Thrips palmi (melon thrips): 117642294
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Entry
117642294 CDS
T08251
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117642294
04121 Ubiquitin system [BR:
tpal04121
]
117642294
Enzymes [BR:
tpal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117642294
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117642294
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117642294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
TEN_NHL
COG5_N
ANCHR-like_BBOX
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
117642294
NCBI-ProteinID:
XP_034236225
UniProt:
A0A6P8YH18
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MMMATSALASCLANGLGALCDPTASPPFSSWGFSSGLNSSGSSIYGSSPSTGSSREPSIG
SIGSIDLQEMLQALNGDLLDADVDATCRNCERLPVARCSACNTVLCKPCAGCHHSDHVLI
RVEDGLPFNMAVPPPCLPKPPMHLSMAVTRPPSVPPSLTTRAPPPSSRPAARQARSPPTR
MAVLPRAAALCEVHAGEVLVSYCETCSVGTCSACAASASHVGHTLAQLTVVKGVTEKYLR
DATAGAQAARDHLERNSGVAAAVEAKAMQVASDIRCCTRQMVAAIEARERQLLADVQEIA
SLKARSLQVQADVLRSLHERYVRLSESLRDTLALGQGVDVVHARDKAAVELAQLRAAKAN
NTGRPSQQPYEDETITFTPPEPILSKALTSMGAVSSSGYALSSVAAGEGLTRAVRGRPAA
FTVHVKSHLEASVPVVPGELDVVLVAPEGGANVRGDVEDRGDGTAVVVYRARAEGLHALH
VLLRGRHIVGSPFSVAVRPPRSYDGVRAASATIGGEGSEEGRFLRPWGVCCDRQGRIIVA
DRSNNRIQVFGADGKFAFAFGSQGTAPGQFDRPAGVAVDLGGRIVVADKDNHRVQIFDPE
GRFIKTFGQCGAQNGNFNYPWDVDVNGSGEIVVSDTRNNRIQLFSPEGTFLRKYGWETTT
SMWRHFDTPRGVAFNRDGYVICTDFNNHRLVVVEPSFRHARFLGGEGSGPKQFQRPQGVA
IDGDNNIIVADSRNNRVQVFEGNGIYRCQIGLPVEMDRPSGVCVTPDGKIAVVDFGNNRV
LLL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcgacttcagccttggcgtcctgcctggccaacggcctcggggcgctgtgc
gacccgacggccagcccgcccttctccagctggggcttcagcagcgggctcaactcctcg
ggatcatcaatttacggctcctcgccgtcgacggggtccagcagggagccgagcatcggg
tcgatcggctccatcgacctgcaggagatgctgcaggccctgaacggcgacttgctggac
gccgacgtggacgccacctgccgaaactgcgagagactgcccgtcgcgcgatgctccgcg
tgcaacacggtgctgtgcaaaccatgcgcgggttgccatcactcggaccacgtgctgatt
cgagtggaggacgggctgcccttcaacatggcggtgccgccgccgtgcctgcccaagccg
cccatgcacctgtccatggcagtgacgaggccgccgtcggtacctccttcgctcaccacc
agggcgccgccccccagctccaggccggcggccaggcaggcccgcagcccaccgacccgg
atggcggtgctgccccgggccgccgccctctgcgaggtgcacgccggggaagtcctggtt
tcgtactgcgagacctgcagtgtggggacctgctcagcgtgcgcggcgtccgccagccac
gtcggccacaccctggctcagctgaccgtcgtcaagggcgtcaccgagaagtacctccgg
gacgcgacggcgggggcacaggccgcgcgggatcacctggaaaggaactccggtgtcgcg
gcggccgtggaggccaaggcgatgcaggtggcttcggacatccgctgctgcacccgccag
atggtggcggccatcgaggcgcgggagcggcagctgctcgccgacgtccaggagatcgcc
agcctcaaggcgaggtcgctgcaagtgcaggcggacgtgctgcgctccctccacgagcgc
tacgtgaggctgtccgagtccctgcgcgacaccctcgccctcggccagggcgtcgacgtg
gtgcacgcgcgggacaaggcggccgtggagctggcccagctgcgtgcggccaaggccaac
aacaccggccggccctcgcagcagccctacgaggacgagacgatcaccttcacgccgccg
gagcccatcctcagcaaggcgctgacgtccatgggcgcagtctccagctcgggctacgcg
ctgtcgagcgtggccgccggcgaggggctgacgcgtgccgtgcggggccgccctgccgcc
ttcacggtgcacgtcaagtcgcacctggaggcctccgtgccggtggtgcccggcgagctg
gacgtggtgctggtggcgccggagggcggtgccaacgtgcggggcgacgtggaggaccgc
ggcgacggcacggccgtggtggtgtaccgggcgcgcgccgaggggctgcacgccctgcac
gtgttgctgcgcggccgccacatcgtgggaagccccttctccgtggcggtgaggccgccc
cggtcctacgacggcgtgcgcgcggcctcggccaccatcggcggcgagggcagcgaggag
ggccgcttcctgcgcccctggggcgtgtgctgcgaccgccagggccgcatcatcgtggca
gaccggtccaacaaccgcatccaggtgttcggcgcggacggcaagttcgccttcgccttc
gggtctcagggcaccgcgccggggcagttcgaccggcccgccggggtggccgtggacctc
ggcggccgcatcgtcgtggccgacaaggacaatcaccgggttcagatatttgatcctgaa
gggcgcttcatcaagactttcggccagtgtggggcccaaaacgggaacttcaactacccc
tgggacgtggatgtgaatggctccggagagatcgtggtgtcggacacccgaaacaatcgc
atccagctgttctctccggagggcacattcctccgcaagtacggctgggagaccaccacc
tcaatgtggcggcactttgacacccctcgcggagtggcgtttaaccgcgatgggtacgtc
atatgtaccgacttcaacaaccaccggttggtggtggtggagccctccttccggcacgcc
cgcttcctggggggcgaggggtcgggcccgaagcagttccagcggccccagggcgtggcg
attgacggcgacaacaacatcatcgtcgccgactcccggaacaaccgcgtgcaggtgttc
gagggcaacggcatctatcgttgccaaatcggcctgcccgtggagatggacaggccctcc
ggcgtctgcgtcacgccggatggcaaaatagctgttgtggattttggtaataatagagtg
ttgttactttaa
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integrated database retrieval system
