Thrips palmi (melon thrips): 117639943
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Entry
117639943 CDS
T08251
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117639943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117639943
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
117639943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
117639943
NCBI-ProteinID:
XP_034231930
UniProt:
A0A6P8Y5Y4
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MASTQIKGSGWPRRASQTSPFDQKFAANSTNTAINRPINLYPLTNYTFGTKEPLFEKDPS
VPARFQRMREEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVE
GLKRLLTETLGRQDGVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLFLVQL
AEKALFAVPKNYKLVAAPLFELYDNAQGYGPIISSLPQALCRFNFVYL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggctagcacccaaattaaaggtagtggctggccgcgaagggcaagtcaaacatctcca
tttgatcaaaagtttgcggccaactcaacaaacacggcgataaacagaccaatcaacttg
tatcctcttactaactacacttttggcaccaaggaaccattatttgaaaaagatccgtct
gtccctgcgagatttcagagaatgagagaggaattcgacaaaattggtatgagacgcagt
gttgagggagtattgcttgttcatgaacatggccttccgcatgtccttcttctacaactc
ggcaccacattttttaagcttcctggtggtgaattgaatgctggtgaagatgaggttgaa
ggtttaaagcgccttttaacagagacactcggtcgtcaggatggtgttaagcaagaatgg
gtgatcgaggacacaataggcaactggtggcgacccaactttgagcctccacagtaccca
tacgtgcctccacacatcaccaagccgaaagagcacaagcgacttttccttgtccagttg
gccgaaaaggctctttttgcagttcctaagaactacaagctagttgctgctcccttgttc
gaactgtacgataacgctcagggatacggccccatcatttcatcccttcctcaagccctc
tgcaggttcaattttgtttacttgtga
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integrated database retrieval system
