KEGG   Thrips palmi (melon thrips): 117640110
Entry
117640110         CDS       T08251                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117640110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpal03009]
    117640110
Ribosome biogenesis [BR:tpal03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    117640110
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WDR55 Utp13 WD40_Gbeta EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_like VPS8_N Nbas_N UTP15_C Crass_capsid P16-Arc
Other DBs
NCBI-GeneID: 117640110
NCBI-ProteinID: XP_034232258
UniProt: A0A6P8XYT7
LinkDB
Position
Unknown
AA seq 797 aa
MSSKLKLKEVFEVESKLGAIFTGGTVEWTSDGKLFLCQCGPAINLLDVESGKLIGRLGHT
EDSDDSALDDIVVSFALSADDQHVVSCHKSGLFHLWNVPTQKSMKSWKSIHKGPVARIAL
TTNGTVMASGGSDSSVRLWDLVHQSCTHNLIGVQGVVSVLTFHPDKARKLLLGAADNAVI
VGWDVETGKPALTLEGHFSRVSSISIHSDGKHIVSCGRDKVVILWDLDKQCAINTIPLYE
GLEGLVILPPEVSLPVQAKKGGIWVAVAGERGVVRVWDVFAAKEIFVQSNSLISKAKEEG
SLAITRLLWNSDVGALGVVSSEHNIILHKVDTFQCVKQFVGFSDEILDIAYVGKDDSHLA
VATNSTNVALYRVSDMSCTLLRGHTDLVLSLSTSRSNPKLFVSCAKDYCVRVWQLTEDGS
TAVCVGLGQRHTAAVGSVHFGQLSCNILASAGQDSCIKIWSLPSKWDSESAPVTINAKIT
QIAHPKDINSICFSPNDKLLATGSQDKTAKLWSVEDLSLVGVLRGHRRGVWCVRFSPVDQ
MVLTTSADCTMRLWSLQDLSCIKTFEGHDSSVVRGEFLSQGNQLVTGGADGLLKLWLIKS
GECVSTFDEHSGRIWALTVSTTESAIVTGGADSTLVTWKDVTEEKKQAAIEEKEKLTLQE
QQLSNLIHNNELLKALKLALRLQRPHQCLTIVQNILKKGDTRGLSETLSQLGTSQQEDLL
KYAVLWNSNGKHCYTAQAVLSVLLDHISSGKLRLEGLRATLEGLLPYTDRHMRRLSELQQ
DLHLLAFTANCMQPHAS
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgtcatccaaattaaaattaaaagaggtgttcgaagttgaatcgaagctcggagctatc
tttacaggtggcacagtcgagtggacatcagatggaaagctattcctgtgccaatgtggt
cctgcaatcaacttgttagatgtagaatctggcaaattgattgggagactgggtcatact
gaggactctgacgattctgcgctggatgacattgtcgtttcatttgccctatctgctgat
gatcagcatgttgtatcatgtcacaaaagtggtcttttccacttgtggaatgttccaacc
caaaaatctatgaaatcatggaaaagcatacacaaaggtcctgtagccagaattgctctt
acaaccaatggaactgttatggccagtggaggctctgattcaagtgtacgactctgggat
cttgtccaccaatcatgtactcacaacttgattggtgttcagggtgttgtaagtgtattg
accttccatcccgacaaagcacggaagcttcttttaggggctgcagataatgctgtaatc
gttggatgggacgtggaaacaggaaaacctgccctcacattggagggacacttcagccga
gtgtcttccatatccattcatagtgatggaaaacacattgtcagttgtggacgagacaaa
gtagtaatattgtgggatcttgataagcagtgtgctataaatacaataccactctatgaa
ggtttggaaggacttgttatacttccccctgaagtatcattgccagttcaagccaaaaaa
gggggcatttgggtggccgtggcaggagagagaggagtggttcgagtgtgggatgtgttt
gctgctaaagaaatctttgtgcaatcaaactctttgatatctaaagccaaggaggaagga
agtctggccatcacccggcttttgtggaattctgatgttggtgccttgggagtggtttct
tctgaacacaatattatacttcataaagtggacacattccaatgtgtgaaacagtttgtt
ggctttagtgatgagattcttgacattgcttacgttggtaaagatgattcccatctggct
gtagctacaaacagcacaaatgtggctctttaccgtgtttctgacatgagttgcaccctt
ttacgtggacatactgacctcgtcttgagtctttcaacatctcggtcaaatcccaaactt
tttgtttcatgtgctaaagattattgtgtgagagtttggcaattgacagaagatggtagc
acagccgtatgcgtggggcttggacagcgtcacacagctgctgttggttctgttcacttt
ggccaattgtcatgcaatattcttgcttctgctggacaggacagttgcattaaaatttgg
agccttccttccaagtgggatagtgaatctgcacctgttacaatcaatgcaaaaattact
caaattgctcatccaaaagatatcaatagtatttgcttctctcccaatgataaactttta
gcaacgggctcacaggacaagacagccaagctttggagtgtagaagacctttctttagtt
ggagttttacgtgggcaccgcagaggtgtttggtgtgtgcgattttctcctgtagatcag
atggtcctaaccacatcagcagattgtactatgcgtttgtggtctttgcaagatttgtcg
tgtattaagaccttcgaaggccatgattcatctgtggtccggggggaatttttatctcaa
ggaaatcaattagttacgggaggagctgatgggcttcttaaattatggcttataaagtca
ggtgaatgtgtctccacctttgatgagcatagtggtcgaatttgggctttgacagtgtca
accactgaaagcgcaattgtgactggaggggctgattccacattagtgacatggaaagat
gtaactgaagaaaagaaacaagctgctattgaagagaaggaaaagttgactcttcaagaa
caacagttgtccaatttaattcacaacaatgagcttctcaaggcccttaaattagctcta
agactgcagagaccacatcaatgtttgacaatagtccaaaatattcttaaaaaaggagac
acaagaggactcagtgaaactttgtcacaacttggaacaagtcagcaggaagatcttttg
aagtatgcagttttgtggaattcaaatggaaagcattgctatacagctcaggctgtttta
tcggttttactagatcacatttcttctggaaaactgagattagaaggattaagagctacc
ctagagggtcttttgccttacactgacagacacatgcggcgactatctgagttacaacaa
gatcttcatctcctagcctttactgccaattgcatgcagcctcatgcttcatga

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