Thrips palmi (melon thrips): 117642686
Help
Entry
117642686 CDS
T08251
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117642686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117642686
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117642686
mRNA degradation factors
5'-3' decay
Decapping complex
117642686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
DUF3287
ISP_coupler
Motif
Other DBs
NCBI-GeneID:
117642686
NCBI-ProteinID:
XP_034237006
UniProt:
A0A6P8YJX4
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MLYSFPIPVCVRFESGWASRTSSEKIAGPEKAIMTPSDARQIVQFQGSDDQHSTEIVSSD
VVIIPSAGNHDKSSSHVKTNNIVDHSWDVRFYKGQLLAVHLSGKFIAFGIQVVSKSESMV
RIVNRQNNHRYLCKGITGVVQDISFAHIASQVVLGIVDEAGTLFVYRIEDTLNALQTKLI
LHVSQNIDPKPTGLIHRLVWCPFIPEDDGDTSNPEDEEVANMLVVTHGPKAQIWNVEMVT
KKYGTDKELRPDDIKEGMLSLNHHELDIVDVAFSPDGTALATASLDGYVKFFQVYMQGSE
EPRCLHMWQPHDGKPLSSLFFLDNHRSHSAAADTQFWKYVVTGSDNNSELKIWSCETWSC
LQTICFASNRSSPLPGTISLKAGIDLSGDFIMLSDINNRVLYVLQLEKDVQTDLARVCAV
SEFLLPNPILSFGIVDAGIRSVKSHHDVTSNLETALMDNNDEDNDDAGEEDDEEKSLKVV
VRMYVVHPKSLRGCIISFDPPEEAKKTMSIFSEDTLGKESPGGFSPQLFKAFAEGLSDVS
ENCKEKIISNQSSVTSTLALAVTDSTNNVTPLPELRQSSEPKCLSNLMTPDDFSSSNEKS
DTDGTQKSPLLPVSEHLGQLPAEKSKKQAESSSKLEAANLRALKTKGKSNGKAMSDTCLT
RKREPTASGGSSPSREVEEILSHGSSDGILFNFPNSGVPEDPSIIKVETSIGSIPGPIPI
PVTESNIILPAMSAPQLPLSLPTPLQATSIASTTSALQAVVAAAQEKQPVMVSAEQLEKQ
QTTWSRVDLLLETLQQQQVEIKSLRQEVSALRLSQTAPVEPHFGDKIQGLLLAQQKQLEM
SIQNAIQNALQNSVQNLLRARDQQENQRQEALMSVISQSISNIITTQLPVLISQEIQSEV
VPVVRSHVQQMKQQVATEVATKLAATDQLMKDNLAKLVTNKSFVDMLNQSLLVMAQPALQ
SLYKESFGTLVPGMEKVTQSMFHQINNSFSKGTQEYMQYVDGTVEKQRRQTDRAQEMLIQ
LQSVAESMQVAHEQQTLLLNNTLENQLQRLQNSLHDKLSKSISETVKGNLAQGFKQQKAV
IEESVLTSLTAVRSRAVSPAHSVSDYASMERRILNCIQERDFNSAFQQALSASSIALVLT
VCERVDPQELFSSQPFPLKQNVLLSLIQQLSIDLNDHTELKRRYLEEAVMGLDANDADVR
KHMYIISKLQEQLMAYVNAHPGSGLSRQMKMLYMATSNLVHSPTSP
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgttatacagcttccctattccagtttgtgtacggtttgaatctggctgggcatcacgt
acctcgtcggagaaaatcgccggaccagagaaagccatcatgacaccatcagatgcaagg
cagattgtccaatttcaagggagtgatgatcagcacagcacagaaattgtcagctctgat
gtagttatcattcccagtgctggaaatcacgataaaagcagctctcatgttaagaccaac
aatattgtagatcacagctgggatgtccgattttacaaaggacagctcctagcggtccat
ctttcggggaagtttattgcatttggcattcaagttgtttccaaaagtgaaagcatggtg
cgaatcgtcaaccgtcaaaataaccatcgatacctttgcaaaggtatcactggagttgtt
caggatatttcgtttgctcacatagcgtcccaagttgttcttggaattgttgatgaagct
ggaaccctgtttgtgtaccgaattgaagacacgctgaatgcactacaaaccaagttaatt
ttacatgtgtctcaaaatattgatcctaagccaacaggcttgattcatcgtctagtttgg
tgtccattcatacctgaagatgatggggacacctcaaatccagaggatgaagaagtggca
aacatgctagtcgtgactcatggtcccaaggcgcaaatatggaatgtagaaatggtgact
aagaagtatggaacagataaagaacttcgtcctgatgacattaaggagggaatgctctcc
ttgaaccaccatgagctagacattgttgatgttgcattttcacctgatggtactgcttta
gcaacagccagcttggatggatatgttaaatttttccaggtctacatgcaaggctcagaa
gagcctcgttgtcttcatatgtggcaaccacatgatggaaaaccactgtcgtcgctattt
ttccttgataaccatcgatctcactcagcagctgcagacactcaattttggaagtatgtt
gtgactggatcagataataattctgaactaaaaatttggtcatgcgagacctggtcctgc
ctacagactatatgttttgcttctaatcgatcttcacccttaccgggaactatcagtttg
aaagctggtattgatctgtctggtgactttataatgctctctgatattaacaatagggtt
ctatatgtccttcaacttgaaaaagatgtgcagacagatttagcacgagtttgcgctgtt
tctgagtttcttttgcccaatccaatccttagttttggaattgtcgatgctgggattcga
agcgtaaaaagtcatcatgatgttacaagcaatttggagacagccctcatggataacaat
gatgaggacaatgatgatgcaggggaagaagacgatgaagagaagtcactgaaagtggtt
gtcagaatgtatgttgtgcaccctaaatctctgagaggctgcattatttcatttgatcct
cccgaagaagccaagaagacaatgagcatattttcagaagatactctagggaaggaatct
cctggtgggttttcacctcagttattcaaagcctttgcagaaggactctctgacgtctcc
gaaaactgcaaggagaagatcattagcaatcaaagctctgtgacatcgactttggctttg
gcagttacagatagtactaataatgtgacaccattgcccgaacttcgtcaatcttcagaa
cccaagtgcctaagtaatctgatgactcctgacgattttagttcttcaaatgaaaaaagc
gatacagatggcacacagaagagtcctctgttgccagtgagcgagcacttaggtcaacta
cctgctgagaaatccaaaaagcaagctgaatcttcatccaaacttgaagctgcaaatctg
agagctttgaagacgaaaggaaaaagcaatggaaaagccatgtctgacacttgcctcaca
aggaagcgagagcccacagcaagtggtggaagcagtcctagtcgagaagttgaggaaatt
ttgtctcatggtagctctgatgggatacttttcaactttccaaattcaggtgttcctgaa
gacccttcaattatcaaggttgaaaccagtattgggtcaataccggggcccatccctatt
ccagtaactgaatcgaacattatccttcctgccatgtcggcaccacagttgcccttgtct
ctgcctaccccgttacaagcaacatccattgctagtactactagtgctcttcaagcagtt
gttgctgcagcacaagagaagcaaccagtaatggtcagtgctgagcagcttgagaagcaa
cagacaacatggagcagagttgacttgcttctagaaactctccaacagcagcaagttgaa
atcaagagtttaagacaagaagtcagtgcactgcggcttagtcagactgcacctgttgaa
cctcactttggcgataaaatacaaggtcttcttctggctcaacaaaagcaattggaaatg
agcatccagaatgctattcagaatgctctccaaaattctgtccaaaatctactgcgcgct
agggatcaacaggagaaccagcgacaagaagctttaatgtcagtgatatcccagtccatt
agtaatataataactactcaactccctgtactcatatctcaagaaatacaatctgaggtt
gtgccagttgttagaagccatgtacaacaaatgaagcagcaagtggccactgaggttgcc
accaaacttgcagctacagaccaactgatgaaagataacttggctaagttggttactaat
aagtcttttgtggatatgcttaaccaatccttacttgtgatggctcagcctgcacttcaa
agtctttacaaagaatcatttggtactttagtccctggtatggaaaaggttactcagagc
atgtttcatcagataaataattctttctccaaaggaactcaagaatacatgcagtatgtt
gatggaactgtagaaaagcagcgcagacaaactgatagagcccaagaaatgctgattcag
ctccagtctgtcgccgaatctatgcaggttgctcatgaacaacaaacattattgcttaac
aatactcttgaaaatcaactacaaaggcttcaaaatagtcttcatgataaattaagcaag
agtatcagtgagactgttaaaggaaatcttgctcaaggattcaagcaacagaaggcagtc
attgaggagagtgttttgacaagtcttacagctgtgcgttctcgtgctgttagccctgcg
cactcggtcagtgactatgcgagtatggaaagacggatactaaattgcatccaggaaaga
gattttaattcagctttccagcaggctttatcagcatcaagtattgcacttgttctcacc
gtctgtgaacgggttgacccacaagagttgttctctagtcagccattccccttgaaacaa
aatgttctgttatcattgattcagcagctttccattgacctgaacgatcatacagagctg
aaaaggaggtacttggaagaggctgtaatgggtttagatgctaatgatgctgatgtacgt
aagcatatgtatatcataagcaaactgcaggaacaattgatggcatacgtaaatgctcat
cctgggtctggcttgagtcgacaaatgaaaatgttgtacatggctacttcaaatttggtt
cattcaccaacttcgccttaa
DBGET
integrated database retrieval system
