Thrips palmi (melon thrips): 117641316
Help
Entry
117641316 CDS
T08251
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117641316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_9
LRR_13
LRR_LRWD1
LRR_R13L1-DRL21
LRR_NLRC4
LRR_5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
117641316
NCBI-ProteinID:
XP_034234428
UniProt:
A0A6P8Y4E5
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MFEKCAVLSQFLTAVRRRMRKASRSRGGESSVVAERLADYKGSTGGLNNHQGFECDGDGE
IEIASIVNGTTTMATGSTATAPSVTTQLPLDLQPTEKKLSTAGLDGTKPKVVTVKHPESK
HPKPTVKKCRPLQADLDCCKEFLKNKEEGELRLDLSKSNITMLPPTVRELTHLAELYLYG
NKLSTLPSEIGSLSNLRTLALSENSLTSLPESLSNLKSLRVLDLRHNKLNEIPDVVYQLH
SLTTLFLRFNRIKVVGDDICHLTNLTMLSLRENKIKELPAGIGTLVNLVTFDVSHNHLEH
LPEEIGKCMMLLTLDLQHNELLDIPDSIGELSQLQRLGLRYNRLNGVPQTLSNCKHMDEF
NVEGNAISVLPEGLLSSLSELTTITLSRNNFTAYPSGGPAQFTSVQSINLEHNQIDKIPY
GIFSRARNLTKLIMKENQLTALPLDMGTWLNMVELNLGTNQLTKLPEDIQNLQNLEVLIL
SNNLLRRLPASIGSLRKLRVLDLEENKIETLPNEIGYLRELQKLVVQSNQVSILPRAIGH
LVNLTYLSVGENNLIQLPEEIGSLEQLEQLYINDNANLHNLPFELALCSSLQIMSIENCP
LSQIPADIVSKGPSLVIQYLKLQGPYRAM
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaaatgtgccgtgttatcacagttcctcactgctgtgcggcgtagaatgaga
aaagcgagccggagtcgtggtggggagagcagcgtagttgcagaaagactggcagactac
aagggctcgacgggtggcctgaacaaccatcaggggtttgagtgcgacggcgacggcgag
atcgaaatcgcttcaatcgtgaacgggacgaccacgatggcgaccggctctactgctacc
gcccccagcgtcaccacgcagcttcctttggacctgcagccaacggagaagaaactttca
acagctggcctagacggcaccaaacctaaggtggtgactgtcaaacaccccgagtcaaaa
catcccaagccgacggtgaaaaaatgcaggcctttgcaagcggatctcgactgttgcaaa
gagttcctcaaaaacaaagaggagggagaattgcgacttgatctcagtaagtctaacata
actatgttaccacctactgtgagggagttgactcatcttgccgagttgtatttatatggt
aacaagctgtcaacactaccatcggaaattggcagcctgtctaatcttcgcactctagct
cttagtgaaaactccttgactagtttacctgaatctctatcaaatctgaaaagtttaagg
gttttggaccttcgtcacaacaagctgaatgagatccccgatgttgtgtatcagttacac
tccttaacaactctatttcttcggttcaatcgcatcaaagttgttggtgatgacatttgt
catttaacaaacctcaccatgctctcattacgagaaaacaaaatcaaagagctacctgct
gggattggtactctagtcaatcttgtaacatttgatgtatcgcataaccaccttgaacac
ttgcctgaagagattggcaaatgtatgatgttactcactcttgatttacaacataatgaa
ctactggacatcccagacagcattggagagctaagccagcttcagcgacttgggttgaga
tacaaccgtctaaatggtgttccgcagaccctcagcaattgcaagcatatggatgaattc
aatgtggagggaaatgccatctcagttctaccggaaggccttctttccagtctgtctgag
ttaacaacaatcacattgtcaagaaataattttactgcttacccatctggaggacctgca
cagtttactagtgttcaatcaatcaacttggagcataatcaaattgataaaattccgtat
ggcattttttctcgtgcaagaaatctcaccaagcttatcatgaaagaaaaccagctgacg
gccctacctttggacatgggaacatggttgaatatggttgaactaaatcttggaaccaat
cagctaacgaagctacctgaagatatacagaatttacagaacttggaagttttaattttg
tcaaacaatctcctgcgtagattacctgccagcattggaagtttgcgcaaactcagagtg
cttgatttagaagaaaacaagattgaaacattacctaatgagattggatatctgcgtgaa
ctgcagaagttggttgtacaatccaaccaagtctcaatcctaccccgagctattggccac
cttgtcaacttgacatacctaagtgttggtgagaacaatttaatccagttacctgaagag
ataggaagtttggagcagttggaacaattgtacataaatgacaatgctaatttgcacaat
cttccatttgaactagcattatgttccagccttcagatcatgagtattgaaaactgtccc
ctttcacaaattcctgccgacattgtcagtaaaggaccttcattagtgatacagtacctc
aaattgcaaggcccgtaccgtgccatgtga
DBGET
integrated database retrieval system
