Thrips palmi (melon thrips): 117642220
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Entry
117642220 CDS
T08251
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04120
Ubiquitin mediated proteolysis
tpal04137
Mitophagy - animal
tpal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117642220
04120 Ubiquitin mediated proteolysis
117642220
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117642220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117642220
04121 Ubiquitin system [BR:
tpal04121
]
117642220
03029 Mitochondrial biogenesis [BR:
tpal03029
]
117642220
Enzymes [BR:
tpal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117642220
Membrane trafficking [BR:
tpal04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
117642220
Aggrephagy
Other aggrephagy associated proteins
117642220
Xenophagy
Other xenophagy associated proteins
117642220
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117642220
Mitochondrial biogenesis [BR:
tpal03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117642220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
ubiquitin
IBR
Rad60-SLD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
117642220
NCBI-ProteinID:
XP_034236060
UniProt:
A0A6P8YGM1
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MIVDFIRHLIQAIMQLIFPVKMKVSYGLKVYIKSSTGNMLVELDPKWDIRSLKERVAPKL
GLAPEDVKIIFAGKELMDSIVIEECDLGQQSILHAVKIRHVDKSQSSGNTSESHGSRPMN
ETLMDWQLTAKECKNLTTDEERERRKAHFYVYCPSPCKGMQQGKLRVRCDSCRSGAFTVD
RDPQCWADVLQKHRITGTCEDEVCQDSHTDGPQFAEFFMKCAEHASQGEEDQAVPLYLIK
PNVRDIPCLACTEVSDPVLVFPCKEGHVTCLDCFRTYCVSRLRDRQFWSHPDLGYTLPCP
AGCPDSLIEEVHHFHLLTNEQLRMYQQFGTEEFVLQAGGVLCPQPGCGMGILAPEDCRRI
QCQNGCGFVFCRQCLQGFHLGECSETGEGLMDRKEGSCQYNVDPVNASQARWDEASKVAI
RVTTKPCPKCRTATERDGGCMHMVCTRPQCGFHWCWVCQTEWTRECMGSHWFG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgatttcattagacacttgattcaagcaatcatgcagttaatatttccagta
aagatgaaagtttcatatgggttaaaagtttacattaaatcaagtactgggaacatgtta
gtcgagctagacccgaaatgggatattcgaagtttaaaggaacgggtagcaccgaagttg
ggcctggctcctgaggacgtcaaaattatctttgctgggaaagaactcatggattcaatc
gttattgaggaatgtgacttgggccagcagagtattctacatgcagtgaaaatacgccat
gttgataaaagtcaatcttctggaaatacctcggagtcccatggatcaagaccaatgaat
gaaaccttgatggattggcaactaacagcgaaggagtgtaagaatttgacaactgatgaa
gagcgtgagcgcaggaaggcacatttctatgtgtactgcccctctccatgcaagggaatg
caacagggaaagctaagagttaggtgtgactcatgtcggagtggtgccttcactgttgat
cgtgatccacagtgctgggctgatgttctgcaaaagcatcgcattactgggacgtgtgaa
gatgaagtctgtcaggattctcacacagatgggcctcaatttgcagagttctttatgaag
tgtgcagaacatgcatcacaaggtgaagaggaccaagctgtgcctttgtacttaatcaaa
ccaaatgtgagggatattccctgccttgcatgtactgaagtcagtgatccagttttagtg
ttcccttgcaaagaagggcatgtgacatgcttggattgttttcgaacttattgtgtctca
cgcctcagagatcgacagttttggtcgcatccagacttaggatatactctaccatgtcct
gctggctgtcctgattccttgattgaggaagttcatcattttcatttgctcaccaacgag
cagcttaggatgtatcagcaatttggaaccgaggaatttgttcttcaagcaggaggtgtg
ctttgcccacagcccggctgtggcatgggtattttagctcctgaagactgccgtcgaatc
cagtgtcagaatggctgtgggtttgttttctgccgtcaatgcctgcaaggattccacctt
ggagagtgctctgaaacaggggagggactcatggaccggaaagaaggaagttgccagtac
aatgtggatccagttaatgctagtcaggctcgttgggatgaggcaagcaaagttgccatc
cgcgttactacaaagccatgtcctaaatgccgtactgcaactgagagagatggtggatgc
atgcatatggtatgcacaagaccccagtgtggtttccattggtgctgggtctgtcaaaca
gagtggaccagagaatgtatgggtagtcattggtttggctga
DBGET
integrated database retrieval system
