Thrips palmi (melon thrips): 117639545
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Entry
117639545 CDS
T08251
Name
(RefSeq) transcription factor Sox-2
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpal03000
]
117639545
Transcription factors [BR:
tpal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117639545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117639545
NCBI-ProteinID:
XP_034231218
UniProt:
A0A6P8XW43
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MLTMESDLKGGSLHATVPPHHALHVHGHHPSSYLGHMHMSSQQPQQPQQPQQAHAVQSPP
LSPPLQHQHQHTMAQMGHQGHQHHVQPSHSPLGHHSPLGHQSPLQSPIGHHSPLHQSPLG
GHQLQQHQHGLGHPQQQQHHHQAPPQTQHHGQHPTNNNNNTSKANQNIDRVKRPMNAFMV
WSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLSETDKRPFIDEAKRLRAVHMKEHPDYKY
RPRRKTKTLLKKDKYPLGGGPLLPGGQDPGRTVPGGQQGGRDMYPSLTNGYMPNGYMMPT
DPSGYQQHYGYPRYDMSQMQHNSLNYMNGSSYGMYSSPTTVPGPAGSPYQMQQPGSQMSS
SHSPSGSSIKSEPVSPSPGPSPVVVKREYTGGPPGGPPTPGGGTPTGDLNRFISMYHLPD
PEQQRLQQMQQQYSQHAQQQEHMGLSHM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgatggagtcggacctcaagggaggcagcctgcacgccacggtgcccccgcac
cacgcgctgcacgtgcatggccaccacccgtcctcgtacctggggcacatgcacatgtcg
tcccagcagccgcagcagccgcagcagccccagcaggcccacgctgtgcagtcgccaccg
ctgtcgccgccactgcagcaccagcaccagcacaccatggcgcagatgggccaccagggc
caccagcaccacgtccagccctcgcacagcccgctgggccaccacagccccctgggccac
cagagccccctgcagagccccatcggccaccacagcccccttcaccagagccccctcggg
ggccaccagctgcagcagcaccagcacggcctggggcacccgcagcagcaacaacaccac
caccaggcgccgccgcagacccagcaccacggccagcacccgaccaacaacaacaacaac
acctccaaggcgaaccagaacatcgaccgcgtcaagcggcccatgaacgccttcatggtg
tggtcgcgcggccagcggcgcaagatggcgcaggacaaccccaagatgcacaactcggag
atctccaagcggctgggtgccgagtggaagctgctatccgagacggacaagaggcccttc
atcgacgaggccaagcggctgcgcgccgtgcacatgaaggagcaccccgactacaagtac
cggccgcggcgcaagacgaagacgctcctcaagaaggacaagtaccccctcggcggcggc
cccctgctgcccggcggccaggaccccggacggacggtgcccggcggccagcagggcggt
cgggacatgtaccccagcctgaccaacgggtacatgcccaacggctacatgatgcccacc
gaccccagcggctaccagcagcactacggctacccgcggtacgacatgagccagatgcag
cacaactccctcaactacatgaacggctcgtcgtacggcatgtactcgtcgcccaccacg
gtccccgggccggcgggctccccctaccaaatgcagcagcccggctcgcagatgtcgtcc
tcgcatagccccagcggcagcagcatcaagtctgaacccgtgtcgccgtccccggggccc
agccccgtggtcgtgaagcgcgagtacaccggcggcccgcccggaggaccccctacgccg
ggcggcggcacccccaccggcgacctcaaccggttcatctccatgtaccacctccccgac
cccgagcagcagaggctgcagcaaatgcagcagcagtacagccagcacgcgcagcagcag
gagcacatgggcttgtcgcacatgtag
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