Thrips palmi (melon thrips): 117640892
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Entry
117640892 CDS
T08251
Name
(RefSeq) zinc finger protein swm isoform X1
KO
K13192
RNA-binding protein 26
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpal01009
]
117640892
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117640892
03041 Spliceosome [BR:
tpal03041
]
117640892
Protein phosphatases and associated proteins [BR:
tpal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117640892
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117640892
Spliceosome [BR:
tpal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117640892
BRITE hierarchy
Motif
Pfam:
Nup35_RRM_2
Nup35_RRM
PWI
zf-CCCH
RRM_1
zf_CCCH_4
zf-CCCH_2
CENP-H
Motif
Other DBs
NCBI-GeneID:
117640892
NCBI-ProteinID:
XP_034233761
UniProt:
A0A6P8YBV4
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MIVPNPEALKTWLARVLEPLCDADPAALAKYVFALVKKDKPLQELKDSMVEQLEVFLQSE
TKRFVALLFLVLEKDDYTLPVPTTLSQLASGESPSSTTEVDVKVKQEVKIKQEPLSTPTV
APALEPQPKVAPTPQSTSQPTVSSSTSASANSASATPSSSTVAVASVVQVNGTTANSAPA
AGYSGRSSHRKSDSDRDEKNRSARSTRHSSPPRNRSRSRSWDRSRRSRSRDKDRDRLRER
DRSRWRNKSPPARRYDRDRRRSWSRTRGGSRSRSRSPRHGSGFRSRYRRSPHGRVSLSRS
RSHSNERKKEPLSGTATPTQDSNHGDSDRVIPPSQSIQSVVSQVPKRRCRDFDEKGYCMR
GDLCPYDHGSDPVVLEDVSLSRVLPYEGGPAQPGAGPPGSGVPNDIGGLQSTIAVAPSGP
GVMGGAQPPPSMVQMTGHMPPFHHTRFPPPPPVPAAMEYNPDAPSMEPRMTWNRMPPRGG
PGNRGRMVRGPLPPQNMYNPVGQQQTRELVSVPLNDHSGPMMGHHPGGGMGFKRPMHQDN
NQNYPMHGETLALDGHSPLKRRHGFDYGRLGPAGTRMKHNQGNCSLDVKKIPRNMNNITH
LNNHFTKFGKIVNIQVQFEGDPEAALVTFSSHAEANAAYRSTEAVLNNRFIKVFWHNNNN
GAVGHEAKQENLPPMKPSVKDRLGAQVPPMQVKVMNAKVAPQLTEEEIEEQVMMSGNSLT
KTLYIKKEVTPAPVLATHVNKAQAVAQAQAQQAAAAAAMKAKLQEVAVAKQNLKKKQEEK
RREALQITADLRKRKQDLLEKQLDQQKQLIQRLEKQDITKEQRQDVMTTIKSLQESVEKI
RKDLAAVVGNTNNNVKVPSLKTAKPPPVAKAPTPNLVKKTIEEAQREILDAELDIIAKQQ
EGEDVAELQRKVVILKMEAANQAIVQSPNKPMRGSLRTVRGRGVPRPLATRNPALYRTGV
RRGGFTGHSVDHRPSKILVSGYEEDDKVDVLAHFAQYGQIVDHESDDAIPSLVLNYKSRK
EAELAMTKGRNFGDRLLSITWHASVPRPGRSAHPHLLSTVHLNSHRRQVMMVGESGELID
DGEGAAEDEEELVGLDLEPSEEALLLDDEEDDEDGEDRSWRR
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgcctaatccagaggcattaaaaacttggttagccagggtgctggaaccattg
tgcgatgcagatcccgcagctcttgccaaatatgtatttgctctggtcaagaaagacaaa
cccttgcaggagctcaaggacagtatggttgagcaattagaagtcttcctgcaaagtgag
acaaagcgattcgtggcattgctcttccttgttttggagaaagatgactacactctgcca
gtaccaacaacactctctcaattggcatctggcgagagtccttcatccacaaccgaggtg
gatgtgaaagtcaagcaggaagtcaagatcaagcaggagccactttcaacacctacggtt
gctccagcattagaacctcaacccaaagtagcacctactcctcagagtacaagtcaaccc
acagtttctagtagtacatctgccagtgccaactcagctagtgcaacaccaagcagctcc
actgttgctgttgctagtgttgtccaggtcaatggaactacagcaaattctgcacctgca
gcaggctacagtggcagatcttctcacaggaaatcggactctgaccgagacgagaaaaac
cgctcggctaggtcaacacgtcactcctctccgcccaggaatagatcacgctcccgctca
tgggatagatcaaggcggtcgcgcagccgggacaaggaccgggacaggctgcgcgagcgc
gaccgcagccgctggcggaacaagtccccgcccgcgcgaagatacgaccgcgatagaagg
agaagctggtcgaggacgagagggggctcgcgttcaagatcaaggtctcctcgccatggg
tcaggatttagaagtaggtatcgccgttctcctcacggtagagtttcattgtctcgctcc
agatcacactcgaacgaacgcaagaaagaaccattatctggtacagcaacaccaacgcaa
gacagtaaccatggagattcggaccgtgttattcctccatctcaaagtattcaaagtgtt
gttagccaagtgccaaagcggcgatgtcgggacttcgatgaaaagggatactgcatgcga
ggagacttgtgtccctatgatcatggatctgatccagttgtgttggaggacgtgtccctg
tcacgagttcttccatatgagggtggaccggcccaacctggtgcaggcccaccaggctca
ggcgttccaaacgacattggtggacttcaaagtacaattgccgtggctccttcgggtccc
ggtgtcatgggtggagcccaacccccaccatctatggttcaaatgactggccacatgcct
ccattccaccacaccaggttccctcctcctcctcccgtgccagcagccatggagtacaac
ccagatgctccaagcatggagcctcgaatgacttggaataggatgccaccaaggggagga
cctggtaaccgcggtcgtatggttcgcggtcctcttcctcctcaaaatatgtacaatccg
gtcggtcaacaacaaactcgggagcttgtctctgtgcctctcaacgaccattctgggcca
atgatgggtcaccaccctggaggtggtatgggtttcaagagacccatgcatcaagacaac
aatcaaaactacccaatgcatggagagactctggctttagatggacactcgcccctcaag
aggcgtcatggctttgactatggtcgattaggcccagctggaacaagaatgaaacacaac
caaggaaactgttcgttggatgtgaagaaaattcctcgcaatatgaacaacattactcat
ttgaataatcactttacaaagtttggaaaaattgtcaacatccaagttcagtttgaagga
gatcctgaagcagctcttgtcacattttcctctcatgctgaagctaatgctgcttatcgg
agcactgaagctgtgttaaacaaccgcttcatcaaagtgttttggcacaataacaacaat
ggtgctgttggccatgaggctaagcaagagaatctacctcccatgaagccttctgttaag
gacagattaggagcccaagtgccacccatgcaagtgaaagttatgaatgccaaggtagcc
cctcaacttactgaggaagagatagaggagcaagtcatgatgtctggcaacagcctcacc
aagacattgtacatcaagaaggaggtgactcctgccccagtgctagctactcatgttaac
aaggcgcaagctgtcgcccaggcacaagcccagcaagcggcggctgcagcggctatgaaa
gctaaattacaggaggtggccgttgctaaacaaaatttgaagaagaaacaggaagagaaa
cgccgtgaagcccttcaaataactgctgatttaagaaaacgtaaacaagacctgttagaa
aaacagctggatcaacaaaagcagcttatccaaagacttgaaaaacaggatataactaaa
gaacagcgccaagatgtaatgactacaattaagtccctacaagaaagtgttgaaaaaatc
cgcaaagatttggcagcagttgtagggaacacaaataacaatgttaaagttccttctctg
aaaacggctaaacctcctccggtagcaaaggctcctaccccaaacctagtcaagaaaaca
atagaggaggcacaaagagaaattttggatgctgagcttgatatcatagccaaacagcaa
gaaggtgaggatgttgcagaactacaacggaaagttgtcatcctgaagatggaagcagct
aaccaggcaattgttcaatctcccaataaacctatgcgcgggtcgctccgaactgtccgt
ggacgaggtgtacctcgtcctttggccacccgcaatccagctttgtatcgcactggggtg
cggcgaggtggtttcaccggtcatagtgtagatcacaggccatccaaaatcctcgtgtca
ggctatgaagaggatgataaagtcgatgtcttggcccattttgcacaatatggacagatt
gttgatcatgaaagtgatgatgccatcccatccttagtccttaattataagtccaggaaa
gaagcagagctggcaatgacaaaaggtagaaactttggggataggctgctgtccattacc
tggcatgctagtgtgccaaggcctggtcggagtgcacatcctcatcttttgtcgactgtt
catctcaactctcatcggagacaagttatgatggtgggcgaatcaggagagctcattgac
gatggagaaggtgctgctgaagatgaggaagagctcgttggtttggatcttgaacccagt
gaagaagcgttgctgcttgatgacgaggaagacgatgaagacggtgaagaccgcagttgg
cgtcgataa
DBGET
integrated database retrieval system
