Thrips palmi (melon thrips): 117641388
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Entry
117641388 CDS
T08251
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117641388
Membrane trafficking [BR:
tpal04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117641388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
Motif
Other DBs
NCBI-GeneID:
117641388
NCBI-ProteinID:
XP_034234553
UniProt:
A0A6P8Y4R9
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MDDNGSVQSLQWDMLDLADHLRQERLFVSSEQQHLQELNAKVVSVSSSLARMAWIMLQQR
TNLKHLILARPDCPPSVCCQRAIALEETQFIDGYKELPFQDCGEFMQTLRTSPHLLAACL
AAGDRLMPEAMPAVINTLYGGLFGSCLLPEDKLLVLRLLRHLTQLQLVPSDNPRRMLRHG
SCALARLYAVFHEGLFSAKIFLTAALHGPIMQLLMEDECFLDIDPDKAVVRFPPDERMKK
FGKEGTPEYSLRLQRYRSWTVSNLVVLVQRFVVSLRENMHCFPTSIRWLVRQISGMLSKS
GQLEPKEVFDICVDLIFSFLICPAIVDPEQHGITDAPVSYVARFNLIQVAQILQVLASRK
YQDVDPKVWDLYSQFDKDIVSSLVDGLLEGAINGLLEEPVISESCKLQGLSRSAALLTEA
ELYGLVNFLQTVQASTGPDSDATGQVSAGLFDEAGVDRKLLAALLAQLPPMAIATAASFQ
QPCVNGNVNTPSPSSSSVHGSSNSAKPNALSPQNIANGSSSSPDTPNRKASIIGKGVAVA
MSKTTKAIRSVAGSSDSPEESTATEGADDSIEVNKYSVLVIPFSPDMGQYVGLLPEQKVL
NIDCDAQKNLPTADGSTSHHSVGTSSTVRPAVVPPERSESLEKRTRFSLSHDEGSIGNTS
DNLEAVSEAASNHSVASSLELENEDQDQNDNLSDMVSANVSGRGTPNISGRDTPSSQITE
GDEGARNAAVEPRQNYDFPPPPPPTKQSRSDIDDKFGKFEIKKLLEGDETISLVSDTWST
DVLASDSELIEQSERERERYNAQHPPPLLPLSMPPPLAPLPGVLPGPLGAAQQNLIDLSE
TASEAWSTDVLASDSERMLEVDTDDTSSVARSDDTARSEVESRGEPEGGDDTPPLSSAGA
VFRPIRDDGRPASVSSLASSASGMVPPSPTRSDSVSSHPTWNVTGRGGGRADYRRRTLEY
IDNNARAQAAAISRPTPLPITHEETRIPPMGPIGRSQSVPVSPPLSVVSDPAVASPLLHP
VPSSTPLNPFSASTSSLIPVPTNSAPSSSSIKPPLLSGPAEVQALIDVDRVDEAEAASQV
ASHASTASLESSSSSGGGASGGASGSGGSSSADLKPPQPPPPALTSTPTPDLPAPAPVMA
NGSACGSAGAGAPLPLSLSLSLSRAAVATGAIPKSISFDKTAERGDKELLDDDQKHKRGF
FKHLKLTFKNRQRKTLNRSGDDMSRDEGGYGDGSHLRLRRGLSEDSKGTYSESSEDILAK
YRRKPSTGADSAASESSARVPASAASLSEREGEPEGSDERLFIDPNNVEASYAFKDAKRK
LRMVLSTADLQHVPWRSQFSHKADDPWLRKDNELIAFLRMQLAEAINLQDRALAAHLHET
LRCIKLFNNDGCHKLFNSLKEDYCQRTPYTAYLVRCRQGLLSTLAHLERMMERIKCERAV
CDRCVVSVCVRMFLERREVQVTDFTLEFQQLTLADEKTDLLENFLQTLATDMERDHFWSG
VSQEQLLQARTAIEQVIISRVYPYALYPNGEGDMSRDQVLHEHMKKLSAIITPNHKDIDI
AKMFHYECPWPSAQAEIAAISAYKTPHDKLQCVFRCATTIMNLLKMVQERNIPAADDLVP
VLVYVLIKANPLSLLSTVQYVNTFYGSRLEGEEHYWWTQFCSAIEYIKTLDYRD
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggatgataacggatccgtgcagtcccttcagtgggacatgctggacctggcagaccac
ctccgccaggaacgtttattcgtatcctctgagcaacaacatttgcaagagctgaatgcc
aaggttgtctctgtatcatcaagtttagctcgaatggcatggattatgctgcaacaaaga
acaaatttgaaacacttgatactggctagacctgattgcccaccatcagtgtgctgccaa
cgagccatcgctcttgaagaaacacagttcattgatggctacaaagaactgccctttcag
gattgcggtgaattcatgcaaacattgcgcacatcacctcaccttcttgctgcatgcctt
gctgctggtgacagactaatgcctgaggcaatgcctgcagttattaatacattgtatgga
ggcttgtttggatcatgtttgctaccagaagacaaacttttagttttgcgtctgctgcga
cacttgacacaactacagcttgtaccatctgataatcctaggaggatgttgagacatgga
tcttgtgctctggcaagactgtatgctgtcttccatgaaggtttattttctgcaaaaatc
tttcttactgcagctttgcatggcccaatcatgcagttacttatggaagatgagtgtttc
ctggacattgatcctgacaaagcggttgtgaggtttcctcctgatgaacgcatgaaaaag
tttggtaaagagggaacaccggagtactctctaagacttcaacgatatcgtagctggact
gtttcaaaccttgttgttttggtacaacgctttgttgtaagcttaagggaaaatatgcat
tgctttccaacatccataagatggcttgtgagacaaatatcaggcatgctttctaaatca
ggccagcttgagcctaaagaggtctttgatatttgtgtggatcttattttttcatttttg
atctgtcctgctatagttgatccagagcaacatggcattacagatgcacctgtcagttat
gttgcccgatttaacttaattcaggttgctcaaatattgcaagtactagcttccaggaaa
tatcaagatgttgatccaaaggtctgggatctttattctcagtttgataaagatatagta
tcatcacttgttgatgggcttctggagggagcaatcaatggtctgcttgaggagcctgtc
atctcagagagctgcaaattgcagggtctgtctcgttcagctgccctcctcacagaagca
gaactttatggcctggttaacttccttcaaactgttcaagcaagcacgggtcctgacagc
gatgctactggtcaagtatcagcaggattgtttgatgaagctggtgtggacagaaaattg
ttggctgcccttttagcgcaacttcctcccatggccattgcaactgcagcctcttttcaa
caaccgtgtgttaatggaaatgtgaatacaccatctccatctagcagttcggtccatggc
tcttctaattctgctaaacctaacgccctatctcctcaaaacattgcaaatggaagtagt
tcttcaccagacacaccaaataggaaagccagcattattggtaaaggagttgctgttgct
atgagcaaaacaaccaaagcaatacgtagtgtggcaggatctagtgacagtcctgaggaa
agtactgccacagagggtgcggacgactcaatagaagttaataagtatagtgttttggtt
atcccgttttctcctgatatgggacagtatgttggtttgttgccagaacaaaaggtactc
aacatagattgtgacgctcagaaaaacttacctactgctgatggttctaccagccatcac
agtgtgggcacttcatctactgttcgccctgctgtggttccaccagaacgctctgaaagc
cttgaaaaacgtactagattttctctttcacacgatgagggctctataggtaatacaagt
gataatcttgaagcagtttctgaggctgcatccaaccacagtgttgcatcatctcttgaa
cttgaaaatgaagatcaagatcaaaacgacaatctttcagacatggtttctgctaatgta
tcgggaagagggactcctaacatttccgggcgtgacacaccctcttctcaaatcactgag
ggtgatgaaggagcaaggaatgctgcagtggaacctcgccagaactatgatttccctcca
cctccaccacctaccaaacaaagccgctcggacattgatgacaagtttggcaaatttgaa
ataaagaagctccttgaaggggatgaaacaatatcactggtgagtgacacatggagcact
gacgtcttggctagtgacagtgaactcattgagcaaagcgagcgtgagcgtgagcgctac
aatgcgcaacaccctccaccattgctgccactctctatgcctccacctttagcacctctt
cctggggtgttgcctggcccgcttggagcagctcagcaaaatctgattgatttgtcagag
acagcctcagaagcatggagcactgatgttcttgcatctgattcagagcgtatgctggaa
gttgatactgatgacacaagtagtgtagcaaggtctgatgataccgcaagatctgaagta
gagagtcgtggggaacctgaaggaggagatgacacaccaccattgagttctgctggtgca
gtatttcgacctattcgagatgatggccgccctgcaagtgtgtcaagtttggcgagctct
gctagtggcatggttcccccgtcaccaactagaagtgattcagtttcctcacaccctact
tggaatgtgactggacgaggaggaggtcgggccgactatcgcaggagaaccttggagtat
attgacaataatgcacgagctcaggctgcagcaatcagtcgaccaactccacttccaatt
acccatgaagaaacgcgcattccaccaatgggccccattggtcgcagccagagtgttcca
gtgtcgccaccattatcagttgtcagtgaccctgcagtcgcttctcctctgcttcaccct
gtaccctcctctactcctctgaaccccttttcagcctccacctcctccctaattcctgtt
ccaaccaactccgcgccttcatcttcatccattaagccgcctctgctttctggacctgct
gaggtgcaggctctgatagacgttgacagggtggacgaggcggaggcagcctcgcaggtg
gccagccacgccagcacggccagcctcgagtcgtccagcagcagtggcggaggggcgagt
ggaggcgccagcggcagcggcggcagcagcagcgccgacctgaagcctccgcaaccgcct
ccacccgcactcacttccacgccgacgccggacctgcccgcccccgcccccgtcatggcc
aacggcagtgcgtgcggcagtgcgggggctggcgcgccactgcccctgtcgctgtccttg
tccttgtctcgcgcggcagtcgccacgggggccattcccaagagcatcagtttcgacaag
acagctgaaaggggcgacaaggagcttctggatgacgatcaaaagcacaaacgaggtttc
ttcaaacacctgaaattaacattcaaaaatcgacaaagaaaaactctgaatcgatcaggt
gatgacatgagtcgtgatgaagggggctacggcgacggttctcacttgcgtctaaggcgc
gggctctccgaagattctaagggaacttattctgagtcatccgaggatattctggccaaa
tatcgtcgaaagcccagcacgggtgcggactcggcggcctcagaatcgtctgccagagtg
ccagcctctgctgccagtctctcagaacgtgagggcgaaccagaaggaagtgacgagcgg
ctgtttattgatcccaacaatgtggaagcatcgtatgccttcaaggatgccaagcggaaa
cttcgcatggtattgagcactgcggatctccagcatgtcccatggcgctctcaattttct
cacaaagctgatgatccttggttgagaaaagacaatgaattaatagcttttttgagaatg
caacttgctgaggcaattaatttacaagatcgtgctctagctgcacatttacatgaaact
ttacgctgcatcaaactcttcaacaatgacgggtgtcacaagctttttaattcattgaaa
gaagattattgccagagaactccctacactgcatacctcgtgagatgtcgtcagggcttg
ttatccacacttgctcacttagaaagaatgatggaacgcattaaatgtgaaagagcagtg
tgtgatagatgtgttgtctcagtgtgcgtgcgcatgtttttggaacgaagagaagtgcag
gttactgatttcacccttgaatttcagcagctcactcttgctgatgaaaaaactgatttg
ttggaaaacttcttgcaaactcttgccactgatatggaaagggaccatttctggtcaggt
gtgagtcaagagcaattgctccaggctcgtacagccatcgagcaggtcattatcagtaga
gtttatccatatgccttgtatccaaatggcgagggtgacatgtcacgtgaccaagttctc
catgagcacatgaaaaaattatcagcaataattacgccaaatcataaagacattgacatt
gctaagatgttccattatgagtgcccatggccttcagcacaggcagaaatagctgctata
tctgcatataaaacacctcatgataaattgcagtgtgtgttccgatgtgccacaactatc
atgaatttgctaaagatggttcaggaacgaaatattcctgctgcagatgatcttgttcct
gttctggtgtatgtccttattaaggccaatcccttgtcacttctttctaccgttcaatat
gtgaacacattttatggcagccgattggagggagaagagcattattggtggacgcagttc
tgttcagctattgagtacattaaaaccttagattacagggattga
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integrated database retrieval system
