Thrips palmi (melon thrips): 117640126
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Entry
117640126 CDS
T08251
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117640126
09123 Folding, sorting and degradation
03018 RNA degradation
117640126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117640126
03041 Spliceosome [BR:
tpal03041
]
117640126
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117640126
mRNA degradation factors
5'-3' decay
Lsm complex
117640126
Spliceosome [BR:
tpal03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117640126
Complex C
U2 snRNP components
117640126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
117640126
NCBI-ProteinID:
XP_034232280
UniProt:
A0A6P8Y6T8
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSVCGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAAVPTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctactcgttcttcaagtctttagtggggaaggatgttgtcgtggaacttaaa
aatgacttaagcgtatgcggaaccctacattctgttgaccaatacttaaatatcaagcta
actgatatcagtgttactgaccccgataaatatcctcatatgctgtcagtaaagaattgc
ttcattcgcggctcagtagtcagatacgttcagttacctgctgatgaagtggatacccag
cttttacaagatgctgctcggaaagaggctgcagtaccaactcgataa
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