Thrips palmi (melon thrips): 117640908
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Entry
117640908 CDS
T08251
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03250
Viral life cycle - HIV-1
tpal03272
Virion - Hepatitis viruses
tpal04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117640908
03272 Virion - Hepatitis viruses
117640908
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117640908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117640908
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpal04147
]
117640908
Membrane trafficking [BR:
tpal04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
117640908
Exosome [BR:
tpal04147
]
Exosomal proteins
Proteins found in most exosomes
117640908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
PPP1R21_helical
NCH2
Motif
Other DBs
NCBI-GeneID:
117640908
NCBI-ProteinID:
XP_034233791
UniProt:
A0A6P8YBX9
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MAEFISVPLKKPTDVDIIKPLKNLISASFSTADKPEDYGDAISELSKIRNNAVWRVFEKY
ESSLEVIYMYYDQLCALEAKVPAHEVQIPFKWKDAFDRGTFFGGRISLTVSSLSYEKVCV
LFNIAALQSAVAASQSLVSDEGLKLAAKLFQLSAGIFHHLKGTVMLAIQQDPTPDLNPDT
LAALSAIMLAQAQEMFVQKAIHDNMKPAVIAKLCAQCEEYYSEAMKAMQKEQLKPLWERE
WISLIAGKQASFHGLTEYYQGLVAHENKAIGEEISRLEKAVELLKAGQQRSGHPSLFEEL
TNKATRALNDAKKDNDFIYHERIPDYKNLPPVAKAAIAKALPLPERLSHNFKDLFENLVP
VTVHQAMAAYDVRKSEIVNGEVSKLRDATNMLNSILASLNLPAALEEESGAAVPHSLVDK
SNAVIALGGVTALQNQITDLPELLQRNRDILVEAERLLNQEQEQDDQLRERFKSWNRTPS
VKLTETFRANLAKYREIINTAVQSDKVVREKFDTHVKAMELLSGGESAMSEALPSGSSGG
VSSTSAAYRRLKELMEDVEVIKAERAAIESELKSATIDMKSTFLSALAQDGAINEAAISM
ESLGRAFSPLQQQVKDSLQRQERLVAEIQTKNNEFVLEKNSAGGASQHREQMLMQLAAAH
DAFMELQSNLKEGNKFYNDLTQLLVVFQNKISDFCFARKTEVNELVENIANEKPGEGISD
AKKAAPPRPPPPASSPSSAPAAQPGPSSAGPQLPYPAYPVGMPVPYGASNNMPYPTYVPP
PMPQSYNPYATMGNVPYPQQGENSQVPPLPSATDLAQPCSKHGGDRTPAAPDCTIC
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatttatttcggtgccactaaagaagccgaccgatgtagatattatcaaacca
cttaaaaacttaatatccgcttcttttagtacggcagacaagccggaagattatggtgat
gcgatttcagaactcagtaagattcggaacaatgccgtctggagggtattcgagaagtac
gagagctcactggaggttatttacatgtattatgatcaattgtgtgccctggaggccaaa
gttcctgcacatgaagttcaaatacccttcaaatggaaggatgcatttgatagaggaaca
ttttttggtggtagaatcagcctaactgtgtcttccttgagctacgaaaaagtttgtgtc
ctttttaatatagctgccttgcagagtgcagttgcagcgtctcaaagcttagtcagcgac
gaaggactgaaactcgctgctaaactatttcagttatctgctggaatttttcaccatctc
aagggaactgtgatgctggcaatccagcaggacccaacccctgatctgaacccagatacc
ttggctgctttgagtgctataatgcttgctcaagctcaagaaatgtttgtccaaaaagcc
attcatgataacatgaagcctgctgttattgctaagctttgtgctcaatgcgaagaatat
tattctgaagccatgaaagccatgcagaaggaacaattaaagcctttgtgggaacgagaa
tggatttctctgattgctggaaaacaagcatctttccatggtttgactgagtactatcag
ggattagtagcccatgagaacaaagctattggtgaagagatctctcgcttggagaaagct
gtggagttgttaaaagctggtcagcaacgttcgggtcacccttctctctttgaggaactt
accaacaaggctacaagggctctaaacgatgccaaaaaagataatgacttcatttaccat
gagcgaattcctgactacaaaaatttgccacctgttgctaaagctgctattgcgaaagcc
cttcctttacctgagcgactgagtcataacttcaaagatctatttgagaaccttgtacct
gtcactgttcaccaagccatggctgcatatgatgttcgtaagtcagaaatagtgaatggg
gaagtgtccaagttgagagatgctaccaatatgttaaacagtattcttgcatccttaaac
ttaccggcagctcttgaggaagaatcgggcgcagctgttccccactccttggttgataaa
tcaaatgcagtgattgccttgggtggcgtgactgcacttcaaaatcaaattactgatctt
cctgaacttttgcaaagaaatagggacattcttgtagaggctgaaagattgctcaatcaa
gaacaagagcaagacgatcagcttcgtgagcggttcaagtcatggaaccgcactccatct
gttaagctgacggaaacattccgtgccaacttggctaagtatagggagatcataaacact
gctgttcagtcagacaaggttgtccgtgagaaattcgacacccatgtgaaagcgatggag
ttactgtctggaggcgaaagtgcgatgagcgaagctctaccaagtggcagtagtggtggt
gttagttcaactagtgctgcataccgcaggctcaaggaactcatggaagatgtggaggtt
attaaggcagagcgggctgcaattgaatcagaattgaaatcagcaaccatcgatatgaaa
tcaacatttttgtcagctttagctcaagatggggctatcaatgaagccgccataagcatg
gagagtcttggcagggctttcagtcccttgcaacagcaagtgaaagattcattgcaacgt
caggaaagactcgttgctgagattcagaccaaaaacaatgagtttgtccttgagaagaac
tctgcaggaggagcttctcaacacagagagcaaatgctgatgcagttagctgctgcacat
gatgcatttatggaacttcaaagcaatttgaaggaaggaaataaattttacaatgacctc
acccagctccttgtggtcttccaaaacaagatttctgatttctgctttgctcgtaagaca
gaagtgaatgaacttgtagagaatattgcaaatgagaagccaggtgaaggaatttcagat
gccaagaaggctgccccaccacgtcctcccccgccagcatcttcccccagttctgcacca
gctgctcagccaggaccttcatctgctgggccccaacttccatacccagcatatcctgtc
ggaatgcctgtcccttatggggcttcaaacaacatgccataccccacgtatgtgcctcca
cccatgccccagagctacaacccctatgccaccatgggcaacgtgccatacccccagcaa
ggtgagaacagccaagtgcctccactgccaagtgccactgacctggcccaaccttgttcc
aaacatggaggggatagaactccagctgcacccgactgcactatttgctga
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integrated database retrieval system
