KEGG   Thrips palmi (melon thrips): 117640855
Entry
117640855         CDS       T08251                                 
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117640855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpal03019]
    117640855
Messenger RNA biogenesis [BR:tpal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     117640855
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_Vps41 NBCH_WD40 eIF2A Beta-prop_Nup120_160 Beta-prop_SCAP Cytochrom_D1 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Tricorn_2nd Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR41 WD40_like Beta-prop_DCAF4 Beta-prop_DCAF12 Ge1_WD40 Beta-prop_RIG_1st WD_LRWD1 CFAP43_N Beta-prop_WDR75_2nd PROPPIN B-prop_COPA_B_2nd Beta-prop_IFT122_2nd Nucleoporin_N PALB2_WD40
Other DBs
NCBI-GeneID: 117640855
NCBI-ProteinID: XP_034233684
UniProt: A0A6P8ZII9
LinkDB
Position
Unknown
AA seq 324 aa
MYSLLHRKENAHDDSIWTVAWGKVTRKEQEKENGENHDENSRDSIHRDPPGEFIVTGSVD
DLVKVWRFHNDRLELEHRLEGHALGVVSVAISSDGNMCASTSLDSTLRLWDLVSGEKIGS
MDVGSVDIWTCAFSPDDKFVISGNHAGKINMYGVESKKQEQVLDTRGKFALSIAYSPDGK
YIASGAIDGMIDIFDVASGKLVHALEGHAMPIRSLCFSPDSQLLLTASDDGHMKLYDVQH
ANAVGTLSGHASWVLSVAFSQDKNHFVSSSSDNTVKVWELKERQCISTLSVHTDQVWGVK
YNPEGNKIVSCSADKSINIYDCPT
NT seq 975 nt   +upstreamnt  +downstreamnt
atgtattctttactacataggaaagaaaatgcccatgatgacagcatttggacggttgct
tggggtaaagtgaccaggaaggagcaggaaaaggagaatggtgaaaatcatgacgaaaac
tccagagactccattcatcgtgatcctcctggtgaattcattgtgactgggagcgttgat
gatttagtgaaggtatggagatttcacaatgatcgcttagaactggaacacagattggaa
gggcatgcccttggagtagtatctgtagccattagctctgatgggaatatgtgtgcatca
acatcattagattcaactttgcgtctttgggatcttgtctctggtgaaaaaattggttcc
atggatgttggatctgtagatatttggacctgcgccttctctcccgatgacaagtttgtt
atttctggaaaccatgctggtaaaattaatatgtatggtgttgagtcaaaaaaacaagaa
caggttctagacacaagaggaaagtttgcactgagcattgcttatagccctgatggcaag
tatattgctagtggtgctattgatggtatgattgatatttttgatgttgcgtcggggaag
ttggtgcatgccttggaaggtcatgctatgcctattcggtcactctgtttctcaccagac
tctcaactcctattaactgcttctgatgatggtcatatgaaattgtatgatgtgcaacat
gccaatgctgtcggcacactctctggacatgcttcatgggtactcagtgttgcctttagc
caggataagaatcactttgtatcaagttcctctgataacacagtaaaggtgtgggaattg
aaagagcgccagtgcataagcacactctctgttcatactgatcaggtttggggtgtgaaa
tacaatcctgaaggaaacaaaattgtttcttgctctgcagacaagtctataaacatctat
gactgccctacatag

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