Thrips palmi (melon thrips): 117640855
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Entry
117640855 CDS
T08251
Name
(RefSeq) WD repeat-containing protein 61
KO
K12602
WD repeat-containing protein 61
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117640855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117640855
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117640855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Beta-prop_Vps41
NBCH_WD40
eIF2A
Beta-prop_Nup120_160
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR41
WD40_like
Beta-prop_DCAF4
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_RIG_1st
WD_LRWD1
CFAP43_N
Beta-prop_WDR75_2nd
PROPPIN
B-prop_COPA_B_2nd
Beta-prop_IFT122_2nd
Nucleoporin_N
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
117640855
NCBI-ProteinID:
XP_034233684
UniProt:
A0A6P8ZII9
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MYSLLHRKENAHDDSIWTVAWGKVTRKEQEKENGENHDENSRDSIHRDPPGEFIVTGSVD
DLVKVWRFHNDRLELEHRLEGHALGVVSVAISSDGNMCASTSLDSTLRLWDLVSGEKIGS
MDVGSVDIWTCAFSPDDKFVISGNHAGKINMYGVESKKQEQVLDTRGKFALSIAYSPDGK
YIASGAIDGMIDIFDVASGKLVHALEGHAMPIRSLCFSPDSQLLLTASDDGHMKLYDVQH
ANAVGTLSGHASWVLSVAFSQDKNHFVSSSSDNTVKVWELKERQCISTLSVHTDQVWGVK
YNPEGNKIVSCSADKSINIYDCPT
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtattctttactacataggaaagaaaatgcccatgatgacagcatttggacggttgct
tggggtaaagtgaccaggaaggagcaggaaaaggagaatggtgaaaatcatgacgaaaac
tccagagactccattcatcgtgatcctcctggtgaattcattgtgactgggagcgttgat
gatttagtgaaggtatggagatttcacaatgatcgcttagaactggaacacagattggaa
gggcatgcccttggagtagtatctgtagccattagctctgatgggaatatgtgtgcatca
acatcattagattcaactttgcgtctttgggatcttgtctctggtgaaaaaattggttcc
atggatgttggatctgtagatatttggacctgcgccttctctcccgatgacaagtttgtt
atttctggaaaccatgctggtaaaattaatatgtatggtgttgagtcaaaaaaacaagaa
caggttctagacacaagaggaaagtttgcactgagcattgcttatagccctgatggcaag
tatattgctagtggtgctattgatggtatgattgatatttttgatgttgcgtcggggaag
ttggtgcatgccttggaaggtcatgctatgcctattcggtcactctgtttctcaccagac
tctcaactcctattaactgcttctgatgatggtcatatgaaattgtatgatgtgcaacat
gccaatgctgtcggcacactctctggacatgcttcatgggtactcagtgttgcctttagc
caggataagaatcactttgtatcaagttcctctgataacacagtaaaggtgtgggaattg
aaagagcgccagtgcataagcacactctctgttcatactgatcaggtttggggtgtgaaa
tacaatcctgaaggaaacaaaattgtttcttgctctgcagacaagtctataaacatctat
gactgccctacatag
DBGET
integrated database retrieval system