Thrips palmi (melon thrips): 117641411
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Entry
117641411 CDS
T08251
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117641411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117641411
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117641411
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117641411
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
117641411
NCBI-ProteinID:
XP_034234593
UniProt:
A0A6P8Y4V4
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MQDIKIRLASERVNHSLTFGEKGAPQLFTPGQTITDNQRVMSGHGTYLDEDNKDVLKASV
AGTVERVNQLICVRPIKCRYMGEIGDVVVGRITEVQQKRWKVETNSRLDSVLLISSVNLP
GGELRRRSAEDEQMMRKYLQEGDLVSAEVQSVFSDGSLSLHTRSLKYGKLSQGVLVKVPP
SLILRRKNHFHNLLCGASVILGNNGLIWIYPTSPEDESGVGGFTQNLEEVIDTEDRERIA
RLRNCILALAASKLMLFDSSIQYAFEESLSYSIKELLTPETMVDVALHTRHRLQSYKDD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatcaaaattagactcgcgtccgagcgagtgaatcattcgctgacattcggt
gaaaagggagcccctcagctgtttacaccgggccagaccataacagacaaccaacgtgtt
atgagtggccatggtacctacttggatgaagacaacaaggatgtcctgaaggcttctgtc
gctggcactgtggaacgagtaaaccagctcatctgtgtgcgacccatcaagtgccgttat
atgggtgaaataggggatgttgtcgttggaagaataacggaggttcagcagaagcgttgg
aaagtagaaacaaattctcgacttgattcagtcttactgatttcatctgttaacttgcct
ggtggtgaattgagaaggagatcagcagaagatgaacagatgatgcggaagtatcttcaa
gaaggtgacctagtcagtgcagaagtgcaaagtgtgttttctgatggttctctttcttta
catactcgcagtttaaaatatggaaagctgtctcaaggcgttcttgtgaaagtgccacct
tctcttatactgaggaggaaaaatcactttcacaatttgttgtgtggtgcaagtgtaatt
cttggaaacaatggactaatttggatctatcctactagtccggaagatgaaagtggagtt
ggtggttttacacaaaatttagaggaggttattgacacagaagaccgtgaaagaatagcc
cgtttaagaaactgtatactagcccttgctgcaagtaaattgatgttgtttgattcctcc
attcaatatgcctttgaggaatccctcagctactccatcaaggagttattaactcctgaa
accatggtagatgttgctttgcacacaagacacaggcttcagtcctataaagatgattaa
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