KEGG   Thrips palmi (melon thrips): 117640464
Entry
117640464         CDS       T08251                                 
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03420  Nucleotide excision repair
tpal03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    117640464
   03460 Fanconi anemia pathway
    117640464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpal03032]
    117640464
   03400 DNA repair and recombination proteins [BR:tpal03400]
    117640464
DNA replication proteins [BR:tpal03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    117640464
DNA repair and recombination proteins [BR:tpal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117640464
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 117640464
NCBI-ProteinID: XP_034232869
UniProt: A0A6P8ZI26
LinkDB
Position
Unknown
AA seq 909 aa
MLPYENQIFLDVLHEDGLVVAARGLGLHSVLISLLKVWCDPGNLVLVLGTQAQEEEYFIK
QLETQGISPLPRIINNETNANERETIYLQGGVLFMSARILVVDLLKNRVPVENVTGVLVC
RAHAILESCQEAFAVRLYRQKNKKGFVKAFSSSAQSFTVGFAQVERIMKTLFVKNLYLWP
RFHAVVAASLKKVSVVELHVGMTSPMQRLQNCVLDLMSFCVKEMKRVNPTLDTDDLTVEN
AISKSFHKLLQYQLDPIWNQLSAKTRQLVADIKTLRSVLRCLTQYDSVTFNTLVTSLRST
EYARRSSGWLLLDPAEDLFLLARQRVVGTKPAANESDIDPEHSPKWVALSEILGEVQTKL
KELNPSDAPHGVNHILVLVEDTRTGNQIKEYLTKGSKLMLQSLYRRATRHRTPAVTAQFG
LAGDTGNKKRKSMDPDDPDAELNEEVMEEFNHDAFGFPEDHEDEDIRDSYCLTMTQQNPS
NEDSGKESLENMSYFEEQSDVDNLPPSQSECMLPIITIQSFKKDGDPLALTRTLEQIQPH
TVVMYDADLAAVRQLEVFQSSTPGVDLTVYFLMYGGSVEEQAYLTTLRQEKEAFEYLIKE
KATMVVQADQDGKSGDCAELRRDVGQSASAAAGLPNVNTRKGGIPKAPSSTPTIIVDMRE
FRSELPALIHRRGIEIEPVTINVGDYILTPEICVERKSVSDLIGSLNNGRLFTQATAMTR
HYSKPMLLIEFDHKKPFALQGRYYLSNDVSASDISSKLILLTMHFPRLRLVWSPSPYATA
QLFEELKEGREQPNATQAAMIGAEVASGDDEFAEKYNIAIQDFMLKLPGVNTKNIHYVLR
KGQSLSHLLTLSKEQLAELTLNSQDADLLYSALHDVHKPTEDGSNANKNSVRGKTGRWRG
RSFLNRKKK
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgctgccttatgaaaaccaaatatttcttgatgtgttacatgaagatggacttgttgtt
gcagctaggggtttgggattgcattcagtccttataagtctgctgaaggtttggtgtgac
ccagggaatttggttttggttcttggtactcaagctcaagaagaggaatatttcatcaag
cagcttgagacgcaaggtattagtccacttcctcgaataatcaacaatgaaacaaatgca
aatgaaagagagaccatatatcttcagggaggtgttttatttatgtctgccagaattttg
gtggttgacttgttaaaaaatagagtgccagttgaaaatgtgacaggggttttggtctgt
cgtgctcatgccattctagagtcctgtcaagaagcatttgctgttcgattatacaggcaa
aagaataagaaaggatttgtgaaagccttttcaagctcagctcaatccttcactgtaggc
tttgctcaagttgagcgcatcatgaaaacattgtttgttaaaaatttgtacttatggcct
cgatttcatgcagtggtggcagcaagcttaaaaaaggtttcagttgtagaactccatgtt
ggcatgacaagccccatgcagcgccttcaaaattgtgtcttggatcttatgagcttctgc
gtcaaggaaatgaagagagttaatccaactctggatacagatgatctaactgttgaaaat
gctatatccaagtcttttcataagctgcttcagtatcagttagatcccatatggaaccag
ttaagtgccaaaactcggcaacttgtagccgatatcaaaacattgagatctgtgctgagg
tgtctgacccaatacgatagtgtcacttttaatactttagtcacctctctaaggagtact
gagtatgctcggagaagctctggttggcttctgcttgatccagcagaggatctatttctt
cttgccagacagagagttgtgggcactaaaccagcagcaaatgaatcagacattgatcct
gagcactctcctaaatgggttgctttgtctgagatactgggagaagttcagacaaagctt
aaagagttaaatccttctgatgctccacatggtgtgaaccacattcttgttttagtggag
gatacacgcactggaaatcaaataaaagagtatctaaccaaagggtccaagctaatgctg
caatcattgtacagaagagccacacgccatcgcacacccgcagttacagctcagtttggt
ttagctggagacactggaaacaaaaaaagaaaaagtatggatccagatgatccagatgct
gaattgaatgaagaagttatggaagaattcaaccatgatgcctttggattcccagaggac
catgaagatgaagatattcgggacagttattgccttactatgactcaacagaatccatcc
aatgaggatagtgggaaagagagtttagaaaacatgtcctattttgaagaacaatctgat
gtggataatttacctccgagtcagtcagaatgcatgttaccaataattaccattcaatca
tttaaaaaagacggagatcccttagctttaacacgaactttagaacagatccaacctcat
actgttgttatgtatgatgcagatttagctgcagtgagacaactggaggtctttcaaagt
tctacacctggagttgatttaacagtttatttcctcatgtatggaggctctgtagaggag
caggcttatctaacaacattgagacaggagaaggaagcatttgagtatttaatcaaggag
aaggcgactatggtggtacaagctgatcaggatggcaagtcgggagactgtgctgaattg
cgacgtgatgttggtcaatctgcatctgcggcagctggactaccaaacgttaacactcgt
aaaggtggcattcctaaggctccctcgagcactccaacaattattgtggatatgagagaa
ttcagaagtgagctgccagctttgatacatcgtcgaggcattgaaattgaacctgtcacc
ataaatgttggagactacatccttacacctgaaatttgtgttgaacgcaaaagtgtcagt
gatttgattggatctcttaacaatggccgtcttttcacccaagctacagccatgacacga
cattattcgaagcccatgcttctaattgaatttgatcataagaaaccatttgctcttcaa
ggccgttactatttaagtaatgatgtatctgccagtgacatttcatccaaattgattctg
ctgacaatgcattttccccggttgcgtctagtgtggtcgccaagcccatatgcaacagca
cagctttttgaagagctgaaggagggccgagagcagcctaatgcaacccaggctgccatg
attggtgcagaagttgcaagtggagatgacgagtttgctgaaaaatacaacattgccatt
caggattttatgttgaagctgcctggtgtgaatacaaaaaatattcattatgtgttgaga
aaaggacaatctctttcacatctcctaactctttctaaagagcagcttgctgaactaact
ctgaacagtcaggatgcagatcttctttattctgctctacatgatgtgcacaagccaact
gaagatggaagtaatgccaacaaaaattctgttcgtggaaaaactggacgatggaggggt
cgaagtttcttaaaccgtaaaaagaagtga

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