Thrips palmi (melon thrips): 117641634
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Entry
117641634 CDS
T08251
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117641634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117641634
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117641634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117641634
NCBI-ProteinID:
XP_034235014
UniProt:
A0A6P8ZJA5
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MLSGVSPGISMAPPNTQLSLGMDSMALADHTRFNGLMAHPGVAIPNGTAHSAAHSGLVPA
VPAASIVPVQANGHAGHAARMQIKMDTSPVQMNGANGNAQAQAAAAAAAAGVPVGVPVGV
PVNNGSTSPGRVSPSAADPAPGKLFVGGLSWQTSAERLKEYFGMFGTVTDVLIMKDPMTQ
RNRGFGFITFQDAETVEKVLKVPVHTLDGKKIDPKHATPKNRGRVANRTKKIFVGGVSQD
TTTEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFEQEDVVDRVCEIHFHTIKNKKV
ECKKAQPKESVAAANLGVNGLLLSKRMLMRVGPTAAPAAATQLAAVQAQAAAHAQVAATQ
LAAQAQAQAGYGKLFGAYPLASYRYSPYPLQAVPSATPAPAQTPTAVPPVPAPANPYQGY
SLTNVDMSSFQGVDWSSMYGMGMYV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtggtgtttcccctgggatatcaatggcacctccaaacactcaactcagtttg
ggtatggatagcatggcgctggctgaccatactcgcttcaacggcctcatggcccacccc
ggcgtggcgatccccaacggaacggcgcactccgccgcccacagtgggctggtgcccgcc
gtccccgccgcctccatcgtgcccgtgcaggccaacgggcacgcgggccacgccgcgcgc
atgcagatcaagatggacacgagccccgttcagatgaacggcgccaacggcaacgcgcag
gcccaagccgccgcggccgcggccgccgccggcgttcccgtcggcgtcccggtcggcgtg
cccgtcaacaacggcagcacgtcacccggcagggtgtcgccgtcggccgcggaccccgcc
cccggcaagctgtttgtcggcggcctcagttggcagacgtcggccgagaggctcaaggag
tacttcggcatgttcggcaccgtcaccgacgtgctcatcatgaaggaccccatgacacag
aggaatcggggctttggctttatcaccttccaggacgccgagacggtggagaaggtcctt
aaagtgccagtccacaccctcgacggcaagaagatcgaccccaagcacgcgactccaaag
aacagagggcgcgtcgcgaaccgaaccaagaagatcttcgtcggcggcgtgagccaggac
accaccacagaggaagtgaaggcgtacttcaaccagttcggcaaggtcgaggagacagtg
atgctgatggaccagcagacgaagcgccaccgtggctttggcttcgtgacgtttgagcag
gaggatgtggtggaccgagtgtgtgagatccacttccacaccatcaagaacaagaaggtg
gagtgtaagaaggcgcaacccaaggagtcggtggccgccgccaacctgggcgtcaacggg
ctgctcctgagcaaacgcatgctgatgcgggtaggccccacagcggcgcccgccgccgcc
acgcagctcgccgccgtgcaggcgcaagccgcggcccacgcccaggtggccgccacgcag
ctggccgcgcaggcccaggcgcaggcaggctacggcaagctgtttggcgcgtaccccctg
gcatcgtaccggtactccccctacccactgcaggccgtgccatcggccacccccgccccc
gctcagacccccacggcggtgccccccgtacccgcccctgccaacccctatcagggctac
tcactcaccaacgtggacatgtccagctttcagggggtagactggagctcaatgtacggc
atgggtatgtatgtgtag
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