Thrips palmi (melon thrips): 117641799
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Entry
117641799 CDS
T08251
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04140
Autophagy - animal
tpal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117641799
04148 Efferocytosis
117641799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117641799
Membrane trafficking [BR:
tpal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117641799
Hops complex
117641799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
NP_C_Orthomyx
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
117641799
NCBI-ProteinID:
XP_034235328
UniProt:
A0A6P8Y6R6
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MPILLTADWCPVGRDEYYRKFEVYNMEWTNSFNMENVIVASCSYGGPLAVRRDPKKIVKV
QGSGKPTIYIYTAAGELVSSIVLSRPVIHVGWSIADDLLCIEDDGSVLRYDLFGNHQHTF
SVCEEAKITKVIEANVFNSSVGGTGVAILTSSYRFFLVNNVKDPKTHPMPEIPGLNAPPS
SWAVIAKDKQAKILVAKERELYFLSYNEEHPVHVVLSFADRLSSVVEMAVSVDNRRIGLF
TDKGRLWIGSSDLSGKGCEIDTSHACRPFQLAWCGSDGVVGVWDGTLLLVTVNGDILTYP
CDSRVHVVPEIDCVRVISTLTHEILQSVPSVVQKILRINSVDPGNYLLEASRQFQRRSHS
ADEYIRLVKDQLPIAVANCIEAAGYEFSPENQKMFIRAAQFGKGFVPNLDPEPYVTMCRV
LRVLNAVRNFKVCLPITNVQYIKMSESGLLDRLIRRRHYYMAIQICKHLKLPPAKGLSRI
LAEWAFYKVSQAKQDREQVAKEIADKLGKAPGISFKDIALRANNFGHTQLAIRLMDYEPR
AREQVPLLLNLGQEVPALLKAMESGDTDLVYTVLLRMHAKMPLADFYLKMRNYPLAHSLY
IKYSYENNNKELHDIYSQESDFNAQAALHLKEAYLPKNSGTRETSLAAARQSYKNARNEF
LAVACDEQLKLLKFQRDLEAKFRREFFGRSLHDTVEILLSLKELKLADSLRAEFKVPDRR
YWWLRILAHAQNDEWEQLEKFSKDKKSPIGYEPFVDVCLEKNKKLEAQKYMSRVKDDLKV
KYYAKIGMLEKAAQTAFEQKDVQALNVVQARCGAQDRHVVEQINTYLAQLRSKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcctgttaacagcggactggtgtcccgtggggagagatgagtattatcggaaa
tttgaagtctacaacatggaatggacaaactcttttaatatggaaaatgtcattgtcgcg
tcttgttcttatggtggtcctcttgcggtgcgtcgagaccccaagaaaattgtcaaggta
cagggaagtgggaagcccacaatatacatttacactgcagctggagaacttgtttcatca
attgtgttatcacgaccagtaatccatgtaggctggtcaatagcagacgatttactttgc
atagaagatgatggatcagttctgaggtatgatctgtttggaaatcaccaacatacattc
tccgtctgtgaagaggctaaaataacaaaagttattgaggccaatgtgttcaatagtagt
gtgggtggcacaggtgttgctattttgacgtcttcgtaccggttcttcttagttaacaat
gtgaaggatccgaaaactcatccaatgccagaaattccagggcttaatgctccaccaagc
agttgggcagtgattgcaaaagataaacaggcaaaaattcttgttgccaaagaaagggaa
ctgtatttcctatcctataatgaagagcatcctgttcatgtagtactaagctttgctgac
cgtttgagttctgtggtggaaatggcagtatcagtagacaaccgtcgaattggactattc
actgataagggaagattgtggattggatcatctgatctatcaggaaagggctgtgaaatt
gatacttcacatgcttgccgcccatttcagttagcatggtgtggaagtgatggagttgtt
ggtgtgtgggatggaacattattattggtcacagtaaatggtgatattcttacataccct
tgtgactcccgagttcatgtggttccagaaatagactgcgtcagggttatttccacttta
acacatgaaattttacagtctgtgccctcagtagttcagaaaattctgagaataaacagt
gtggaccccggaaattacctccttgaagcttcaaggcaattccagcgtcgaagtcatagc
gcagatgagtacatccgacttgttaaagatcaactacctatagctgtagcaaattgtata
gaggctgcaggctatgagttctccccagagaatcagaagatgttcataagggcggctcag
tttgggaaaggctttgttcctaatttagatccagagccatatgttacaatgtgtcgtgta
cttcgtgtgctcaatgcagttcgtaacttcaaagtctgccttcccatcactaatgtgcaa
tacatcaaaatgtctgagagtgggctacttgacaggttaataaggaggagacattattac
atggcaatacaaatatgcaagcatctcaagctacctccagctaagggcttaagccgtatc
ttagctgagtgggctttctacaaggtttctcaagcaaagcaagacagagaacaggttgca
aaagaaattgctgacaaacttggaaaggctccaggaatttcgtttaaggatattgcacta
cgagccaacaattttggccacactcagctggcaattcgtttaatggactatgaacctcga
gcaagagaacaagttccactgcttttgaatttgggacaggaggtcccagcattgttgaag
gctatggaaagtggggatactgatctagtttacacagttttgttgagaatgcatgcaaag
atgccccttgctgatttctatttgaaaatgagaaactatcctctcgctcattcactgtac
attaagtacagttatgaaaacaacaacaaagagctgcatgatatctattctcaagagtcg
gatttcaatgctcaagctgctttacatttgaaagaggcctacctgcccaaaaattctgga
actagagaaacatcattagcagctgcaagacaaagctacaaaaatgcacgaaatgaattt
ttggctgtagcatgtgatgagcagcttaaattattgaagtttcaacgagatttagaggcc
aaatttagaagagaattttttgggcgctctttgcatgacacagtagagatacttctgtct
ctaaaggagttgaaactagctgattctttacgcgctgaattcaaagttcctgatcgcagg
tactggtggcttcgcatcctagcccatgcacagaatgatgagtgggagcagcttgagaag
ttctctaaagataaaaagtcacccattggatatgagccctttgttgatgtctgcttggaa
aagaacaaaaaactagaggctcaaaaatatatgagtagagtaaaggatgacctgaaagtc
aagtactatgctaagattggtatgttggagaaagctgctcaaactgcatttgaacaaaag
gacgtgcaagctctcaatgttgttcaggcgaggtgtggcgctcaagatcgtcatgttgtg
gagcagataaatacttatttagctcagctaagaagcaagaagtaa
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