Thrips palmi (melon thrips): 117641039 Help Entry 117641039         CDS       T08251                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism tpal  Thrips palmi (melon thrips) Pathway tpal04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tpal00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     117641039  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tpal00536]     117641039 Glycosaminoglycan binding proteins [BR:tpal00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117641039 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Motif Other DBs NCBI-GeneID:  117641039 NCBI-ProteinID:  XP_034234026 UniProt:  A0A6P8YCG8 LinkDB All DBs Position Unknown AA seq 1670 aa AA seqDB search MGVGRTAGLCPQDTAYRLGESTMLTASTAHLFREGFPADFSVVLVVRLKIGTPRCALFTV YDEAGDEQLVVTVGEDVLLFYRVAPEDEDADRDADREKAATVSFGANIADGEWHRLGFSV KGDTVTLVLDCKKHINYALKRGSAQISTSGVVLIGQQLLDEGIFTGDVQALYVSPSPEGA YDMCTSLSTDCSRPPWRASNASDVAAALAMAPNITSVTVPPSVFRRTVAPTAGPAGPLDD LASSLVDVDGQLVDLGGAEGGGFTRHTYGVSPYGSSTPAYNFSEEITEDGDPYLASSSAR GAVGPRGYPGPPGPSGPMGPKGEPGRDGLGGVNGIPGPPGHVFLIPMAQQSGNEKGPDGI ADNFRQLLSQHMMSMRGSEGPTGLTGVAGPEGPPGPEGQKGEPGDVGEQGPRGLRGPQGL PGREGRRGRPGRDGERGATGPPGVKGEQGVPGQPGFPGEKGERGSTGSPGEQGLRGHDGI QGEDGPPGLPGLPGELGPRGFAGPRGFPGMSGPPGIPGTEGGPGPKGATGPPGQPGAPGQ TGNVGPVGPPGPQGQLGPPGLPGPQGKPGIPGLLGADGAPGHPGNPGVPGAKGDQGPAGP QGSVGFPGSRGVKGDEGKRGSPGDKGDKGDRGLDGEKGDFGPKGERGPAGPIGAAGLEGP EGPKGFDGPRGETGPAGPPGEKGKQGMPGTPGYPGPPGDKGDKGSEGRAGQVGDKGERGN TGAAGERGEAGPRGYRGARGRRGGDGTPGPKGDTGQPGPPGAQGERGPQGAEGPRGFIGP QGAAGASGKDGQHGPPGERGPPGEPGPPGSAGSPGVVGPAGPSGEPGPVGEPGTPGHPGL PGEPGQPGDSGKEGAPGPAGPTGKTGPPGGAGLPGFPGERGLQGLPGMPGLKGEAGPIGP PGPTGDKGQQGEAGKEGPPGPEGRKGPQGSPGGPGHKGERGEAGTAGPTGRDGLPGGRGL PGPPGPIGPPGEDGDKGDAGPPGEKGFKGARGETGGLGPVGPQGLRGEPGPIGPLGEKGP PGETGRQGPKGEDGPTGVAGAPGAPGPQGMPGPPGVKGEMGDVGSKGPPGPAGPPGEAGH RGTKGPEGPPGPQGLEGLQGAKGEPGTPGPPGPPGSDGKHGERGPYGPKGEEGHAGVQGP PGPRGSPGPEGPKGNAGPPGFPGPPGEAGLQGPKGDTGLDGDDGKAGDPGPPGEAGPPGK LGLTGPAGKPGPEGAAGLQGSTGPTGEKGDRGPLGAPGLQGPMGQQGEPGPQGPPGGRGS PGAAGEPGASGKAGGEGAPGKAGAEGPRGPKGDRGRRGPKGHRGEMGTPGLKGESGEKGD RGKPGPPGVEGVKGNQGPLGQLGPKGNDGPPGLPGLEGPPGPKGSTGVAGLKGETGPPGP PGPPGTPGEPPLVPPELLFQRENNVKADTRRKREDKDGAKLGDVLEDPKSVDIGPKFIDM YTSIYSMRQDLDRLRKPVGSKENPARTCRDLHYGHPTFDDGWYWIDPNLGMADDAVSVFC NMTGGGETCVYPDVHSREMPNIPWRREGDKNDWYSNLRGGFRITYETIGVVQATFLRLLS ERARQNFTYTCINSAAWLPEGFAQGTKKADKDNALRLLGDDEHVFLANDTGPDRPAVLHD GCKSRKAKSETVFQVMTKKMTHLPIVDFYPVDYGSPHQAFGFHVGPVCFK NT seq 5013 nt NT seq  +upstreamnt  +downstreamnt atgggggtgggccgcacggcggggctgtgcccccaggacacggcttaccgactcggcgag agcaccatgctcaccgcctccacggcccacctgtttagagagggattcccggcagacttc tccgtcgtgctggtcgtccggctgaagataggcacgccgcgctgcgcgctgttcacggtg tacgacgaggcgggcgacgagcagctcgtggtgacggtcggcgaggacgtcctgctgttc taccgcgtggcgcccgaggacgaggacgccgaccgggacgccgacagggagaaggcggcc accgtgtccttcggcgccaacatcgccgatggcgagtggcaccggctgggcttcagcgtc aagggggacacggtgacgctggtgctggactgcaagaagcacatcaactacgccctcaag aggggctcggcgcagatcagcacctcgggcgtcgtcctcatcggtcagcagctgctggat gagggcatcttcacgggcgacgtccaggcgctgtacgtgtcgccgtcgcccgagggggcc tacgacatgtgcacgtcgctgagcacggactgttcgcggccgccctggagggcgagcaac gcctcggacgtggccgcggcgttggccatggcgcccaacatcaccagcgtgaccgtgccg ccatccgtgttccggcgcaccgtggcgcccacggcggggccggcggggcccctggacgac ctggccagcagcctggtggacgtggacggccagctggtggacctgggcggcgcggagggc ggcggcttcacgcgacacacgtacggagtgtcgccgtacggctccagcacgccggcctac aacttcagcgaggagatcaccgaagacggcgacccctacttggcgtcctcctcggcgcga ggcgcggtcggcccgcgaggctacccgggcccgccggggccgtcggggcccatggggccg aagggggagcccggccgcgacgggctgggcggcgtcaacggcatccccgggccgcccggc cacgtcttcctcatcccgatggcgcagcagagcggcaacgagaagggacccgacggcatc gccgacaacttccgccagctcctgtcgcagcacatgatgtcgatgcgaggctccgagggt ccgacggggctgaccggggtggcggggcctgagggccccccggggcccgagggccaaaag ggcgagccgggcgacgtcggcgagcaggggcccagggggctgcgggggccgcagggactg ccgggcagggaggggcgccgcggccggccgggcagggacggcgagaggggcgccaccgga ccccccggcgtcaagggcgagcagggcgttccggggcagccaggcttccccggcgagaag ggcgagcgcggctccacgggcagccccggcgagcagggccttcgcggccacgacggcatc cagggcgaggacggcccgcccggccttcccggactccccggcgaactgggaccgcgcggc ttcgcggggcccaggggcttccccggcatgtccgggccgccgggcatccccggcacggag ggcgggcctggccccaagggcgccacgggcccccccggacagcctggcgccccgggccaa accggcaacgtggggcctgtggggccgcctggaccccaaggacagctagggcctcccggc cttccgggaccgcaaggcaagcccggcatccccggactcctcggtgccgacggcgccccc ggccaccctggcaaccccggcgtgcccggggcgaagggcgaccagggccccgccgggccg cagggctccgtgggcttcccggggtcgcgcggcgtcaagggcgacgagggcaagcggggc agccctggcgacaagggcgacaagggcgaccgcgggctggacggcgagaagggcgacttc gggcccaagggcgagcgggggccggcggggcccatcggcgcggcgggcctggagggtcca gaaggccctaagggcttcgacggccccaggggcgagacaggcccagcaggccctccgggc gagaagggcaagcagggcatgcccggcacccccgggtacccgggccctcccggcgacaag ggcgacaagggctcggaggggcgggccggccaggtcggcgacaagggagagcggggcaac accggagcggcgggcgagcgcggcgaggccggaccgcggggctaccgaggggcgcgcggc cggcggggcggcgacggcacgccggggccgaagggagacaccgggcagccggggccgcca ggcgcccagggcgagcgcggcccccagggcgcggaggggccccgagggttcatcggcccc cagggcgcggcgggggcgtcgggcaaggacggccagcacggcccccccggcgagcgcggg ccgcctggcgagccagggccgccggggtcggcggggtcacccggcgtggtggggcccgcg ggaccgagcggcgagccggggccggtcggcgagcccgggacgccagggcaccctggtctc cccggagaacccggccagcccggagacagcggcaaggagggtgcgccggggccggccggg cccacaggcaagacggggccgcccgggggcgccggcctgccaggattcccaggcgagcga ggactgcaaggactgccgggcatgccggggctcaagggagaggcggggcccattgggccg ccgggccccaccggggacaagggccagcagggcgaggcgggcaaggaggggcctcctgga ccggagggccgcaaggggccccaggggtctccaggcggtcccgggcacaagggcgagagg ggcgaggcgggcactgccggaccgacgggccgtgacggcctgcccggtgggcggggactc ccagggcctcctggtcccatcgggccccccggcgaggacggcgacaagggagacgccggg cctccgggagagaagggcttcaaaggcgccaggggagagacgggcgggctgggccccgtg ggcccccaggggctgcgcggcgagccgggccccatcgggccgctgggcgagaagggcccg cccggcgagacgggccgccagggccccaagggcgaggacggccccacgggggtggcgggg gcgccgggcgctccggggccgcaaggaatgccgggccctccgggtgtcaagggcgagatg ggcgacgtcggctccaaaggtccgcccggaccggctgggccccccggcgaggccgggcat cgcggcaccaaaggaccagaaggaccgccaggcccccagggcttggagggcctgcagggc gccaagggcgagcccgggacgccaggaccccccgggccgccaggatcggacggcaaacac ggcgagcggggtccttacggccctaagggcgaggaaggccacgccggcgtgcagggaccc cccggtcccaggggatccccggggccggagggccccaagggcaacgctgggcccccaggc ttccccgggccgccgggcgaggcggggctgcagggccccaagggcgacaccgggctggac ggtgacgacggcaaggccggggacccagggccgccgggagaggcagggccacccgggaag ctgggactcacggggccggccggcaagccgggccccgagggcgcggccgggttgcagggc agcacgggccccaccggagagaagggcgaccgcgggcccctgggagcccccggcctgcag gggcccatggggcagcagggcgagccgggcccacagggacctcctggcggcaggggttcg cccggagcggcgggcgagcccggggcctcaggcaaggctggcggcgagggcgctccgggc aaggccggcgcggaaggaccacggggacccaagggcgaccgaggccgccgaggacccaag ggccaccgtggcgagatgggcacgccgggactcaagggcgagagcggtgagaagggagac cgcggcaagccaggcccgccgggcgtggagggcgttaagggcaaccagggaccactgggg cagctcggcccgaagggaaacgacggccctcccggacttccaggccttgaagggcctcca gggcccaagggctcgacgggggtggccggcctcaagggggagaccggccctcccggtccg ccaggaccgcccgggacccccggagagcccccactggtgccacccgagctgctcttccag agggagaacaatgtgaaggcggacacgcgcaggaagcgcgaggacaaggacggtgccaag ctcggcgacgtgctggaggacccaaagtccgtggacatcggccccaagttcatcgacatg tacacgtccatctactcgatgcgacaggacctcgacaggctccggaagcccgtcggctcc aaggagaacccagcccggacgtgccgcgatctccactacggacacccgaccttcgacgac ggctggtactggatagacccgaacctgggcatggccgacgacgccgtttccgtgttctgc aacatgacgggcggcggcgagacttgcgtgtacccagacgtgcactcgagagagatgccc aacatcccctggaggagggagggggacaagaatgactggtactccaacctccgcggtggc tttaggataacttacgagacgatcggcgtggtgcaggccaccttccttcgcctgctctcg gagcgcgcgcgccagaacttcacgtacacgtgcatcaactcggccgcctggctgcccgag ggcttcgcgcagggcaccaagaaggccgacaaggacaacgcgctgcgcctgctgggcgac gacgagcacgtgttcctggccaacgacaccggccccgataggccggccgtgctgcacgac ggctgcaagtctcgaaaagctaagagtgaaaccgttttccaagtaatgacaaagaaaatg acgcatctacccattgtggacttctacccagtggattatggatctccacatcaagctttt ggttttcatgtggggcctgtgtgtttcaaatga

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