Thrips palmi (melon thrips): 117641575
Help
Entry
117641575 CDS
T08251
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117641575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117641575
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117641575
mRNA cycle factors
Common to processing body (P body) and stress granule
117641575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
zf-AD
TPR_2
TPR_8
Motif
Other DBs
NCBI-GeneID:
117641575
NCBI-ProteinID:
XP_034234923
UniProt:
A0A6P8YDH2
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MGLNDAVQALKKADVLKEKVNNCRELLNDGDAWVWQQQLQRIYQQVLLQDLEYALDCKVE
QELWNYGFKNYIGILQNMVKDKKNPRRTESQAMLSWCLEAASGFYLTLLQEICAAFDLDL
SCRRRDSVYGISDNYNNVPNRLIQPNTTSCSYICQHCLVHLGDIARYRNQNRQAESFYRH
AVQLSPHSGQPYNQLALLDSSRGDRLGTVFHYVKSVSVKHPFPAAATNLKRMFSRFAEDQ
LNLDGRSKLTVQEYVALFLKFHGMLYLNADLTACSRTIRLLTDTLTAQVATESFTSRKLV
QMLAVNLYALHRARGNIFPAENERHWDQRDDLAPKLSPDEIQAKSLLLDLIAGSLSALLL
PVYTIRENEALLEYFALPAIKLTLDWIRLEPHVLNNQAFSSRLQIWPSLCKLLNGLQPLL
NASDQSNKVSSIPLPEDRELHGFLPLTKAMQELTFHCEDSKIDTPEINRFRASRLVQFGV
WLSKQEENAVISSREMHDKSREGLASIRSFEALASGQAPSSELIRELEQLSLGVGQCPQQ
PSPSPSDAGSWGGSSTSTPGGAVSPPPVPPVIVEQLTKVPEKRTGILKPQGSLEKSREKE
FGESEDSGLTVGTGRRGPRQNIAMQTILRKGVTLAPEADVKQVSFKTPSPTALDRNDGWT
SQKSVQSQPNLPSSPLLSPTASASFSQPPPPLQQLQQQAQARVVHVPPPPIFPLPPMSVP
PPSIRQNMLDASGHNFVISENAMQMRPPFGAWQEEALMPNLVSDSNLRNSWWPEHDQGPS
QSRSQTRNLPVNMYNGAVNWGPMPPNQPQPQYQRPPPHVQQPLSNGIQQPHHPSLNLHNS
TVQHQLFQPHSGSIPRQQEPQLHQGTQGSSIMFQNQQSHRTLSEDKCGDSPSNIQGFSPY
SLFSTNNWLSPAISPGRSGVDSESRDGVNSIRDNPDPNGGNGAAIMGAQSLWSGPGPSPL
ERLLEQQKQFREGPSPSPKSGT
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaatgatgcagttcaagcactgaaaaaagcagatgttctaaaagagaaagtt
aataattgtcgagaattgctgaacgatggagatgcttgggtttggcaacaacagttgcaa
cgtatttatcaacaagttctcttacaagatttggaatatgcccttgattgcaaagtggaa
caggaattatggaactatgggttcaaaaactacattggcattcttcagaatatggtgaaa
gacaaaaagaatcccaggagaactgaatcacaagcaatgttatcatggtgtcttgaagca
gctagtggcttttacctgacattgctgcaggaaatttgtgcagcttttgatctggatcta
tcttgccgcaggagagattcagtctatggaattagtgataactacaacaatgttcctaac
aggctcatacagcctaatacaacttcgtgttcctacatttgtcagcattgtctagttcac
cttggagacattgctcgatatcgcaaccagaatcgtcaggcagaatcattttacaggcat
gctgttcagctttcccctcattcaggccaaccatacaatcagttggctctcttagattcc
agtagaggagaccgtcttgggacagtttttcactatgtcaaaagtgtatcagtgaaacac
ccttttcctgcagctgcaacaaatttaaagcgaatgtttagtaggtttgctgaagatcag
ttgaacttggatggacgtagcaagttaacagttcaagaatatgttgccttgtttctcaaa
tttcatgggatgctgtatcttaatgcagatctcacagcctgcagtcgtactattcgtctc
ttgactgacacactgacagcgcaggtggcaaccgaaagctttacatctagaaagctagtt
cagatgttggctgtcaatttatatgccttgcatcgtgctcggggtaacattttccctgct
gaaaatgaaaggcattgggaccagagagatgatcttgctcccaaattgtcacctgatgag
atacaggccaaaagcctccttttagatctcatagcaggttccctgtctgctcttttattg
ccagtatacactatcagagagaatgaggctcttcttgaatattttgctcttcctgcaatt
aaacttactctggactggattcgtctcgagcctcatgtacttaataatcaagctttctca
tcccggttgcaaatctggccaagtttgtgcaagttactaaatggcttacagcctcttctc
aatgcttcagatcagtcaaacaaagtttcatcaatccctctcccagaggacagagaactt
catggctttttgccactcactaaagctatgcaagagttaacgttccattgcgaagactcc
aaaattgatacacctgaaataaaccgcttccgtgcctcaagacttgttcaatttggtgtt
tggttatccaagcaagaagaaaatgcagttatatcatccagagaaatgcatgacaagagc
agagaaggcctggccagtattcggtcttttgaggctttagcaagtggccaagccccgtca
agtgagctgattcgagaactagaacaattaagtcttggagttggacagtgtcctcagcaa
ccatcgccatcgccctccgatgcaggcagttggggtggtagcagcacatcaacacctggg
ggtgctgtgagtcctccccctgtaccacctgtgatagtagaacaacttacaaaagtgcca
gaaaagagaacaggcatactaaagccacaagggtctcttgagaaatctagagaaaaagaa
tttggtgaatccgaggacagtgggcttacagtaggtactggtcgcagaggtcctcgtcag
aacattgccatgcaaaccattctgcgtaaaggagtgactttggctccagaggctgatgtg
aagcaggtttcttttaaaactccatctccaaccgctctggatcgaaacgatggatggaca
agccaaaagtccgtccagtcacaacctaacttaccatcctcgcctttactttcacccact
gcttctgcatcgttttctcaaccaccgcctcctctgcaacagttgcagcaacaggcccaa
gcgagagttgtacacgtacccccaccaccaatattccctcttcctccaatgtcagttcca
cctccaagcattcgccaaaatatgcttgatgctagtggccataattttgttatttctgaa
aatgctatgcaaatgcgtccaccttttggtgcatggcaagaagaggcactaatgccaaat
ctagtgtcagatagcaacctcagaaattcttggtggcctgaacatgaccaggggccatcc
caaagccgctcccaaacaaggaacctccctgtaaacatgtacaatggtgctgtgaactgg
ggacccatgcctccaaatcaaccacaacctcaataccagcgacctcccccacatgtccag
cagccattgagtaatggaattcagcaaccacaccacccttccttgaatttgcacaattca
acagtgcagcatcaacttttccaacctcattctggttctattcctaggcaacaggagcct
caattacatcagggtacccaggggtcatcaataatgttccaaaatcagcaatcacatagg
actctctcagaagataaatgtggagattctcccagtaatattcaaggtttctctccatac
tccctttttagtaccaataactggctatctccagcaatatcaccaggacggagtggagtg
gattcagaatccagggatggtgtgaactctatcagggacaaccctgacccaaatggaggc
aatggagcagccataatgggagcacagtccctgtggtctggtccaggaccatcccctctt
gagagactgctagaacaacaaaagcagtttcgagagggtccctctccatcacctaagagt
gggacatga
DBGET
integrated database retrieval system
