Thrips palmi (melon thrips): 117642144
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Entry
117642144 CDS
T08251
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117642144
Membrane trafficking [BR:
tpal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
117642144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
117642144
NCBI-ProteinID:
XP_034235920
UniProt:
A0A6P8YG89
LinkDB
All DBs
Position
Unknown
AA seq
1535 aa
AA seq
DB search
MYFPIGWPRVLSFPQQGQCSIRQVICNRDKILFAILTDDSLSIWFCKPCLPIVSHRRPGE
SVQAIGSNESVEWRPDSSMLAVITSGGYILLYHLGVRPDQKGLYEQIDSPVPSLRRDSAE
LFLQESIPPLLLTLEQEISVFDGALTCIACIRDELMVATSQSHILRYRWDGSQNRDYNLD
LRRIPFCIDQQVSKAIPIVEANTYVVSIDYSPLVGGFAVVLNDGRAAFLTASTLKFDPNV
TPNEEENNSANFERRRQVQGIWAQNIDDATCAAVNHKYRLIAYGRKNSQAVVCCVDETTG
GLEVTHEMVLSPKDYPGCPGRVRCIRWTPDGRCVAMAWANGGLSLWSTFGALLLCSLGWD
YGLHSESASASLLNIQSMEWSAEGYQLWMVRRFPDKDLGGDDGLEQPSDAVVLLDFVKSA
LTVNPCMGHLNHLYLQGEDKLYINLGATGLPSPKKSSGDESLFVPGSGLSFTETPVNSSK
GISNNSQLMGTKQWVVVPLPSTYSAANWPIRYTAMDLSGEHLAVAGRAGLALYSVGTRRW
KLFGSESQERDIIVSGGLLWWGSYIVLAAYSVASDCDQLRLYPRDSKLDNSFATVTKLPA
QALLLNILQDRLVTFCSDARVSIYALSTKDNASSGASVDVTALQMIDISALCVHPACVVS
LALTPLRTESGRSQQNTQQMESIVMNVSGRLLMVQREHGRIDPRTPHSDELFHCTPPTVL
ASCVEHVWVPNRSVIEKPHLTEALWLFCGAHGMRVWLPLFPRSKDNQHSFMAKRIMLPFH
LRIYPLAILFEDAILLGVENDTLLYTSDQKSPFSLPFCVLERTSQVYLHQILRQLIRRNL
GYHAWEIARSCTALPYFPHSLELLLHEVLEEEATSKQPIPDALLPSVVEFIQEFPVYLET
VAHCARKTEIALWPYLFAAAGKPKDLFQECLARRQLDTAASYLIILQNLEPSSVSRQYAT
LLLDAALENCHWELSKDLVRFLRAIDPNDVESPRASFVLPGPTLRYGLSPQSPPLSPSQE
DLTLVLGTMHLSRGRSFSTTLTPKLDVGSKEGSNLLPLRRDSILKGLPGAPAPTPGVAVP
LRRKKSVPTGRGDSRDISGSAEEFFMDVILQRHARRLLSARRLADLGRFAARLDFHLVAW
LARERDRAARVDDPVASLQQLHSDFSWPHPAVLSPLAHCLDRNKSSILTEEHLQSLSIDV
TSLPTGVVGNLGSGSRIGDSGYMSQSGVPNRLLPHNYSEYLTSPSCIEEARLVPHTIADD
RSIVSEESSYWGDEKERERGQYSPDDASGTWSHAAADMTSTLEQLNTESSNKGSQKSEVQ
LRYLLQLMTEAGCLEWALILAILLHDAMAVVRTTAAARAPSQSYTCVLRLRDTITTLTSW
SNTECLGYKPFMMAIQGQVGVLTKLMTSKQQQHQLQQFQLHQQLHQQSLLQGTPPPTSNN
AYPIDDSANQECYNSEVSLAKVERAVVTPSSSRPRSDTASSSSTVTTGPCPSSGVSAQES
GVDIVQEGVDVGKGDDSYPLPLEAKPEAEAGCIIS
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgtacttccccataggatggcctagggtcttaagtttccctcaacaaggtcaatgttct
attcgccaagtaatatgtaacagggacaagattctctttgctattttgacagacgattct
ctgtcaatttggttttgcaagccatgtctcccgatcgtgtcgcatcggcggcctggagag
tcagtgcaagccatcggcagcaacgaatctgtggaatggagaccagattccagtatgctt
gcggtcattacatctggtggttatatactactgtaccaccttggtgtgcgacctgaccaa
aaagggctgtacgagcaaattgattcacctgtgcctagccttaggagagacagtgcagaa
ttgtttcttcaagaatccattccaccacttttgctaacattggaacaagaaattagtgtc
ttcgacggtgccttaacatgtattgcttgtatacgagatgagttgatggtagcgacttct
caaagccacattctacgctatcgctgggatggttcccagaatcgagattacaatttggac
cttcgaagaatacccttttgcatagatcaacaagtttccaaagcaataccgattgttgag
gccaacacctatgttgttagcattgattattcacctcttgtgggaggatttgctgtggtt
cttaatgatggaagagctgcattcctgaccgcctcaactcttaaatttgaccccaatgtg
accccaaacgaagaggaaaataattctgccaattttgaaagaaggaggcaagtgcaaggg
atttgggcgcagaatattgatgacgcgacatgtgctgctgtcaatcacaaatatcgacta
atagcctatggaaggaaaaactcgcaagctgttgtgtgttgcgttgatgaaaccactggc
ggattggaagtcactcatgaaatggtgctctcacctaaagactaccctgggtgcccagga
agagttcgctgcattcgatggactcctgatggacgctgtgtggcaatggcctgggccaat
gggggcctttctttgtggagcacctttggagcccttttgttgtgctccttgggctgggac
tatggcttgcacagtgagtcagcaagtgcaagccttttaaatattcagagcatggagtgg
agtgcagaaggataccaattatggatggttcgtcgatttcctgataaagatctaggtggt
gatgatggtcttgaacagccatcagatgcagttgttctcctagactttgtgaaaagtgca
ctaactgtcaatccttgcatgggacacttaaatcacctgtaccttcaaggggaagacaaa
ctgtatataaacctgggtgctaccggcttgcctagccccaaaaaatcttcaggagatgaa
tcattgtttgtgccaggttctggtttgtcatttactgaaactcctgttaactctagcaaa
ggtataagcaacaacagtcagttgatgggaaccaaacagtgggttgttgtgcctttgccc
tcaacatattcagctgcaaattggcccattcgatacactgccatggatctttctggagag
cacttagcagttgccggtcgagcaggtctggcattgtattctgtgggaacacgtagatgg
aagctatttggaagtgaaagtcaagaaagagacatcattgtatcaggggggttattgtgg
tggggctcttatatcgttcttgctgcatacagtgttgcatcagactgtgaccaactacgt
ctgtatcctagagattcgaaacttgataattctttcgcaactgtaactaaactacctgcc
caggctttgttactgaatatacttcaggaccgcctagtgacattctgctctgatgcccga
gtttcgatttatgccctttccactaaggacaatgccagctctggtgcttcagttgatgtc
acagctcttcaaatgatagacatcagcgctctttgtgtgcatcctgcttgtgttgtatct
cttgctctcactcctcttcgtactgagtcaggaaggagccagcaaaacactcagcagatg
gaaagtattgttatgaatgtaagtgggaggttgctaatggtccaaagagaacatggaaga
atagatccccgcacacctcacagtgatgagctgtttcattgcactccacccactgttttg
gcttcttgtgttgagcatgtttgggtgcctaaccgaagtgttatagaaaagccacatctc
acagaggctttgtggctgttttgtggagcccatggaatgagagtgtggttaccactgttt
ccaagatctaaagacaaccaacatagtttcatggcaaaacgaattatgcttcccttccat
cttcggatttatcctttagctatactgtttgaagatgctattctcctaggagttgaaaat
gacactcttctttacacgtcagaccaaaagagtccattttctcttccattttgtgtttta
gagcgaactagccaagtttatctccatcaaattctacgtcaacttataaggcgcaacttg
ggttaccatgcatgggaaatcgccagaagttgtacggcactgccatattttcctcactca
ttagaactactccttcatgaggttttggaggaggaagcaacaagcaaacaacctattcct
gatgctttgttgcctagtgtagttgagttcattcaagagttcccagtctacttagaaaca
gttgctcattgtgcaaggaaaactgaaattgcattatggccgtacctttttgctgctgca
ggcaaacccaaagacctctttcaagagtgtttggctagaaggcagcttgatactgctgct
tcatatttaattatacttcagaatctggagccatcatccgtaagtcggcaatatgctaca
cttctgttagatgcagctcttgaaaactgtcactgggagctttctaaggatttagttcga
tttttaagagccattgaccccaatgatgtggagtctccacgagcatcctttgtcctacca
ggccccactctgcgctatggtttaagtccgcagtctcctcctctcagtccaagtcaagag
gaccttacccttgttcttggcaccatgcatctctcaagagggcgcagtttcagcactacc
cttacgcccaaacttgatgtaggatcaaaggagggaagcaatttgttacctttacggcgt
gacagcattttgaaaggactcccaggagctccagctcccacgccaggagtagctgtacct
ctgcgtcgtaagaaatctgttcccactggaagaggagactcaagggatatctctggctct
gcggaagagtttttcatggacgtgattctccagaggcacgctcgccggttgctctcggcg
cgccgtttggctgacttgggtcgctttgccgcgcggctcgacttccacctcgtggcgtgg
ctggcgcgagagcgcgacagggcggcccgcgtggacgacccggtggcctcgctgcagcag
ctgcactccgacttcagctggccccacccagcagtgctgtctcccctggcgcattgcctg
gacaggaacaagtcgagtattctcacagaggagcatttgcagtctctcagcatcgacgtc
accagcttaccgacaggtgttgttggaaatttaggaagtggcagtcggataggtgatagt
ggttacatgagccagtctggggtccctaatagacttcttcctcacaactactccgagtac
ctcactagtccaagttgcatcgaggaagcgaggcttgttcctcacaccattgcagatgat
cgaagcattgttagtgaggaaagctcgtactggggagatgaaaaagaacgagagagaggg
caatactctccagatgatgccagcggtacatggagtcatgctgctgcagacatgactagc
acccttgagcaattaaacactgaatcatccaataaaggttcacagaaatctgaagttcag
ttgagatatctccttcaattgatgacagaagctgggtgtcttgagtgggctttgatttta
gctattttacttcatgatgccatggcagttgtccgaacaacagctgctgcacgtgcccca
tcccagtcatacacttgtgtgcttcgactgcgggataccattactacactcacaagttgg
agtaacacagaatgcctggggtataaaccgttcatgatggcaattcagggccaagttgga
gttctcacaaagttaatgactagtaaacagcaacaacaccaactccagcagtttcaactt
catcaacaactgcatcaacagagtttgttgcaagggactccaccacctacttctaataat
gcttaccctattgatgatagcgccaatcaggaatgttacaattctgaggtgtctttggcc
aaagtggagcgtgctgtggtgacaccaagtagtagccgaccccgatctgatacagccagc
agttcgtcaacagtcaccacgggcccttgccctagctctggagtttctgctcaagaaagt
ggggttgatattgttcaagagggtgttgatgttggaaagggagatgactcgtacccactg
ccccttgaggcaaagccagaagctgaggcgggttgtatcatttcatag
DBGET
integrated database retrieval system
