgtggtgataagtggtgaa
actggttgtggtaaaaccactcaagttgctcagttcattctcgatgattacatcatgcgg
aacgagggttcactatgtcgtattttatgtacacaaccccgacgtatcagtgcaacttca
gttgcagaacgggtggcaagtgaaagagatgagcagattggcactgtttctgtaggttac
caaataaggctcgagaaggctgtggcaccaaagcagggctctattttatattgcactaca
ggaattctcttggaatggatgcaatctgacccatctcttgcagatacatctcacataata
cttgatgagattcatgaacgagataccgtctcagattttgtgattacacttctcaaggat
attctacctaagcgccctgatctcaaagtgatattgatgagtgctactttaaatgccgac
cacttctcccgttacttctataactgcccttctctcaatattcctggttttactttccct
gtggaagaattttaccttgaagatgtcatagaaatgttgaggtttcaatttcctatgagt
aggaaaaagtgggggcaaggcgagaatggaaatgattttgcagatgttattgggcctcat
attagatacttggaaaagcataggaagtattcgcggaagaccatagaagccctccgaaat
ccagaatcagaagaaattaattatgagctactctcaaggcttatttcttacatatgtcaa
cacaaaccagatggagcaatccttgtatttttacctggttgggaacagatatccaagttg
aacacctcattgactggaatagatcattttaaatcttctatgttcaacataataccattg
cattctcttatgccaacttcagttcaaaagtctgtttttgaccggcccccaaaaggagtc
aggaagataattcttgccactaatattgctgaaacatccataacaatagatgatgttgtg
tatgttgtggattgtggtaaaatcaaaatgaaaaactatgatataaaaaacaacattcaa
actttgaaaccagagtgggtatctcttgccaatgctaagcaacgcaaaggtcgtgctgga
agagtgaaaccaggaatttgctatcatctcttttctaaaggacgtgagatgactcttcag
gactatcccctgcctgaaatgttgcgatctcgcttggatgaagttataattaaaatcaag
atgttgcagttaggagctgctagtcccttcttggataaggttttgaatccgccggatcct
cttgcagtcacccattccctggagttgttgagattgatgaatgttttggactcctctgaa
aacttgacacctcttggttacaatcttggaaagctgcctgtggaccctcacactggcaaa
atgcttttaatgggagctttgttcagctgtgtggatccagtgtgctctgttgctgccagt
cttagtttcaaggatgcattcatgattccacttggcaaagagaaagaggttgaccgtatc
aggatgcagctgtcaaatggcagtaaaagtgatcttttactgactggtgatgttctgatg
caatgggaaatggaagtgaaaaatgggaatggtggtcctttctgttggagaaacttcttg
tcccagaacacacttaatatgctgaaggatctgaagaaacagtttgttcatcatttacat
gacatgaaatttttggaaacaagcaatccttttgctgatgcttcaaatgtcaattcaaat
aatacaagccttgtgagagctatcatttgtgctgggctatatccaaatgtagcatattta
cacaagtgtaggaggattgggtctggaaggaatgtcaagaagatgaccactcctcaagat
ggcagagtggtcatgcacccaaaatgtgtcaatgacaaagaaacatacttccccagtccc
ttctttgtgtatcatttgaagttaaaaagtgcaagtatcacacttcatgacaccacaatg
gtttatcccttacctttacttttcttcggagaaaaaatcaggtactatcaagaaaatggt
aaagagaaagtggcagtcggtaaacatttacattttagatgtaaacactcaatcgcatct
attgtattggaattgcgtgagcacatgaatcgtttgctggaatatagagcaagtcacccc
gctgtgataccgtgggaagataggaaacacccacacactactctcctaaaggccatagtt
caattaataacatatgaagatgctggaatgatacaaatagattccagtgatgagagtgat
gatgacagtgatctcgtggcaatggaagaaatatga
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integrated database retrieval system
