Thrips palmi (melon thrips): 117639777
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Entry
117639777 CDS
T08251
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117639777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117639777
Spliceosome [BR:
tpal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117639777
Complex C
U5 SnRNP specific factors
117639777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
v110
Motif
Other DBs
NCBI-GeneID:
117639777
NCBI-ProteinID:
XP_034231568
UniProt:
A0A6P8ZHB6
LinkDB
All DBs
Position
Unknown
AA seq
2388 aa
AA seq
DB search
MALPPYMLGPNPWAAMMVQQQAQAQQFAQAQAHAHAQAQAQAVHAQQVAAAMQSQVVMQA
QQMPPAPAPPVQKPRDIVLTEEKLQEKAQKWQQLQSKRFSEKRKFGFVDAQKEDMPPEHI
RKIMRDHGDMSSRKYRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAI
TFVNEIPWVVEPIYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVE
PLEAIQIELDPDEDGPVAKWFYDHKPLVGTKYVNGSTYRKWNLSLPQMATLYRLANQLLT
DLVDENYFYLFDHKSFFTAKALNMAIPGGPKFEPLIKDANPADEDWNEFNDINKIIIRQP
IRTEYRIAFPYLYNNLPHYVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRHANKV
VDPLPEDDEEFELPDEVQPFLQETPLYTDNTANGISLLWAPRPFNMRSGRTRRAIDIPLV
KSWYREHCPPGQPVKVRVSYQKLLKYYVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTL
DWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLC
REILRLTKLIIDSHVQYRLNNVDAFQLSDGLQYVFAHVGQLTGMYRYKYKLMRQIRMCKD
LKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKG
VAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWK
VPGLPTPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAE
QERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLK
EAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRSFKEVGIEFMDLYSHLVP
VYDVEPLEKITDAYLDQYLWYEADKRRLFPPWVKPSDTEPPPLLVYKWCQGINNLQDVWD
CSEGECNVLLESKFEKIYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNS
YGIIRGLQFASFIVQYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVSTESSHPIRL
YCRYIDRAHIFLRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDV
NLGRAVFWDIKNRLPRSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEF
THRDGVWNLQNEITKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTAL
IGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGM
LSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWA
EYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQV
LKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKAS
GFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIP
TLKISLIQIFRAHLWQKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCA
DVLLFAAYKWNVSRPSLLADSKDTMDNTTTQKYWIDVQLRWGDYDSHDIERYSRAKFLDY
TTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERI
RKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAI
FIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG
MLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTI
SSYTAFSRLILILRALHVNTERTKVVLKPDKTTITEPHHIWPTLTDDEWIKVEVQLKDLI
LADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTV
NKHGDEIITSTTSNYETHTFSSKTEWRVRAISATNLHLRTNHIYVQSDDIKETGYTYILP
KNVLKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMAPQWGTHQTVHLPGQLPQHS
FLKEMEPLGWIHTQPNELPQLSPQDITTHAKVMADNASWDGEKTIIITCSFTPGSCSLTA
YKLTPSGFEWGRQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPAQGSWNYNFMGVR
HDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLEDGDGVGADREDLYT
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcccgccatacatgttggggcccaacccctgggccgcaatgatggtccaacag
caagctcaagcacagcagtttgcccaggctcaagcgcatgctcatgctcaagcccaggct
caagctgtacatgctcagcaagttgcggcagccatgcagtctcaagtcgtgatgcaggca
cagcaaatgccacctgcgcctgccccgcctgttcaaaagcctagggacattgtcctcaca
gaggagaaactccaagaaaaggcacaaaaatggcagcaacttcagtccaaaagattttca
gagaagaggaaatttggctttgtggatgctcaaaaagaggatatgccacctgaacacatc
cgtaaaatcatgcgagatcatggtgacatgagtagtcgcaaatatcgtcatgacaagaga
gtgtatctgggtgccctgaaatacatgcctcacgcagtgatgaaattattagaaaatatg
cccatgccttgggaacagatcagggatgtgaaggttctttatcacatcactggtgctatc
acatttgtcaatgaaatcccttgggttgtggaacccatctatattgctcagtggggaaca
atgtggattatgatgcgccgagagaagcgtgaccgtcgccacttcaagcgtatgcgattc
cctccatttgacgatgaagaacctccacttgattatgctgataacgtgttagatgtggaa
ccacttgaggcaatccagattgaattggatcctgatgaagatggaccagttgccaaatgg
ttttatgaccacaaacctttagttggcactaagtatgtaaatggatctacatacagaaaa
tggaatctctccttacctcaaatggccacattgtatcgcctagctaatcagcttttgaca
gatttagtggatgaaaactatttctatctctttgatcataagtccttcttcactgcaaag
gctctgaacatggctatcccaggaggccccaaatttgagccactcatcaaagatgcaaat
ccagctgatgaagactggaatgaattcaatgacattaacaagattataatcagacagcct
atccgaacagagtacaggattgctttcccttatttgtataacaacttgccacactatgta
cacctttcatggtaccatgcacctaatgtagtttacatcaagacagaggatcctgatctt
cctgcattttactttgatcccctgatcaaccctatttcccataggcatgccaataaggtt
gtggatcccctaccagaggatgatgaagaatttgagctccctgatgaagtccaacctttc
ctacaggagactcctctgtacactgataacacagctaatggcatttctcttttgtgggcg
ccgagaccatttaacatgcgatcaggacgaacaagacgagccattgatattccacttgtg
aagagttggtacagggaacactgccctcctgggcaacctgtgaaagtgagagtcagttac
caaaagttgttgaagtactatgtgctaaatgccctgaagcatagacctcccaagcctcag
aagaagaggtatctgttcagatcatttaaatcaaccaagttcttccaaactacaactttg
gattgggtagaggctggcctgcaggtgtgcaggcagggctacaacatgttgaacctgctt
attcatcgtaaaaacttgaactacctccacttggattacaacttcaacttgaaaccagtc
aagactttaaccaccaaggaaagaaaaaaatctcggtttggtaatgcattccatctttgc
cgagaaattctacgtctcacaaaactaattattgattctcatgttcaataccgcttgaac
aatgttgatgctttccaactgtctgatggtcttcagtatgtctttgcccatgttggtcag
ctcactggaatgtacaggtacaagtacaagttgatgagacagatccgaatgtgcaaagat
ttgaagcatctcatctactaccgattcaacactggacctgttggtaaaggacccggctgt
gggttctgggctcctggttggagagtttggctgttctttatgagaggaatcaccccacta
ctggaaagatggcttggtaacttgctgtcccgacagtttgaaggtcgtcattctaagggc
gttgctaagactgtcactaagcagagagtggagtcgcacttcgacttggaactgcgagca
tctgtaatgcatgacattgtggacatgatgccagaaggaattaaacagaacaaagctcgt
accattctgcaacatctctctgaagcatggcgctgttggaaagcaaacatcccatggaaa
gttcctggactgccaactcccattgaaaacatgattctgcggtacgtgaagatgaaggct
gattggtggactaacactgctcactacaatcgtgagcgtattcgcagaggggcaactgtg
gacaagactgtgtgcaagaagaatttgggccgcttgacccgtctgtacctaaaggctgag
caagaacgtcagcacaactatttgaaggatggtccttacatttctcctgaagaggctgtt
gctatctacacaaccactgtgcattggctggagtcacggcgctttgctccgattcctttc
ccccctttgtcatacaaacatgacaccaagctgctcattctggctttggaaagactgaag
gaagcttacagtgtgaagtctcgtctcaatcagagtcaaagagaagaattgggtcttata
gaacaggcctacgataaccctcatgaggctttgtctcgtatcaagcgtcatcttcttaca
cagcgttctttcaaagaagttggaattgagttcatggatttatacagtcacttggttcct
gtatatgatgttgaacctttggagaagattactgatgcttaccttgatcagtatctttgg
tatgaagctgacaaaagaaggttgttccctccatgggttaaaccgtcagacacagaacca
ccaccattgcttgtctacaagtggtgtcaaggaatcaacaacttgcaggatgtatgggat
tgttctgaaggagagtgcaacgtactgttggagagcaagtttgagaaaatctatgagaag
atagatttgactcttctgaacaggttgttgcgtcttattgtggatcacaacattgctgat
tacatgacagccaagaataacgttgtcatcaattataaggacatgaaccataccaattcg
tatggtattatccgtggtctccagtttgcatctttcattgttcagtactatggcttggtg
ctggacttgctagtgctagggttgcagcgagccagtgaaatggctggtccacctcaaatg
ccaaatgactttttgactttccaagatgtcagcacagaatcttctcaccccatccggctt
tactgcagatacattgaccgagctcatattttcttgagattctctgccgaggaagcccgt
gacctgattcagagatatcttactgaacaccctgatcctaacaatgaaaatattgttggg
tacaataacaagaagtgttggcctcgagatgctcgaatgcgtctgatgaagcacgatgtt
aatttgggtagagctgttttctgggatataaagaatagattacctagatctacaactacc
attcagtgggaaaacagttttgtcagtgtgtactctaaagacaaccccaacttacttttc
aacatgagtgggtttgaatgtcgcatcttaccaaagtgccgcacaacacatgaagaattc
actcaccgtgatggtgtttggaatcttcagaatgaaataacgaaggaaagaactgcacag
tgcttcttgagggtggatgatgaatcaatgcaaaggttccacaacagagtcaggcaaatt
cttatggcctctggctcaactactttcactaagattgtaaataagtggaatactgctctg
attggtctcatgacttatttccgtgaagcagttgtcaacacccaggaactccttgacctt
cttgtgaagtgtgaaaacaaaatccagacccgtatcaagattggtctgaactctaaaatg
ccttctcgtttccctcccgtggtgttctacactccgaaggagttgggtggtctgggcatg
ctgtctatgggacatgtattaatccctcagtcagacttgcggtggtcaaagcaaactgat
gtgggcatcactcatttccggtctggtatgagccacgatgaagatcaacttattcccaat
ctgtacagatacattcaaccttgggaaagtgagttcattgattcccagcgtgtgtgggct
gaatatgccctcaaaagacaagaagccaatgcccaaaatcggcgtctcactttggaagac
ttggaagactcctgggatcgtggtattcctcgaatcaacaccttgttccagaaagacagg
cacaccttggcttatgacaaaggctggcgtattcggacagaattcaaacaatatcaggtg
ttgaagcaaaatcctttctggtggacgcatcagcgacacgacggaaagctctggaacctg
aataactaccgtactgacatgattcaagcactgggcggtgtggagggtatcctggaacac
actctgttcaagggaacttacttccctacatgggaaggtctgttctgggagaaagcatct
ggatttgaagagtctatgaagtacaagaagctgaccaatgcccagcggtctggtttgaac
cagattcccaatcgtcgtttcactctctggtggtctcccactatcaaccgagctaatgtg
tatgttggtttccaagtacagctggatctgactggtattttcatgcacggcaagattccc
acactcaagatttctctgattcaaatcttcagagctcacttgtggcagaaggtgcatgag
tctattgtcatggatctgtgtcaagtatttgatcaggaattagatgctctggaaattgag
actgttcagaaagaaactattcacccccgaaagtcatacaagatgaattcatcttgtgct
gatgtcttgctctttgctgcttacaaatggaatgtttcaaggccatccctactggcagat
tctaaagacaccatggacaacacaactactcagaagtactggattgatgtgcaattgagg
tggggtgattatgattctcatgacattgagagatattccagagccaagttcttggattat
accactgacaatatgtccatctatccttcacccactggagtcttgattgcaattgattta
gcctacaacttgcacagtgcctatggcaactggttccctggatccaagcctctcattcag
caagcaatggctaaaattatgaaggccaaccctgccttgtatgtcttgagagaacgtatt
cgcaaggctctgcaactttactcttcagagcccacagaaccttacctgtcatctcaaaat
tatggagagctcttctcaaaccaaattatttggtttgttgatgacaccaatgtgtaccgt
gtcacaattcacaaaacatttgaaggtaacttgaccacgaagcctatcaacggagccatc
tttatcttcaacccacgaactggacagctcttcttgaagattattcacacgtctgtgtgg
gctggccagaaacgtcttgggcagctcgccaagtggaaaactgctgaagaagtggcagct
ttgatccgttctttgccagttgaagaacagcctaagcagatcattgtaacaagaaagggt
atgttggatcctctagaagtccacttgctggatttccctaacattgtgatcaaggggtcc
gagcttcagcttccattccaagcttgcctgaaggttgagaagtttggtgatttgattttg
aaagctacggaacctcagatggttctgttcaacctgtacgatgactggttgaagacaatt
tcatcctacactgctttctcaaggctgatccttattctgcgagctctccatgtcaacact
gagagaacgaaggttgttctgaaacctgacaaaacaacaatcactgagcctcaccacatt
tggccgactctcactgatgacgaatggatcaaggtggaagttcagcttaaggatcttatt
ttggcagactatggcaagaagaacaacgtcaatgttgcctctttaacacaatctgaaatt
cgtgatatcatccttggtatggagatcagtgctccctctgctcaacgtcaacaaattgct
gaaattgaaaagcaaactaaagaacagagtcagttgactgccactacaactagaactgtt
aacaagcatggtgatgaaattattacatcaaccacatccaattatgaaactcacactttc
agctccaagactgaatggagagtgagggccatctcagccaccaaccttcatcttcgtact
aaccacatttatgtgcaatctgatgacatcaaggaaaccggatacacctacattctccct
aagaatgttttgaagaagtttgttactatctctgacttgcgcgctcagattgctgggtat
ttatatggtgtcagtccacctgataacccacaagtgaaggaaatcaggtgtattgtgatg
gcacctcaatggggaacacatcaaactgtgcacctccctgggcagttgcctcagcactct
ttcctgaaagagatggagccccttggttggattcatactcaacccaatgaactgcctcag
ctttcccctcaggacatcactacccatgctaaggtcatggctgacaatgcctcttgggat
ggcgagaagactataattatcacttgcagcttcacccctggctcctgctcactaacagcc
tacaaacttacacccagtggttttgagtggggccgtcaaaacacagacaagggaaataac
cccaaaggttacttaccttctcattatgaaaaagtacagatgctgctgtcagatcgcttc
cttggattcttcatggtgccagcgcaaggttcttggaattacaacttcatgggtgttcga
catgatcccaacatgaagtacgaactgcaattagccaatcccaaggaattctaccatgaa
gtccaccggccagcgcacttccttaacttctcatcactagaagacggtgatggtgttggt
gctgacagagaagatctctacacatag
DBGET
integrated database retrieval system
