Thrips palmi (melon thrips): 117640110
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Entry
117640110 CDS
T08251
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117640110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117640110
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117640110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WDR55
Utp13
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR41
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_like
VPS8_N
Nbas_N
UTP15_C
Crass_capsid
P16-Arc
Motif
Other DBs
NCBI-GeneID:
117640110
NCBI-ProteinID:
XP_034232258
UniProt:
A0A6P8XYT7
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MSSKLKLKEVFEVESKLGAIFTGGTVEWTSDGKLFLCQCGPAINLLDVESGKLIGRLGHT
EDSDDSALDDIVVSFALSADDQHVVSCHKSGLFHLWNVPTQKSMKSWKSIHKGPVARIAL
TTNGTVMASGGSDSSVRLWDLVHQSCTHNLIGVQGVVSVLTFHPDKARKLLLGAADNAVI
VGWDVETGKPALTLEGHFSRVSSISIHSDGKHIVSCGRDKVVILWDLDKQCAINTIPLYE
GLEGLVILPPEVSLPVQAKKGGIWVAVAGERGVVRVWDVFAAKEIFVQSNSLISKAKEEG
SLAITRLLWNSDVGALGVVSSEHNIILHKVDTFQCVKQFVGFSDEILDIAYVGKDDSHLA
VATNSTNVALYRVSDMSCTLLRGHTDLVLSLSTSRSNPKLFVSCAKDYCVRVWQLTEDGS
TAVCVGLGQRHTAAVGSVHFGQLSCNILASAGQDSCIKIWSLPSKWDSESAPVTINAKIT
QIAHPKDINSICFSPNDKLLATGSQDKTAKLWSVEDLSLVGVLRGHRRGVWCVRFSPVDQ
MVLTTSADCTMRLWSLQDLSCIKTFEGHDSSVVRGEFLSQGNQLVTGGADGLLKLWLIKS
GECVSTFDEHSGRIWALTVSTTESAIVTGGADSTLVTWKDVTEEKKQAAIEEKEKLTLQE
QQLSNLIHNNELLKALKLALRLQRPHQCLTIVQNILKKGDTRGLSETLSQLGTSQQEDLL
KYAVLWNSNGKHCYTAQAVLSVLLDHISSGKLRLEGLRATLEGLLPYTDRHMRRLSELQQ
DLHLLAFTANCMQPHAS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaaattaaaattaaaagaggtgttcgaagttgaatcgaagctcggagctatc
tttacaggtggcacagtcgagtggacatcagatggaaagctattcctgtgccaatgtggt
cctgcaatcaacttgttagatgtagaatctggcaaattgattgggagactgggtcatact
gaggactctgacgattctgcgctggatgacattgtcgtttcatttgccctatctgctgat
gatcagcatgttgtatcatgtcacaaaagtggtcttttccacttgtggaatgttccaacc
caaaaatctatgaaatcatggaaaagcatacacaaaggtcctgtagccagaattgctctt
acaaccaatggaactgttatggccagtggaggctctgattcaagtgtacgactctgggat
cttgtccaccaatcatgtactcacaacttgattggtgttcagggtgttgtaagtgtattg
accttccatcccgacaaagcacggaagcttcttttaggggctgcagataatgctgtaatc
gttggatgggacgtggaaacaggaaaacctgccctcacattggagggacacttcagccga
gtgtcttccatatccattcatagtgatggaaaacacattgtcagttgtggacgagacaaa
gtagtaatattgtgggatcttgataagcagtgtgctataaatacaataccactctatgaa
ggtttggaaggacttgttatacttccccctgaagtatcattgccagttcaagccaaaaaa
gggggcatttgggtggccgtggcaggagagagaggagtggttcgagtgtgggatgtgttt
gctgctaaagaaatctttgtgcaatcaaactctttgatatctaaagccaaggaggaagga
agtctggccatcacccggcttttgtggaattctgatgttggtgccttgggagtggtttct
tctgaacacaatattatacttcataaagtggacacattccaatgtgtgaaacagtttgtt
ggctttagtgatgagattcttgacattgcttacgttggtaaagatgattcccatctggct
gtagctacaaacagcacaaatgtggctctttaccgtgtttctgacatgagttgcaccctt
ttacgtggacatactgacctcgtcttgagtctttcaacatctcggtcaaatcccaaactt
tttgtttcatgtgctaaagattattgtgtgagagtttggcaattgacagaagatggtagc
acagccgtatgcgtggggcttggacagcgtcacacagctgctgttggttctgttcacttt
ggccaattgtcatgcaatattcttgcttctgctggacaggacagttgcattaaaatttgg
agccttccttccaagtgggatagtgaatctgcacctgttacaatcaatgcaaaaattact
caaattgctcatccaaaagatatcaatagtatttgcttctctcccaatgataaactttta
gcaacgggctcacaggacaagacagccaagctttggagtgtagaagacctttctttagtt
ggagttttacgtgggcaccgcagaggtgtttggtgtgtgcgattttctcctgtagatcag
atggtcctaaccacatcagcagattgtactatgcgtttgtggtctttgcaagatttgtcg
tgtattaagaccttcgaaggccatgattcatctgtggtccggggggaatttttatctcaa
ggaaatcaattagttacgggaggagctgatgggcttcttaaattatggcttataaagtca
ggtgaatgtgtctccacctttgatgagcatagtggtcgaatttgggctttgacagtgtca
accactgaaagcgcaattgtgactggaggggctgattccacattagtgacatggaaagat
gtaactgaagaaaagaaacaagctgctattgaagagaaggaaaagttgactcttcaagaa
caacagttgtccaatttaattcacaacaatgagcttctcaaggcccttaaattagctcta
agactgcagagaccacatcaatgtttgacaatagtccaaaatattcttaaaaaaggagac
acaagaggactcagtgaaactttgtcacaacttggaacaagtcagcaggaagatcttttg
aagtatgcagttttgtggaattcaaatggaaagcattgctatacagctcaggctgtttta
tcggttttactagatcacatttcttctggaaaactgagattagaaggattaagagctacc
ctagagggtcttttgccttacactgacagacacatgcggcgactatctgagttacaacaa
gatcttcatctcctagcctttactgccaattgcatgcagcctcatgcttcatga
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integrated database retrieval system