Thrips palmi (melon thrips): 117641855
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Entry
117641855 CDS
T08251
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117641855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117641855
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117641855
mRNA degradation factors
5'-3' decay
Lsm complex
117641855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117641855
NCBI-ProteinID:
XP_034235444
UniProt:
A0A6P8YEW3
LinkDB
All DBs
Position
Unknown
AA seq
140 aa
AA seq
DB search
MDKRITLEIPPRTATLIEELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGK
EYGDIPRGVFIVRGENVVLLGEIDQEKEDKLPLQEVSVDDILEAQRKEQDTKQDQEKLLA
KALKERGLQYIPDMSHDDMF
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgtatcacactggaaattcctcccagaactgctactcttatagaagagctt
gacaaaaaacttatggtcctcttacgagatggacgtaccctaataggttacctcagaagt
gtcgaccagtttgctaatcttgtacttcaccgtacaattgaaagaatacatgttggtaaa
gagtatggagatattcctagaggtgtattcattgttcgaggtgaaaatgttgttcttctt
ggtgaaatagatcaagaaaaagaagataagctgcctttgcaggaagtatctgtcgatgac
attcttgaagcccagcggaaggaacaagacacaaagcaggatcaagagaagcttcttgca
aaggcactgaaggagagaggccttcagtacattccagatatgagccatgatgatatgttt
tag
DBGET
integrated database retrieval system
