Thrips palmi (melon thrips): 117641769
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Entry
117641769 CDS
T08251
Name
(RefSeq) ATP-dependent helicase brm-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117641769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpal03021
]
117641769
03036 Chromosome and associated proteins [BR:
tpal03036
]
117641769
Transcription machinery [BR:
tpal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117641769
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117641769
Chromatin remodeling factors
BAF complex
117641769
PBAF complex
117641769
GBAF(ncBAF) complex
117641769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
DEAD
QLQ
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
117641769
NCBI-ProteinID:
XP_034235261
UniProt:
A0A6P8YFK1
LinkDB
All DBs
Position
Unknown
AA seq
2495 aa
AA seq
DB search
MASPSPQSSPMPPPQTPSPMGPPQQSPSPMPSPSGMVPPSHSPSPMGPPSHHHPHSPGPT
GYPPHPGHPGHPGQHAGPGHPGAPGHPGQHQGPPSHHVHHGHPSQGPPGHPGHPGHPSHQ
GHPGHPGHHNQHSGPSHPSQSHPSQAGHPGPGHPGHPGQPHPGQGHPSQGHPSQGHPSQG
HPGPGHPGQGHPGQGHPGQGHPGQGHPGQGHPGQGHPGQGHPGQGHPGQGHPGPGHPSQG
HPGSHSAPTHGGHPGPGHPGSGHPGPGHPSSGHPASGHPGSGHPGAGHPSPGHPGSGHPG
SGHPGPGHPGASHPGSSHPGSGHPGAGHPGSGHPGGPGHPSSGHPGGPGHNPPGHPGSGH
PGSGGHPLHPGQGHPGQAHPSQGHPGQSPSHPSHPSHMGQGHPGQHPGQHPGQHPGQHPG
QHPGQHPGQHPGQHPGQHPGQHPGHPISHQSHPGSGHQPPSHPAPSHTPSGHPPSSPHSA
GPPGPHTPGHSAPPPHSAQSPGQPSGHPGHGPPPGMHMNGPSGNIGLGQGFQHGMANPGP
PQGCGQENLTALQRSVDSMEDKGMAEDPRYSQMMMRGRPPMQGFGGSQQSEMPQKYQFTP
TQMNMLRFQIISYRSMARNLLPPHARLGASGKPIEGAPPSTQSPTPPSFQQPPSGPGASP
GPGSGPGSSGPPGGPPPSGAAQVPPQSGPSPHQGPPTPGPQQPPPGPAGPGPLTPATSQP
PSTPSTPGAPGSPTPAGAVPPPAPSTPGAPSGPPSGPPTPGPAMPPHGAPSPRPQGMPPG
GPPTPGPAGTPPPQGPPPGHPGPPSGPPSGPPSGPPSGPPSGPPTPGPPTGPPSGPPTGM
HGLPHGSPHSGPHGGPHGPPHGPPHGQPHGPPHGPPHGPPHGPPHAGPHGGPHGGPHSGP
HGPPHGPPHGPPHGGSPHGPPHGPPHGAPPHGVPPHGAPPHGAPPHGAPPHGIPPHGGPP
HGGPPHGGPPHGGPSHGVPPHGGPPHGGPPHGAPHGPSHGGPPTGPPGPPTAAPGSAPPS
QGPAGQGQPGGAATPPLSGPPGPPGPQGPPQGPPGPHGPAGGPPTPGSQGPAGPPGPHGM
PSGPQQGPPGPPGPPGPPGMQQRPGPTPPPGGPPHQVRSYTNGQMMPQGPQPGGPPSAQG
PHGPHGPHGPMHPGGPMGYPPHPGAMGQHPGGPMGPHPGQHGGPMGPHPGGPMGPHPGHP
GHPGHPGHPGHPGAMVGMGQHGPMQHPGGPMHPGMSPMGPMGPMGPMGPMGMQSRAMHQG
PIGPGMPPHPQMHQGGLPPGAHQIQQQVLSTTSSIMGKNARTTTMPKPSGIDPLATLDER
ERKVAENIQSRIEILSNLPPNLSEEDKLQAQIELRALRVLNLQRQLRSDIVAHTRAMTTL
ETAHNIKLYKRTKRQGLREARATEKLEKQLKIEAERKRRQRHKEYLDTVLQHSKDLKEFH
RNNLGRIGRLNKAIMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRL
AFLLSQTDEYIGNLTEMVKQHKLEQKLKQRDSQKKRRRRKKKPVEGEGGQEGQEGNEEEE
DEEDYRVTVREVATGKEISGDDAPMASEVDAWLEKNPGWECVEEYTDDEEEETEGGEKKE
KEGEEGEKGALQKNTKVEDDEYGKKGEEHTYYSIAHTIHEHVTEQADILINGKLKEYQVK
GLEWLVSLFNNNLNGILADEMGLGKTIQTIALITYLMEKKKVNGPFLIIVPLSTLSNWVL
EFEKWAPSVICLAYKGSPQARRSLQAQMRNSKFNVLMTTYEYVIKDKATLAKIHWKYMII
DEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFE
QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDM
SGLQRVLYRHMQSKGVLLTDGTERGKQGKGGAKALMNTIVQLRKLCNHPFMFQQIEEKYS
EHTGTAVTGPELYRTSGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLTWRNFSY
LRLDGTTKAEDRGDLLKKFNSPTSEYFLFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQD
LQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER
QQFLQTILHQDDADDEEENEVPDDEVVNQMLARSESEFEAFQKMDLDRRREDAAKGSGRK
SRLVDESELPEWLLKGEEELERLAYEEEEAEQCLGRGTRQRKEVDYTDSLTEREWFKAMD
DLGDFDDEEEEEEEDRRPASKKGRKKRKKDDDDEDEPLSIKKRRGAAEKSTLDPKVKKQM
KKIMTIVVKYTDSEEGRVLSEPFMKLPSRKALPDYYEVIKKPMDINRILTRISESKYFEM
DDLEKDFMQLCKNAQLYNKEQSLIHEDSIVLQSVFTNARQQVQQDQEQESDKDDEESEQE
SKPRSKRGGRPPKVEKGRRKRSRKYVSSDEEEEDD
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccttcaccgcaatcctctcccatgcccccgccacagactccatctccgatg
gggccaccacaacagtcgccatcccctatgccatcaccttctgggatggttccaccatca
cattctccttcaccaatggggcctccatctcaccaccacccacacagcccaggccccaca
ggctatccacctcacccagggcacccagggcaccctggacagcatgcagggcctggccac
cctggggcgcctggtcacccgggacagcaccaagggcctccttcgcatcatgtccatcat
ggacatccttcgcaaggaccccctgggcaccctggccaccctggccacccaagccatcaa
ggacatcctggacaccctggccaccataatcaacattcagggccaagtcaccccagccaa
agtcatccttctcaggcaggacatcccggcccgggccaccctggccaccctggccaacca
catccaggacagggacaccccagtcaaggacaccccagtcaaggacaccccagtcaaggc
catcctggtccaggacatcctggacaaggacatccggggcaaggacaccccggacaagga
caccccggacaaggacaccctggacaaggacacccaggacaaggacatccggggcaaggc
catccaggtcaaggacatccagggcaaggacatccaggacctggacaccccagtcagggg
catcccggcagccactctgcaccgactcacggcggccaccctgggccaggacatcctggt
tccggccatcccgggcctgggcatccatcatctggccatcccgcttccggacatcctgga
tctggacacccaggagctggccacccctcaccgggccaccctggctcagggcacccaggc
tctgggcatcctggacccggacaccctggagcatcgcatcctggatcaagtcatcctggc
tcaggccaccctggtgctggccacccgggttcaggacatccaggaggccccggccatccg
tcgtcaggacatccaggcggacctggacacaatcctcccggacaccctggatcaggacat
cccggatctggcggccaccctcttcatcctggtcagggacatcctgggcaagctcaccca
agccagggtcatcctggacagagtccttcccaccctagccacccaagtcacatggggcag
gggcacccagggcagcaccccggccagcatcctggtcagcaccctggccaacatcctggc
caacaccccggccaacatcctggccaacacccaggccaacaccctggccagcatcctggt
caacacccaggacatcctattagccatcagagtcaccctggctctggccatcaaccccca
tcccacccagccccaagccatactccttcaggtcaccctccatcttcaccacacagtgct
ggccctccgggacctcatacacctggccactcggcacctccacctcattcggctcaaagt
cctggacagccctcaggccaccctgggcacggcccacctccaggaatgcacatgaatggg
ccttcgggcaacattggactcggccaaggattccagcatggcatggcgaatccgggtcct
ccccagggctgtggccaggaaaacctgactgccctgcagcggagcgtggactccatggaa
gacaagggtatggcggaagaccctcgatattctcagatgatgatgcgcgggcgtcccccc
atgcagggcttcggtggctctcaacagagtgagatgcctcaaaagtaccagttcacaccg
acacaaatgaacatgctgcggttccaaatcatatcataccgtagcatggcaaggaacctg
cttcccccgcatgctcgactgggtgcaagcggcaagccaatcgaaggagcacccccttca
actcagagcccaactccaccaagcttccaacaacctccaagtggcccaggtgcttctccg
ggaccgggcagcggacccggatcttctggcccgccagggggaccgcccccatctggagca
gcacaagtccctcctcagtcgggaccttcacctcaccagggccctccgactccaggaccc
caacagcctccaccaggcccagcagggcctggaccacttactcctgcaacgagccagccc
ccatccactccaagcactccaggagcaccaggttcgccgacaccagctggtgccgttcca
ccgcctgctcctagcacgcctggagcgccgtctggacctccgtctgggcctccgacgcca
ggcccggcaatgccaccacacggcgcgccgtctccgcgaccccaaggaatgccccctgga
ggacctccaacacccgggcccgctggcacgcctccgccgcaaggaccaccgcccggccac
ccaggacctccaagcggcccaccctcaggcccaccatctggccctccatcaggccctcca
agcgggccgcccaccccgggcccaccaacggggcccccaagtggccctccgaccggtatg
catggccttccccatgggagtcctcacagtggacctcatggcgggcctcatggcccacct
catggcccaccacatggtcaaccccacggcccgccacacggaccgccgcacggaccacct
cacggcccacctcacgcaggtcctcatggaggaccgcacggtggcccacacagtggtcct
catggtccaccccacggtccaccccacggtcctcctcatggcggctcgcctcatggaccg
ccccacggtcctcctcatggcgctcctccgcacggcgtacctccacatggtgcacctcct
catggcgctcctccacacggcgctcctccacatggcattcctccacatggtggacctccc
catggtgggcctccccatggcggacctccccatggcggaccatctcacggcgttcctcct
catggcgggcctccccatggagggccgcctcatggtgctccccacggtccttcgcatggt
gggccacctactggtcccccggggccacccaccgcagctccgggatctgcccctccatct
caaggccctgcaggacagggacaacctggcggcgctgcaacacctcccttgtcgggccca
cccggccctccagggcctcaaggtcctccgcaaggaccgcctggacctcacggaccggcc
ggtggaccacccacgcctggctctcaaggcccagcgggtccaccaggccctcatggaatg
ccctcagggccacaacaaggtccgccaggccctcctggtcctccgggaccgccagggatg
caacagcgtcccggtcctactccaccacctggaggccctcctcaccaggtgaggtcctac
accaatggtcagatgatgcctcagggtccacagccaggtggtcctccgtctgcacaaggc
cctcacggtcctcacggcccccatggccccatgcatccaggtggccccatgggctacccg
ccacatcccggcgccatgggccaacacccgggcggtcctatgggaccgcacccaggccag
cacggtgggcctatgggacctcatcctggtggtccaatgggtccgcatccaggccatcca
gggcatcctggacaccctggacatcctggacatcctggtgccatggttggaatgggacaa
catggccccatgcagcatcctggcggcccgatgcacccgggcatgtctccgatgggaccc
atgggtccgatgggcccaatgggtccaatgggcatgcagagcagagccatgcaccagggc
ccgatcggtccaggcatgcctcctcacccccaaatgcatcaaggcggtctgcccccagga
gcgcaccaaatccagcaacaggtgctgagcaccacttccagcatcatgggaaagaatgcc
cgcactacgaccatgcccaaacccagtggaatagatccgctcgcaacattggatgagcgt
gaaaggaaggtggcagaaaatattcaatccagaattgaaattctaagcaatctgccccct
aatctttctgaagaggataaactgcaggctcagattgagttgagagctttgcgtgttctc
aacctgcagcgtcagctgagaagtgatattgttgcacacacccgtgcaatgacaactctt
gaaacagctcataatatcaaactttacaagcgaacgaaacgccaaggattgcgtgaagca
cgtgctactgaaaaattggagaagcaactcaagatcgaagctgagaggaagcgcagacag
aggcataaggaataccttgacacagtcttgcaacacagcaaggaccttaaagaattccat
cgcaacaaccttggtcgtattggccgtctgaacaaagctattatgaattaccacgccaat
gccgaaagggaacaaaagaaggagcaagaaagaattgaaaaagagcgtatgcgccgtctt
atggctgaagatgaagaaggttacagaaagcttatcgatcaaaagaaagacaagcgtttg
gcattcttgctttctcaaactgatgagtacattggaaatttgactgaaatggtgaagcag
cataaattagagcagaagctcaagcagcgagacagtcaaaagaaacgcagacggaggaag
aagaagccagtggaaggtgaaggtggtcaagaggggcaagaaggcaatgaagaggaggaa
gatgaggaagactaccgcgtaaccgtcagagaggtagccactggtaaagagatttctggt
gacgatgccccaatggccagtgaagtagatgcgtggttagaaaagaatccaggatgggag
tgtgttgaagagtacactgatgatgaggaagaagaaacagagggaggcgagaagaaagaa
aaagagggtgaagaaggtgagaaaggagctcttcagaagaacaccaaggtggaagatgat
gaatatggaaagaaaggagaagagcacacatattacagcattgcccatactattcatgag
catgtcacagagcaagctgatattcttatcaatggtaaactcaaagagtaccaggtcaag
ggtctggaatggctggtgtccttgttcaataataatctgaatggtatcttggcagatgag
atgggtttgggtaagaccattcagacaattgcccttattacttatctgatggagaaaaag
aaagtaaatggacctttcttaatcattgtcccactttctactttgtccaattgggttttg
gagtttgaaaaatgggctccctctgtcatttgcctagcttataagggttctccacaagcc
cggcgatcattacaagctcagatgagaaatagcaaatttaatgtgcttatgacaacctat
gaatatgttatcaaggacaaagcaactctagctaaaattcattggaagtacatgatcatc
gatgaaggccatcgtatgaagaaccaccactgtaaactgactcaggttttgaatactcat
tacattgcacctcatcgcctgcttttgacaggaacccctttgcaaaacaaattgccagaa
ttgtgggctttgttgaatttcctcctgccatcaatcttcaaatctgtcagtacattcgag
cagtggttcaatgcaccatttgcaacaactggtgagaaggtagaattgaatgaagaagaa
acaatccttattattcgccgtcttcacaaagttttgagacctttcttattgcgtcgtctc
aagaaggaagtagagtctcaattgcctgataaggtagaatacatcattaagtgtgacatg
tctggtcttcaacgtgtgctctacagacacatgcagagcaagggagtgctcctcactgac
ggtactgaacgtggaaagcaaggaaagggtggtgctaaggctttaatgaacacgattgtg
cagttacgtaagttatgtaatcatccattcatgttccaacaaattgaggagaaatacagt
gagcacacaggcacagctgtcacaggcccagaactctatagaacttcaggcaaatttgag
cttctggatcgtattcttcccaaattgaaggccacaaaccacagagtgcttcttttctgt
caaatgacacaactcatgacaatcatggaagattaccttacctggagaaatttcagttac
cttcgacttgatggtacaactaaagcagaggatcgtggtgatctccttaagaaatttaac
agccctacatcagaatacttccttttcttgctgagtactcgtgctggtggtcttggtttg
aatttacaagctgcagacacagttgttatattcgattctgattggaaccctcatcaagat
ttgcaagcccaggatcgagctcatcgtattggtcagcagaatgaagtgagggttttgaga
ctcatgactgtcaactctgtagaggagagaattttagctgctgctcgatacaagctgaat
atggatgagaaagttattcaagctggtatgtttgaccaaaaatcaactggttctgaaaga
cagcagttcctgcaaaccattctgcaccaggatgatgctgatgatgaggaagagaatgag
gttccggatgatgaagtggtcaaccaaatgttggctcgctcagagagtgagtttgaagcc
ttccagaagatggacttggatagacgtcgtgaggatgcagccaagggttcgggccgcaag
tcacgacttgtggatgaaagtgaactccctgagtggctcctaaagggagaggaagagctg
gaacgcctggcctatgaggaagaggaagcagagcagtgtctaggtcgtggcactaggcag
aggaaagaggttgattacactgatagtcttactgaaagagaatggtttaaggcaatggat
gatcttggtgacttcgacgatgaggaggaagaagaggaagaagataggcgcccagcttcc
aaaaagggccgtaagaagagaaagaaagatgatgatgatgaagacgagcccttgtccatc
aagaagaggagaggtgctgctgagaaaagcacacttgacccaaaagtgaagaaacagatg
aagaaaatcatgacaattgttgtgaagtacactgatagtgaggaaggaagagttcttagt
gaaccattcatgaagcttccttcccgtaaggctcttcctgattactatgaagtcatcaaa
aagcctatggatattaacagaattttgacccgtattagtgaatctaaatactttgaaatg
gacgatcttgaaaaagactttatgcaactctgtaaaaacgctcagttgtacaacaaagag
caatctctcatacatgaagactcaattgtacttcagtcagtcttcactaatgctcgtcaa
caagtgcagcaagatcaggagcaagaatctgataaagatgatgaggagtctgaacaagaa
tcaaagccgaggagtaagcgtggtggccgacctccgaaggtagagaaagggagacgcaaa
cgttctaggaaatatgtcagtagtgatgaagaggaggaagatgattga
DBGET
integrated database retrieval system
