Thrips palmi (melon thrips): 117640344
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Entry
117640344 CDS
T08251
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117640344
Spliceosome [BR:
tpal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117640344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
117640344
NCBI-ProteinID:
XP_034232676
UniProt:
A0A6P8Y960
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MWYAVQSKMAADSGMETCPSPDNPENKKRPWDGNDENGTTKRSHYGAGGSNDGVYHFKIL
VPSVAAGAIIGIGGETIGQLQKDTKARVKMSKAGDFYPGTAERVCLISGNAESIMEVLTF
IMEKIRDRPDFSKATPTHTPVQNDSFDNKISQEREKQVKILVPNSTAGMIIGKGGSYIKQ
IKEESGSYVQISQKAKDVSLQERCITVIGELDQNQKACLMILQKVMEDSLSGTCLNVSYA
DIAGPVANFNPRGSPYAITTHTPSQPGTLQSGFNSTTSLNSIASGNALGNGINLSLNLSA
PNSATGSALTSQLLEHIKVTLRSSGYSDLATSEIIASMAVLARYGILGMGLGLAGTAPVQ
HRATGLPAGSYLGVPMDSAPAQVPSLASGRDSGVFGPIGTITGLGPAASTPRTNVKDRFG
DAGDVGGFDMFLRSPAHSALSTSLNNNSFGLGTSGQSLEHSPTPADPKDGRKVDIEIPEL
IVGAILGFGGRSLVEIQHLSGASIQISKKGQYAPGTRNRIVTISGMPNAIQTAQYLIEQR
VSEEEAKRARQNQIGGLLVN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtggtatgcagtgcaatccaagatggcggcggattcgggaatggagacgtgtccgtcc
ccagataatccggaaaacaagaaaaggccgtgggacggaaacgatgaaaatgggacgacg
aagaggtcacattacggtgcaggaggaagcaatgatggagtgtaccacttcaaaattctc
gttccaagtgtggcagctggagccatcattggcatcggtggtgaaaccattgggcagttg
cagaaggacacaaaagcacgtgttaaaatgtcaaaagctggagacttctacccaggaact
gctgagcgagtttgtttaatatcaggcaatgcagaatctattatggaagtgctcactttc
attatggaaaaaatccgagacaggccagacttcagtaaagcaactcccactcatactcct
gtacaaaatgactcatttgataacaaaatcagccaagagagggaaaagcaggttaaaatt
ttagtccccaacagtacagcgggaatgattatcggaaaaggtggtagttacatcaaacaa
attaaggaagaaagtggctcatatgttcaaatatcacagaaggcaaaggatgtctctctc
caagagcgttgcattacagttattggtgaacttgatcagaaccagaaggcatgtttgatg
attcttcaaaaggtcatggaggattctctcagtggtacttgtttaaatgtgagctatgct
gatattgctggccctgtagccaatttcaatcctcgtggctctccttatgccatcacaaca
catacaccttctcagcctgggactctacagtcaggtttcaattccactacaagtttaaac
tcaattgcctcaggaaatgcattaggaaatggcatcaatctcagtttgaacctaagtgct
cctaattcagcgactggttcagccctaacgtctcaattactggaacacattaaggttaca
ctacgctccagtggatattctgatttggcaacatcagaaattattgcatccatggccgtt
ttggcacgttatggaattcttggcatggggttggggcttgccggaactgcccctgttcag
caccgggcaacagggttgcctgctggtagctatcttggtgttccaatggactctgcacct
gcccaggtaccaagcctcgccagcggccgtgatagcggtgtgtttggacccattggcact
attactgggctagggcctgctgccagtactccccgcacaaatgtcaaagataggtttggt
gatgcaggtgatgtcggaggatttgacatgttcctccgcagcccagctcattctgccctt
tctacgtcacttaacaataactcatttggactgggtaccagtggacaatctcttgaacac
agtcctaccccagcagatccaaaggatggtcggaaggtcgatattgagattcctgagttg
attgttggggccatactggggtttgggggtaggtcactagtggaaatccaacaccttagt
ggagcatcgatacagatctcaaagaaaggccagtatgctccaggaaccagaaatcgcatt
gtgacaatttcaggcatgccaaatgctatccaaactgcacagtacctcatagagcagcgt
gtcagtgaagaggaggccaaacgcgcccgtcaaaatcagattggaggcctactagttaac
taa
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