Thrips palmi (melon thrips): 117640634
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Entry
117640634 CDS
T08251
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117640634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117640634
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117640634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117640634
NCBI-ProteinID:
XP_034233224
UniProt:
A0A6P8ZI97
LinkDB
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Position
Unknown
AA seq
434 aa
AA seq
DB search
MSDMADEPNNDDQWLYGDSLGDSQDANNEASEEKKLEKLTSGGDINTSMDQPLREENSTE
PAAESESNAAEEPRASEDNDDKNEGEIDDDDNDDDDDSDDDVNVVIGDIKTTPATYSTLN
IKRTGLLTSSGGIDKLKQPGKFSIEEFEQIGTINGMPTHEYNLDSLEDKPWRKPGADITD
YFNYGFNEETWRAYCERQKRMRVHESGVGLGPLAGPPPGRKMGGSIDVIGSGGGTLASRR
NTDRDTPPKENVIQVMTADRREYSRKNPGFPDMSVPPPSGLPPTFDVPPPIPVAGPFPSQ
PRIHPPAPYGPDQFYSPDTDPYYQSYEPTQEQQWMGHQDPFGPRDEALSGIPGPTSSSLK
SKDDKDSPKSSRDRDRDRSERDKEKHRSHRHRSRSRSPSERKRRHKSRSRSPSHRSHRKK
KSKKSDKSKEEDSD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatggctgacgagccaaataatgacgatcagtggctgtatggagattccttg
ggcgattctcaggatgccaataacgaagcttctgaggagaaaaagttggagaaactgacc
tcaggaggggacataaacacatccatggaccagcccctgagagaggaaaattcaacagag
ccagcagctgaatcagaaagcaacgctgccgaagaacctcgagcttcagaggataatgat
gataaaaatgagggagagattgatgatgatgataatgatgacgatgatgacagtgatgat
gatgtcaatgttgtcattggtgatattaaaacaaccccagccacttactcaactctcaat
attaaaagaactggcctcttaacttcatctggcggaattgacaagttgaagcaacctggg
aagttctctattgaggaatttgaacagattggcaccataaatggcatgcccactcatgaa
tacaatcttgattctctggaggacaagccatggcgtaaacctggtgctgacataacagat
tacttcaactatgggtttaatgaagaaacgtggcgagcatactgtgagcggcagaagagg
atgcgtgtccatgaatctggagttggcttgggaccattagcaggtccccctcctggtcgc
aagatgggaggcagcattgatgtcattggaagtggaggtggcaccctagcttcccgtcgc
aacacagacagagacactcctcccaaggaaaacgtcattcaggtgatgactgcagaccgc
agggaatatagtcgaaagaatccaggattccctgatatgtctgtgccacctccgtcaggg
ttgcctccaacctttgatgtacctccaccaataccagtagctggtccatttccttctcag
ccacgaattcatcctcctgcaccgtatggcccagaccagttttactctcctgacactgat
ccatattaccagtcctatgaaccaactcaagagcagcagtggatgggccatcaggatcca
tttggacctagagatgaagctctttctggtatacctgggcccacaagctccagtttaaaa
tcaaaggatgacaaagatagtccgaagtcgagtagggatagagatagagatcgatcggag
agggacaaagagaaacacagatctcaccgccatcgttcgagaagccgaagtccatctgaa
agaaaaaggaggcataaaagtagaagcaggagtccaagtcatcgtagtcatcgcaaaaag
aagtccaagaagtctgacaaatccaaagaggaagatagtgactga
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