Thrips palmi (melon thrips): 117642204
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Entry
117642204 CDS
T08251
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03013
Nucleocytoplasmic transport
tpal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117642204
03015 mRNA surveillance pathway
117642204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117642204
03041 Spliceosome [BR:
tpal03041
]
117642204
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117642204
Spliceosome [BR:
tpal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
117642204
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
117642204
NCBI-ProteinID:
XP_034236076
UniProt:
A0A6P8YHL0
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MMYTGTTAEQDNRFSDKEKKLLKQMKFSDSLTRRVDMSKVKLDSIKPWITKKLTEILKLE
DDVVVEFVFNQLEEKFPDPKKMQINLTGFLNGKNARLFMQELWDLLLSAQDSVTGIPTQF
LEQKKEEIKKRMEEQEKLHETLAKKVEKDKEDKKEKKRDRSRSKSREKKRSRSKSREKKR
SGSRDRHREKDKRDKDRRKDKDKEKVKDKPKDGSIKEVESDKPKEKEEEDKGSSATAPEN
SQSNGDIPDKEQVEQEPSGNGDTAPKGRWDSKEVVVKEEPKDPEEVKRDRSRSHSSSASS
RSSRKEKVDEKKDRHSSRSSSYSSDDSRKGKHSGKDADFEIRKKEDSVQKKRHYRSNNRD
SSGSDSDRGRSNRRDHRGSFGSPPRSRRRDDDRDRDRDRDRRDRDRDRERERERDRERER
ERRRRSLERERERERERERERVRRDRERERERERERERERQRLSSGRRRSPRRSSPRSNS
RRSPRRDSPRRSPRRSPRRSPRRSVRRSESPRNKSASSKHSPSPRRSISDSRQPPSRSQD
NKLDKKSRSRSPIVAVKKPVAEGSRSSSGTPSPVKKDKEVKSIKSKRSKSSDSEDETLPK
KPPTQPVKALHGRTESRSKSPPAAKSTRLSRSKSRSSSRDSSRSRSKSDSRTPKKKPEPV
SVKTDSSAEQKADKKQTLSSGDTLSTSKAARKKSESRSPSPKRKKLNSSKEEVQTSDSEN
SHDDNKKEKKKPTESSPETTEKSKKKRKKKKKAAGSSSESEESDAEASGKKKKKDKKHKK
HKKHKKTKKAKKHKSDASEESAESGTERGESLERRLRERALKSMKREDNSDDSK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacagggaccactgcggagcaagacaaccgcttcagtgacaaagagaagaaa
cttttgaagcaaatgaaattcagcgacagcttaacaagaagagttgacatgtcaaaagtt
aagctggactcgataaaaccatggattacaaagaagctgaccgagattctcaagcttgaa
gatgatgttgtcgtggaatttgtattcaatcaactggaggaaaagttcccggaccccaag
aagatgcagatcaatttgactggattcttgaatggaaagaatgctcgcctcttcatgcaa
gaactatgggatctactgttgtcagctcaggactctgtgactggaataccaactcaattc
ctggagcagaaaaaggaggaaattaagaagagaatggaggagcaagagaaattgcatgaa
acccttgcaaagaaagtagagaaagataaagaagacaaaaaagaaaagaagagggacaga
agccgtagcaaaagccgtgaaaagaagagaagtcgcagtaaaagccgtgaaaagaagaga
agtggctctcgtgacaggcaccgtgaaaaggacaagagggataaggaccgcagaaaggac
aaggataaagaaaaggtgaaggacaaaccaaaggatggatctattaaagaagttgaaagt
gacaagcccaaggagaaagaagaggaagacaaaggatcttctgcgactgctcctgaaaac
agtcaaagcaatggtgatatccctgataaagagcaagtggagcaggagccttcaggaaat
ggcgacactgcacccaaaggccgatgggatagcaaagaagttgtagttaaagaggagcca
aaggacccagaagaagtcaagcgtgataggtctcgctcacatagctcgtctgcatcttca
aggtcatcacgaaaagaaaaggtggatgaaaagaaagacaggcattcatcacgttcaagc
agttacagttctgatgattcccgtaaaggaaagcattcaggtaaagatgcagactttgaa
attagaaaaaaggaggatagtgttcagaagaaaaggcattatcgctcaaataatagggac
tcttctggatctgattcagaccgtggtcgctcaaacaggagagatcatagagggagtttt
ggctcacccccgaggtctcgtcgacgagatgatgatagggatcgtgacagggacagggat
cggagggaccgggatcgggacagggaacgagagcgcgaaagggatcgagaaagagagaga
gaacgtcgccgtcgttcgctagaacgtgagagggaaagggagagggagagagagcgcgag
agggtccgacgggaccgggaacgggagagggagagagaaagggagagggagagggaaagg
cagagactgtcatcagggaggcggaggagcccacgccggagttcacccaggtccaattcc
cgcaggagccctcgtagagatagtccacgacgatctccccgaagaagtcccaggcggagc
ccacgcaggagtgtgcggaggtcggagtcaccacgaaacaagagcgcgtcctccaagcac
tcaccatcacctcgacggagtatatcagactccaggcagcctccctcacggtcacaagat
aataaattagataaaaaatctagatctcgtagtcccattgttgctgtaaagaagccagtt
gcagagggttcacgcagctcttctggtaccccttcccctgtgaaaaaggataaagaagtc
aaatccatcaaaagtaaacggtccaagtcttctgattcagaagatgaaactctgcccaag
aaaccaccaactcaaccagttaaggcgttgcatggaagaacagagtctcgatccaaatct
ccaccggcggcaaagtctactagattgtctcgatcaaagtccaggtcttcttctagagac
tcctctcggtcaaggtccaagtctgactcccgaacaccaaagaagaaacctgaacctgtt
tctgttaaaacagattccagtgcagagcagaaagctgataagaaacagacactttcttca
ggtgataccttatcaaccagtaaagctgcccggaagaagagtgaatcaagatccccttcg
cctaaaagaaagaaattgaacagctccaaagaggaggttcaaacatcagattctgaaaac
tcgcatgatgataataaaaaagagaagaagaaacctacagaatccagcccagagacaaca
gagaaatccaagaagaaaaggaagaaaaagaagaaagcggctggttctagcagtgaatct
gaagaaagtgatgctgaggcaagtggaaaaaagaaaaagaaggacaaaaagcataagaag
cacaagaaacataagaagaccaagaaggctaaaaagcacaaatctgatgctagtgaggaa
tctgctgaaagtggaactgagaggggtgaatcacttgaaagacgcttaagggaacgtgca
ttgaagtctatgaaaagagaagacaacagtgatgacagtaaatag
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