Thrips palmi (melon thrips): 117640071
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Entry
117640071 CDS
T08251
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03013
Nucleocytoplasmic transport
tpal03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117640071
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117640071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117640071
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117640071
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
DUF7129
Motif
Other DBs
NCBI-GeneID:
117640071
NCBI-ProteinID:
XP_034232189
UniProt:
A0A6P8ZHP0
LinkDB
All DBs
Position
Unknown
AA seq
1512 aa
AA seq
DB search
MSNNKPRSSKPYDPNNSFVKKVASRVSGLIPKSTSWLSGWFSPNAAAEPGTSDRVEQTNN
EEEHFEDALEKPPPAKRFKVTANQQYVETYNRCQTIEPGEGSSRLVPNNFIDTSAIPGPS
GLGNRAGFVASTPATTSVEHLEPKANGDDCSESGESTSGCSSLEPQINRGIPCAQNQSRQ
NDSISPRKQHLIDEKLNYSYLQNSRSLFLDRTSNSRSNQTVGRRNNPSFCVSTFGTPLFG
ERGNVNDLILNSPFYSGRTTYGGASSASYRRSLGSASLSSSPANSEKLARHTIKVKPGNS
QSTADTSMSQTAKRILATLEQFSTPILDAKRIPVSQEPVLASLGSRKRTRADDLANPQLV
LEQPRVPKRTSNKPVHWAKGAPSTSQLTIPTVPDTLIHRRQKVFQEPFSTATQPSSTKAD
SYELRSEIDDNSATRNLLKMKQKPRLTEKVIKEPEMAPEVNLPQVPLQISTLPTFDISVP
APKPDVPKTSSPSVSSFGSSSLSKPQPASRPSATAASSPVLAFKLSTDSNPGFKLSADAA
AAFKLSTDAVLSDASFSFSSPIRVSTASKEQTTLTPVNNFTFSNPLPASAKFMESSNTSV
KPRPRTTEASPRQSDSFPGGLKPASQLKAGSVMDILGKSKSDATPSANGSLSLMDKFKPA
AGTWECEKCLIRNKSDVTKCAACENPREAKTPNVSESTETKATQVIAPLKPASDFGAQFK
MAGGMWECSACMVRNKDSEVKCVACTTAKPGAAPPPKPAAATTSFSGWGDKFKPPSNTWE
CSVCMVRNGSELSACQSCSTKKPGSIETTSPPVKSSWGDQFKKPEGSWSCGDCMVTNKST
DLNCVACSAKKPGSDASASPAKPSSQFSFGITPSNNSGSAAPAFSFGIPKDNNEGSEGEK
SGVSSSTGFKLGDSKPAASATFSFGVPPPSTSASASPASSGASSGVSMFGSVPSAASTTN
PAPVEKKPAESAAPEAAKPTFSFGVPAASAAKPTTSMFSFSPASTAPAETTKPTSSTGSP
LGGKRKLGDDAPSSSAPFKFGSGGSPAPQSQAKPVVTSTSSVSSTSGPVFSFSSGSNASA
LLTAAVTSTANGQNAVEAKSGTTNSLFAVAAPASSSPKPAISFGASANATKDESVSSTWK
PPSPRNATNVDGPKPAADTNGAPAAVKTFSFGSNVSSSSMAFGANASSAAPAFSFGPGAS
DKTAATSKAAISFGSTSSSATSLFSAPASTAPLFGSGSSTSASATPAFGSANHVGFGSLT
SPANPAPAFQATNSSAPSFSAPVASAFSSSFSGASEEKKEAFSFSAPPAKKSAGFAFSAP
EDTKKVFSFGQTASDDSKKSAASFSFTAAAPSAAPNSFPAAPSSVFTFGAAAPAPASNGP
AKPDFAFGGNQQPSFPSFNSQPASSTAGFSFGGATPSFGSVDGNAAPAPTPFGGAGSFNS
PSFGTASPQPSGFNFSAGNLSGFGTQAQPASGAFNFSADPKPSFFSATPSQDPSAAPGPR
RIKRATRRVPPK
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaacaagccgcgttcaagcaaaccgtatgatccgaacaatagctttgttaag
aaagttgcgtcccgagtttcgggacttattcccaaatcaacatcatggttgtcggggtgg
ttctcacccaacgctgctgctgagccgggaacaagtgacagagtcgagcagacaaacaat
gaggaagagcactttgaagatgctcttgaaaaaccacctcctgccaagaggtttaaggtg
acagcaaaccagcagtatgttgagacctacaacagatgtcaaacaatagagcccggtgaa
ggtagcagtagacttgttccaaacaattttattgacacctctgccattccgggtcccagt
ggcctaggaaatcgcgctggttttgtggcttcaactccagctaccacctctgttgagcac
cttgaacctaaagccaatggagatgattgctcggagagtggtgaatcaaccagtggttgc
tcctctctggaaccacaaatcaatagaggaataccttgtgcccagaatcaatcaaggcaa
aatgactcaatttccccaaggaaacaacatcttattgatgagaaactcaattacagctat
ttgcaaaattcgaggtctttatttcttgaccgcacttccaacagtcggagtaatcagact
gttgggcgacgcaacaacccatccttttgtgtcagtacttttgggactcccctgtttgga
gaaaggggtaatgtgaatgaccttatccttaactcccctttttattctggacgaactacc
tatggaggtgcttcctcagcttcttaccgccggtcacttggatcagcatccctctcatct
tcccccgccaacagcgagaagttggctagacacaccatcaaggtgaaaccaggcaattct
caatccactgccgataccagcatgagccaaactgccaagagaattttagctactctagag
caattttcaacccctattttggatgctaagcgtatccctgtctctcaagagccagttttg
gcaagtttggggagtaggaaacgcactcgtgccgatgatttagcaaatccacagcttgtt
ctagagcagccacgagtacctaaacgcacttcaaacaagcctgttcactgggccaaaggc
gcccctagtacatctcaattgacaattcccacagttcctgacacattgatccatagaaga
caaaaagtttttcaagaaccattctcaactgctacgcagccatccagtacaaaagctgac
tcttatgaacttaggtctgaaattgatgacaacagcgccactagaaacttgttaaaaatg
aaacagaaaccacgccttactgaaaaagtaatcaaggagcctgaaatggccccggaagtc
aatctccctcaagttcctctacaaatatctactcttcctacttttgacatcagtgtacct
gctcctaaacctgatgtaccgaagacttcttcaccatctgtgtcatcatttggatctagt
agcttaagcaagccacagcctgcatcccgtccgtcagcgacagcagccagttctcctgta
cttgcattcaagctcagtacagattctaatccaggattcaaactcagcgctgatgcggca
gctgcattcaaactcagcactgatgctgtactctcggatgcatctttctccttctcttct
cctataagagtatcaacagcaagtaaggaacagacaaccctcacacctgtcaacaatttc
acctttagcaaccccttaccagcatctgccaagtttatggagtcttctaatactagtgtc
aaacctcgtccgagaacaactgaagcatcaccgaggcagagtgatagtttccctggcggt
ttgaagccagcatctcaactgaaggctggtagtgttatggatatcttggggaagagcaag
agtgatgccacaccaagtgccaatggaagtctttcactcatggacaaattcaaacctgcg
gctggaacgtgggaatgtgaaaaatgtttgattagaaataagagtgatgtgacaaagtgt
gctgcttgtgagaacccaagagaggctaagactccaaatgtgagtgaatctaccgaaacc
aaggcgactcaagttattgctcctctgaaacccgcatctgactttggagcccaattcaag
atggcaggaggtatgtgggaatgttcagcctgtatggtcaggaacaaggattctgaagtc
aagtgtgtggcttgcacaactgccaagccaggtgctgcaccaccacccaagccggccgct
gcaactacgagcttctcaggatggggagacaaatttaaacctcccagtaatacttgggag
tgcagtgtgtgcatggtgcggaatggttcagagctttctgcttgccagtcatgtagtaca
aagaagcctggctccattgaaacgacaagtcctccagtaaagagcagctggggtgatcag
ttcaaaaagccagaaggctcttggtcgtgtggtgactgtatggtaacaaacaagtctacg
gatttaaattgtgttgcttgttcagccaagaagccaggctcagatgcctcagcttcacct
gccaaaccaagctctcagtttagttttggcatcacaccttcaaataatagtggatctgct
gctccagccttttcctttggaatccctaaagacaacaacgaaggaagtgagggggagaag
tcaggtgtcagcagttccacaggtttcaaattaggagacagcaaaccagctgcgtctgct
acattttcgtttggagttcctcctccatctacctctgcaagtgcaagtccagcatcctca
ggtgcttccagtggcgtctccatgttcggcagtgtgcctagtgcagcatcgaccactaac
cctgcaccagtggagaagaaaccagcagagtcggcagcacctgaggcagctaaaccaacc
ttttcattcggtgttcctgctgcttctgctgcaaagccaaccacatcaatgttctctttc
tctccggcttcaactgctcctgccgaaacgacaaaacccaccagcagcactggaagtccc
cttgggggaaagcgaaaattgggtgatgatgcaccaagcagttcagccccattcaaattc
ggttctggtggcagtccagctccgcagtcgcaggccaagcctgttgttacaagtacttcc
tcagtgtcctccacatccggtccagttttttcgttttcatcgggttcaaatgccagtgcc
ttgttgacagccgccgttaccagcacagcaaacggtcagaatgctgtggaagccaagagt
ggcaccaccaacagcctcttcgccgtggccgcccccgcgtcatcgtctcccaaaccggcc
atatcgtttggtgcaagtgcaaatgcaaccaaggacgagtcggtatcaagtacatggaaa
ccaccctcgccaagaaatgccaccaatgttgatggacccaagccagccgctgacaccaac
ggggctcccgccgcagtcaagacattctccttcggaagcaacgtttcttcaagtagtatg
gcctttggtgcaaatgcaagctccgccgctcctgccttttcgtttggccctggtgcttct
gataagactgccgctacgagcaaagcagctatctctttcggttcaacatcatcatcagcc
acatccctcttcagtgcaccagcatctactgcacctttgtttggttccgggtccagcact
tcggcaagtgccacacctgcgtttggatcagcgaaccacgttgggtttggatctctgacc
tctccagcaaaccccgcccctgccttccaagcaaccaactcttcagcacctagctttagt
gctcctgtagcttctgcgtttagctcttcttttagtggagcctcagaagaaaagaaagaa
gcattttcattcagtgctcccccagccaagaagtctgctgggtttgctttcagtgcacct
gaagacaccaagaaagtcttctcctttggccaaactgcctctgatgattcaaagaagagt
gctgctagtttttcgttcacggcagcagctccaagtgctgctccaaattcattccctgct
gcgccctcttcggtgttcacatttggtgcagctgcacctgctcctgcctccaatggtcct
gcaaagccggacttcgcctttggtggaaaccagcaaccttctttccctagtttcaactct
cagccagcatcttcaactgctggcttcagtttcggaggtgcaaccccatcttttggaagt
gtggatggcaatgctgctccagcccctaccccatttggaggtgctggttccttcaatagc
ccatcatttggcacagccagccctcagccaagtgggtttaacttttctgcgggaaactta
tcaggtttcggcacacaggcccaacctgcgtctggtgcatttaattttagtgcggatcca
aaaccatcatttttctcagcaactccctcacaagatccatctgcggcgcctggacctcgg
cgtatcaaacgggcaactcgaagagtacctcctaaataa
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integrated database retrieval system
