Thrips palmi (melon thrips): 117640974
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Entry
117640974 CDS
T08251
Name
(RefSeq) protein Smaug homolog 1-like
KO
K27396
protein Smaug
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117640974
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117640974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHAT
SAM_1
SAM_2
TFIIA
HAM1_N
CPSF100_C
MecA
CCDC53
TERB2
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
117640974
NCBI-ProteinID:
XP_034233939
UniProt:
A0A6P8ZIP0
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MYREHLAAVSEWFETLSECEQIVALYSLLKRLAPAQARFLTLAMDQSLENCVELQLAEQQ
ANNPGFVSSLLTESAETAMSQLLQHLPLLRPGNNEARSRYIAVIPRVLSHATGTGSHLEE
ARQLLSYSLIHPALSNDDKRTLNPWLKMMEERITNGGTGVNTPSITADSSPTQQPPQQGP
QASQQGQQQRPGLTISNNGHSHLQFQPNSQPQGGVGNFTNGSQPRVRRSNSLTPPVSIAH
SVELWSSQDDLSGRQKARSFSLSSESGPPLSPQSSQASSGSGSESHLDDLRLQFSSDNCG
MRDIPSWLKSLRLHKYAWLFAQLSYDEMLNLTEEKLATMGVTKGARHKIVLSVRKLRERY
HTLCQLERDVVAGASLSQAMDDLRAVLCSPIKAIDEKDKDSTVEDIPEQFTKVMGKVCTQ
LLVSGRAEEKLLSDFVWLLDRCLQHEAFSAIHKQRLGCWKLQLQHVWRPSPQRHLHNRYK
WHNPHSQSFSVGSHPAVSARFQGIIGQGCPSSQTQPSQLQQQQQQQQQQQQQQQQQQQQQ
QQQTAQQRAATFASLFQSLAPSQQQHRNSLAVIGSPQLGGISEFMAKRPSLQDPLLMEPL
EGHSQLTRTRSAPHKPSQQLGSPDTTLPPISLPSALPPNSNDYDPINSRLESLCLSMTEH
ALGTSLEL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtgaacatctagctgctgtctcagaatggttcgaaaccttgtcagaatgcgag
caaattgttgctctgtattccttgttgaaaagattggctcctgctcaagcccggttcctt
acattggcaatggaccagtcattggaaaattgtgttgaacttcaactcgcagagcaacag
gcaaataatccagggttcgtcagcagccttctaacagaaagtgctgagactgcaatgtct
cagcttctgcaacaccttcctttgctgcggccaggaaacaatgaagctaggtcacgatac
atagcggttatccctcgtgttttgagtcatgcgactggaacaggttcacatctggaagaa
gccagacagcttctctcttattccctcattcatccagctctttccaatgatgataaaaga
accctaaatccgtggcttaagatgatggaagaacgcatcactaatggaggtacaggtgtg
aatactccttccatcactgctgactcctctccaactcagcagccaccacagcaaggacca
caggcatctcagcaagggcagcaacaacgccctggattgactatttcaaacaatgggcat
tctcacttacaattccaaccaaactctcagcctcaaggaggagttggtaactttacaaat
ggtagccaaccaagagtacgccgtagcaacagcctcacaccaccagtgagcatcgctcac
agtgttgaattgtggagctcgcaggatgatctctctggccgccaaaaagctcgtagtttc
tctttgtcatctgagtcaggcccaccactttccccacaaagctctcaagcctcatcaggc
agtggctctgaatcacatttggatgacctcagactgcagttcagcagtgacaactgtggt
atgcgtgatataccatcatggttgaagtctttgcgcttacacaagtatgcatggttattt
gctcaactaagttatgatgagatgttaaacctcactgaagagaagcttgcaacaatgggt
gttactaaaggtgcaagacacaagattgtactaagtgttcgtaaacttcgtgaacgctac
cacactctatgccagttagagagagatgttgtggctggagctagtttatctcaagcaatg
gatgatttgagagcagttttatgctcaccaatcaaagcgattgatgaaaaggacaaagat
tccactgttgaagatattccagaacagttcaccaaggttatggggaaagtgtgtactcag
ctgcttgtatcaggacgtgcagaagaaaagctattgagcgactttgtatggcttctcgac
cgatgcctacagcatgaggccttcagtgccatccacaaacagcgtcttggttgttggaaa
ttgcagcttcaacatgtgtggcgtccatctccacagcgtcacttgcacaatagatacaag
tggcataatcctcactcacagtcattttcagtgggttcacaccctgcagtaagtgcacgt
ttccagggtatcattggccagggctgtccgtcctctcaaactcagccttcccaattacaa
cagcagcagcagcagcaacagcagcaacaacagcagcagcaacaacaacagcagcagcag
caacagcagactgcacaacaacgcgcagcaacatttgccagtctcttccaaagtttggca
ccttcgcaacaacaacatcgaaacagtcttgctgttattggcagccctcaacttggagga
atctctgaattcatggccaagcgtcccagtcttcaagatccacttttgatggagcctctt
gaggggcactctcagctgaccagaacacgttctgctccccacaaaccaagtcaacagtta
ggctctccagacaccactcttccaccaataagccttccatcagcactgccacccaacagc
aatgattatgatcccatcaattctcgtctggagtctctgtgtcttagtatgacagagcat
gcattgggtacatctttggagctttaa
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