Thrips palmi (melon thrips): 117642694
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Entry
117642694 CDS
T08251
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpal03036
]
117642694
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117642694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DUF5844
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117642694
NCBI-ProteinID:
XP_034237024
UniProt:
A0A6P8YJ05
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MQPTFLSSSGVSKKKGYKDEVSDSPSDSDSDFDEDEDPDKIEVPGGGKDLVTAVSTVSAH
KDGPAIIKKEDPDLMSSTSASSNAGIPKLGSAQGVMPPALKGGTSLLKSENPVPFMGNPN
EIKIKRDVPMKMGNFPTMPGIKAPGGLVTKGNTLGFETIRPAGAPNMSHINAMSSIFPGV
MQGVAGNASGGNNIPPGLSGMLNTPFFQSMDLSAFANMANMMGVDMGNVTAPYATVMANM
MSNPFMNHIMSPMMQQNWNPALAGKNMMWMNEQKMGVPEEEEVEDEDMGVAETYSDYMPT
KLKLGKKHPDPVVETASLSSVEPADVWYKLSLPDETVKSGSLSALQLEAIVYASQQHEHF
LPDGNRAGFLVGDGAGVGKGRTIAGLIYENYLKGRTKAIWVSVSNDLKYDSERDLKDIGA
REVQVHPLNKFKYAKISSSANGNVKEGVVFSTYSALIGESSQASGKYKTRLKQLIDWCGE
DFDGCIIFDECHRAKNLCPTGSSKPTKTGLTVLEIQNQLPKARVVYASATGASEPRNMAY
MTRLGIWGAGTAFKDFNEYINAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVSFKIEE
VTLSDEFIKVYDDSVKLWVKAMQKFTEAAELIDAESRMKKTMWGQFWSSHQRFFKYLCIA
AKVKFAVSVAREAVKCGKCVVIGLQSTGEARTLEQIERDDGELSDFVSTAKGVLQTLVEK
HFPAPDRSRILRLLGLSPPRKDKKSKKSDDDDEAGGSSGKRKPVRRAAQRASKRVKVESS
DSGSDNESGSDAEFHLSGSEAPSESNSEASDVSSDFNPFHSDSDSDADPWVGGRGKKKGK
KGKPAKKPASTQDKISQLIEQKQSAHKKAKREENRNGNSMGVGLAPPPRDAIEHACTMKE
ELLSEIEELGDRLPPNTLDQLIDELGGPENVAEMTGRKGRVVQTDGGIQYESRSEVDVPL
ETLNLTEKQRFMDGEKDVAIISEAASSGISLQSDRRALNQRRRVHITLELPWSADRAIQQ
FGRTHRSNQVNAPEYLFLISDLAGERRFASIVAKRLESLGALTHGDRRATETRDLSRFNI
DNKYGRQALEATMKAIMGYEQPRVPPPQDYKGEFFKDVADALVGVGLITNSENMPGILML
DKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLQAIISDAKKTGRFDLGILDLGASGENV
KRIKVYKFQRKHATGTAATQLHIVHVERGMSWAEVTEKYQELVGGKEGFYLSHQVRNSKQ
TAIMAVAVEPNPSSKKKGKEKDTLYMVYRPNTGLQLKQETLGELEKKYKKVSKDEAEPHW
TQQYDSSEKTCSHAYWRGNCKNVAMGMECEIGLRRRTYNVLAGCVLSVWTKVEDLLNSRT
GHNSKMQVVRLRSSDGLKIVGTLIPNSCVEDLIEALEEDSEKMEEEKF
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccacatttctatcatcatcaggggtttccaagaagaaagggtacaaggatgaa
gtcagcgatagcccatctgattctgatagtgattttgatgaagatgaggatcctgacaag
attgaagtgccaggtgggggaaaagatcttgttaccgcagtctctacagttagtgctcat
aaagatgggccagccatcatcaaaaaagaagatccagatctgatgtcttcgacttcggca
tctagcaatgcagggattcctaagttggggtcagcccagggggtcatgccacctgccctc
aaaggtggcacctccctattgaaaagtgagaatcctgtaccattcatgggaaatcccaat
gaaataaaaatcaagagagatgttcctatgaaaatggggaactttccaacaatgcctggt
atcaaagccccagggggccttgttactaaaggcaacacacttggctttgaaactattcgg
ccagcaggggcaccaaatatgtctcatattaatgcaatgagcagtatttttcctggtgta
atgcaaggagttgctggtaatgcaagtggaggtaataacattcctcctggtctcagtgga
atgctcaacactccctttttccaatccatggatttaagtgccttcgcaaacatggcaaac
atgatgggggtcgatatgggaaacgtaactgctccatatgcaacagttatggccaatatg
atgtcaaatccgtttatgaatcatatcatgtcaccaatgatgcaacaaaactggaatcca
gcacttgctggaaagaatatgatgtggatgaacgaacaaaagatgggtgtccctgaagag
gaggaagttgaagacgaggatatgggtgtagcagaaacctattctgactacatgcctact
aaattgaaattgggaaagaagcacccagatcctgttgtagaaacagcctctttgtcgagt
gtagaaccagcagatgtttggtacaaactttctctgcctgacgaaactgttaaatcagga
tctttgtctgcacttcaattagaagccattgtgtatgctagccaacagcatgagcacttt
ttacctgatggcaatagagcaggattcctcgttggtgacggagctggcgtgggcaaaggc
agaactatcgctggtctcatatacgagaattatttaaagggtcggacaaaggctatttgg
gtgtcagtttctaatgatttgaagtatgattctgagcgagacttaaaagatattggtgcc
agagaagttcaagtccatcccctaaataagtttaaatatgccaagatctcatctagtgct
aatggaaatgtaaaggagggagtggtgttctctacatactctgccctcattggtgaatcg
tcacaagccagtgggaaatataaaacaagattgaagcaacttatcgactggtgtggagaa
gattttgatggatgtatcatttttgatgaatgtcaccgtgccaaaaatttgtgtcctact
ggctcaagtaaacccaccaaaactggcttaacagtattagaaattcaaaaccaactaccc
aaagctagagtggtatatgcatcagctacaggtgcatcagaaccaagaaacatggcctac
atgactcgtcttggtatttggggtgctggaactgcattcaaagatttcaatgagtacatt
aatgcagtagaaaagaggggtgtgggtgctatggagattgttgcaatggatatgaaactc
agagggatgtacattgctcgtcagctgagtttccacggtgtctctttcaaaatagaggaa
gtcactctttctgatgagtttatcaaagtctatgatgattctgtcaagttgtgggtcaaa
gctatgcagaagttcactgaagctgccgagcttattgatgctgaaagcaggatgaagaag
acaatgtggggccagttctggtcttctcaccaacgctttttcaagtatttgtgtattgca
gctaaggtcaaatttgcagtatcagttgcacgggaggctgttaagtgtggcaagtgtgtc
gtgattggtcttcagtctactggtgaagcaagaacccttgagcaaattgaaagagacgat
ggtgaactttcagactttgtttccactgcaaagggggttcttcagacacttgttgaaaaa
catttccccgccccagaccgtagcagaattctacgtcttttgggcttgtctcctcccaga
aaagacaagaagtcaaagaaatcagatgatgatgatgaggcgggaggctcaagtggcaaa
agaaagcctgttaggagggctgcccagcgtgcatccaagagagtcaaagttgaatcttct
gattctggttctgacaatgagagtggttcagatgctgagttccatctgtcaggatctgag
gcacctagtgaaagtaactctgaggccagtgatgtatccagtgactttaatccgttccat
agtgatagtgattctgatgcagacccttgggttggtggaagaggtaagaagaaaggtaag
aagggaaaacctgcaaagaaacctgcttccactcaagacaaaatcagccaactcattgag
cagaaacagtcagcccataagaaggctaaacgtgaggagaaccgcaacggcaattctatg
ggtgttggcttagcgccacctccacgagatgcaattgaacatgcatgcactatgaaggaa
gagctcctctcagaaatagaagaattgggtgatcgtttgccccccaacacattagatcaa
cttattgatgaacttgggggacctgaaaatgtggccgagatgactgggcgcaaaggacgt
gttgtccaaactgatggtggaatccagtatgaatcaaggtctgaagttgatgtacctctt
gaaaccttaaatctgacagagaaacagaggtttatggatggagaaaaggatgttgctatt
atatctgaagcagcaagtagtggtatttccttacaaagtgatcggagagctcttaatcag
cgcaggagagttcacataacacttgaattaccgtggagtgctgatagagccatccagcag
tttgggcgcactcatcgtagtaaccaagttaatgccccagaatatttgttccttatttct
gatttggcgggagaaaggagatttgcatcaattgttgccaaacgattagaaagtttgggt
gcattgactcatggagacagacgagcaactgaaacaagagatctatctcgatttaatatt
gacaacaaatatgggagacaagctttggaagccactatgaaggctatcatgggctacgaa
cagcctcgagttccccctcctcaagactataaaggagaatttttcaaagatgtagcggat
gctttggttggtgttggtttgattaccaacagcgaaaatatgccaggtatcctcatgtta
gacaaagactacaacaacatgagcaaattccttaataggattctaggtatgccagttgat
ttgcagaaccgattgttcaagtattttaccgatacactgcaagccataatttctgatgct
aaaaagaccggtcgttttgatctgggcatcttggaccttggtgcctctggggagaatgtg
aaacgaattaaagtgtacaaattccagcgaaagcatgccactggtactgctgccactcag
cttcacattgtgcatgtggagcgtggcatgtcttgggctgaagttactgaaaagtatcag
gagttagttggaggaaaagagggcttctatctttctcatcaggtgcgcaattccaaacaa
actgccatcatggctgttgctgtggagccaaatcctagctctaagaagaaaggaaaggaa
aaagacactttgtacatggtctaccgaccaaatacaggtcttcagttgaaacaggaaacg
ttaggagaacttgagaaaaaatacaagaaagtgtccaaggatgaggctgaacctcactgg
actcaacagtatgattcttctgagaagacatgctcccacgcttattggcgaggcaactgc
aaaaatgttgctatgggtatggaatgtgaaattggtttacgacgtcgaacatacaatgtt
ttagcaggatgtgtgttaagtgtatggaccaaagtagaagatctccttaacagtagaaca
ggacataacagtaaaatgcaggttgtacgcctgcgttccagtgatggtttgaaaattgtt
ggaacactgattcctaatagttgtgttgaagatctgatagaagcgcttgaagaagactcc
gagaagatggaagaagagaaattttga
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