Thrips palmi (melon thrips): 117642554
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Entry
117642554 CDS
T08251
Name
(RefSeq) fl(2)d-associated complex component-like isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117642554
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117642554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_DUS3L
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
117642554
NCBI-ProteinID:
XP_034236720
UniProt:
A0A6P8YI88
LinkDB
All DBs
Position
Unknown
AA seq
1364 aa
AA seq
DB search
MSKQQTRRKITLDSSLKQVHSNPTKDTHRRPSVFERLGTKAITSNPGLGAGNASQCSPSP
NVKPKPTESFCRQWEQNGTCQYGKNCKYVSTHALISPSKRAAIKDASSKTNNKSCSSSSS
SGSSSTGSESTSSEDTSSSGSSESVESSRHHRHRAKHVNSRKLKRYSSSSDKEHSKRNNL
RAGKGLSPNKKGSHSVSAVNASALHKEMKHTKKRRSRDRSAGRSSPRKGGLGSTSGLKKS
LSPLGPGLPGRSSNANSHKRRSQSPMLKGGKLGVQSSKLGLNSRNIGPQHNARSPPNHKG
SRDRDRNREKEEREREREMEKEKERERENKKQRERELEKQRERERDREKEREKDRNRSRS
PKMKMKEVISRSPRKDLKRRESPDPHHKPGRLSGGSQKGRDDGPSSKHKAPVGDHWHRKD
DKEEDRKRGDERRHKDDSRKDARLLTGLIEKEHIRDRDRDRERERVHDREREKDKTKSLL
QQGIPSLLTLNLHPNDFNAHAGGGGKERGVERNRSLERTGLLRNISMDRGRERSLDRVSE
RSRGSERDRRCRNNNGGLEKGLDHSGLEKELAKALARNREQERTFERNERVPERGLERGP
DRGLDRGLERGLDRSVDRGLERGMDRNIKNERGLDRASPRVLDRDNDRGLERGLDRDPVQ
GRLERGFDRALERGLERGSPRLDRDHRFSDRSPGDRLFGATHLDHRESDDKGFDGMFEGR
RDRGRFSDQSRYEKGVPLNDDRRMGPSDSVGFNEDRRRGRDGNRQEGRVGQWDARNERKR
DHNHEREHGREREHGPRPYDGGQRPPGPNNPGKRNDWEWDQRGRRSGKDWDGPHRPDNSS
VEKEWGRFPPGQNDWSGPPGDRRSGGWNDEWRSNNQNSPAAQLLQNRPPGRMLPLRDDSQ
NLLHKTDDLGTEEGLKGKDQTVLSDNKNDTKVDAKIENDTNHTMNHKRTREIGDGDDVSA
DSKRPYLEKDSALDEVLSDISDDADEILNREDSELNQLSHGDTAPAAGKENRLGNQQSAL
LSQANQAAASHTHHRRTGEGGENSGNLGFEEISDGELEEEARARGISDALGVDWASLVAE
TRPRLKIEKAGSTRQRWEGVTLLTYIGVSVEYAGPKLVKYILNSALSPQQDTSDKDSTIK
VDEVSSSQEPEDAVDKASCSGVVEPGKQETNAKSEGVSDNDKQCGHSKTENLEEHPSINE
TDKLDISISKSLPAAENSLKANSEFMASGAKSKMVSDSKIKDTPSDSKCSVKSNCDQAGG
GEESVHEPQRNKTVKQENENQDKQQCFKLLHPVAGIHAALLERKARRQALFSSSGPYKRA
LSARRDLAIRRQLCNLPPRETTCDNNPAADELFRLSLQLLERAS
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcagcagacaaggcgtaaaattacgttagactcgtccctgaagcaagtgcat
agtaaccctaccaaagacactcatcgtcgtcctagcgtcttcgagaggttagggactaaa
gccatcacctccaatccgggtctgggtgcgggcaatgctagccagtgctcgccttcgccc
aatgtgaagccgaagccgaccgagagcttctgcaggcaatgggaacagaatggaacctgc
cagtatgggaaaaactgcaagtatgtcagcactcacgcattgatcagtccctcaaaacga
gccgcaattaaggatgccagctcaaagaccaacaataagagttgtagtagctcgtcttct
tctggtagctcaagcactggaagtgagtcaacatcaagtgaagatactagcagctctggc
agctcagaatcagttgagtcaagcaggcaccatcgccacagggccaagcatgtaaattca
aggaagttgaagagatactccagttcttctgacaaagagcactccaaaagaaataaccta
agagctgggaaaggactgagtccaaacaagaagggctcccactctgtctcggcagtaaat
gcaagtgctctacataaagaaatgaagcacactaagaagcgtagatcgcgagaccgatct
gccggtcgcagctcaccaagaaagggtggtctaggaagcacatcaggcttgaagaaatcc
cttagtcccctagggcctgggctgcctgggcgcagcagcaacgctaacagtcacaagcgc
cgctctcagtcgcccatgctgaaaggaggaaaacttggggtgcagtcgtcaaaacttggg
ttgaacagtcgcaatattggacctcagcataatgccagatctcctcccaatcataaaggt
tccagggacagggataggaatcgtgaaaaggaagaaagagaacgtgaacgagaaatggag
aaagagaaagaaagagaaagagagaacaagaaacaaagagaaagagaacttgaaaagcag
agagaaagagagagagacagggaaaaagaacgagagaaagatcgcaatagaagtagatcc
cccaaaatgaagatgaaggaagtcatttctcgttctcctcgaaaggatttaaaacgcagg
gagtcacctgatccccatcacaaacccggccgtctatctggtggtagtcagaagggtagg
gatgatggtcccagttcgaaacacaaggctcctgttggtgaccattggcacaggaaagat
gacaaggaagaagatagaaagcgtggagatgaaagacgtcataaagatgattctcggaaa
gatgctcgtttactcactggtctaattgaaaaagagcatattcgtgaccgtgacagagat
cgtgaaagagaacgcgtccatgatcgtgaacgagagaaggataagacaaaatcattacta
cagcagggcattccgtcactcctcacgctcaatttacatccaaatgatttcaatgctcat
gctggtggtggtggaaaagaacgtggagttgaaaggaatcgaagtttggagaggacgggt
ctactgagaaatatcagcatggatcggggccgtgaacgtagtttggaccgtgtttctgaa
agaagcagaggaagtgagcgcgacagaagatgtcgaaataataatggtgggctagaaaaa
ggcctggatcacagtggtttagaaaaggaattagctaaagctcttgcccgtaatagagag
caggagcggacgtttgaaagaaatgaaagagttcctgaaagaggtttggagcgtgggccg
gatagaggattagatagagggctggagcgaggattggaccgaagtgtagatagaggccta
gaacgtggtatggatagaaatatcaagaatgaaagaggcctggatcgtgcttctcctcgg
gtcttggatagagataatgacagaggtttagagagaggtcttgatcgtgacccagtacag
ggaagattagaacgtggtttcgacagggctttggagaggggacttgaaagagggtcacct
cgcctggatagagaccatagattttcagaccgttctccaggggaccggctatttggtgcc
acccatctggatcacagagaatctgatgataaagggtttgatggaatgtttgaaggtaga
agagatcgaggcagattttcagaccaaagccgttatgaaaaaggagtccctcttaatgat
gatcgtcgcatggggccttctgactccgttggttttaatgaagatcgaagacgaggtcgt
gatggcaaccgtcaggaaggaagagtcggtcagtgggatgctcgaaatgaacgcaaaaga
gatcataaccatgagcgtgaacatgggagagagagagaacacggacctcgcccttatgat
ggtggtcaacggccacctggacccaacaatccaggaaagcgcaatgattgggagtgggat
cagcgtgggagacgatcaggcaaagactgggatggacctcatcgacctgacaattcctct
gtggaaaaggagtggggtcgatttcctcctggccaaaacgactggtcagggccaccagga
gatcgacgctctggcggttggaatgatgaatggcgctccaataatcagaatagccctgca
gcccagttgctgcagaatcgacctccaggtcgtatgctacctttgagggatgactctcaa
aatctactgcataaaactgatgaccttggaactgaagaaggattgaaggggaaggatcag
actgttttaagtgataataaaaatgatacaaaagttgatgcaaaaattgaaaatgataca
aatcatacaatgaatcataaaagaactcgtgaaattggagatggagatgatgtgtcagct
gatagcaaacgaccttacttggagaaggattctgctcttgatgaagtcctaagtgatatt
agtgatgatgcagatgaaattctgaacagagaagacagtgagcttaatcagttgtcacat
ggggatacagcaccagcagctggcaaagagaaccgtttaggtaatcagcaatctgcattg
ctttcccaagcaaatcaagctgcagcttctcatactcatcacaggagaactggtgagggt
ggagaaaattcaggaaatctcggctttgaagagatatctgatggagaattagaagaggag
gcccgagccagaggtattagtgatgctttgggtgttgactgggcaagtttagttgcggaa
actcgacctagattgaaaattgagaaggccggaagcacacgtcaacgctgggagggagtc
acattattgacatacattggagtgtctgttgagtatgctggtccaaaattagtcaaatat
atcttgaattctgcgttaagtccacagcaggacacttcagacaaagattctacaatcaaa
gttgacgaggtctctagcagtcaagaacctgaagacgcagttgataaagctagttgtagt
ggtgttgtggaaccgggcaaacaggaaaccaatgcaaagtcggaaggtgttagtgacaat
gataaacaatgtggtcatagcaaaacagagaatttagaggagcatcctagtattaatgaa
actgataagttagatattagtatttcaaagagtttaccagctgcagagaattctttaaaa
gccaacagtgaatttatggcatcaggtgctaagtcaaaaatggtgtctgattccaaaatc
aaagataccccaagtgactcaaaatgttcagtgaaatcaaattgcgatcaagctggtgga
ggagaagaatctgttcatgaacctcaaagaaacaaaactgtgaaacaagaaaatgagaac
caagacaaacaacagtgtttcaagttgttacatccagtggcaggcattcatgcagcgttg
cttgaaagaaaagctcgacgtcaagcactatttagcagttccggcccttacaagcgagca
ctttcagctcgaagggacttggcaatcagacgccagctttgcaatttacctcctcgggaa
acaacatgtgataataatcctgctgctgatgaactctttcgccttagtttgcaattgctg
gagcgggcctcctga
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