Thrips palmi (melon thrips): 117642882
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Entry
117642882 CDS
T08251
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03082
ATP-dependent chromatin remodeling
tpal03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117642882
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117642882
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpal01009
]
117642882
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpal03021
]
117642882
03036 Chromosome and associated proteins [BR:
tpal03036
]
117642882
Protein phosphatases and associated proteins [BR:
tpal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117642882
Transcription machinery [BR:
tpal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117642882
SWI/SNF complex
117642882
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117642882
PBAF complex
117642882
SWI/SNF complex
117642882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
117642882
NCBI-ProteinID:
XP_034237390
UniProt:
A0A6P8YK36
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MAIRTYGDKPLSFQLEENGEYYCIGSEVGNYLRLFRGSLYKKYPGMFRRAINNDERKKLL
ELGLSQHCLASSVSLLKASEVEDIIEGNDEKYKAVSVHSEPPAPREVKPKKSVPWVPSVP
NSSHLDAVPQATPINRNRVNLKKVRTFPLCFDDTDPSVIVENASQVETLVPIRLDMEIEG
QKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPITFIPAIAQAIRGQVDSFPSEGTTLEE
SQDQRVIVKLNIHVGNTSLVDQVEWDMTEKENNPETFAMKLCAELGLGGEFVTAIAYSIR
GQLAWHQRTYAFSETPLPTVEVPFRPPSESDQWAPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcggacgtacggcgacaagcctcttagctttcagctcgaagaaaatggagaa
tactactgtattgggtcggaggtgggaaactaccttcggctgttccgaggttctctctat
aagaagtaccctggcatgttcaggagagccatcaacaatgacgaacggaagaaactactt
gagctagggttaagtcaacactgtcttgcatcgagtgtgtccttgctgaaagcttctgaa
gtagaagatattatagaaggcaatgatgaaaaatataaagcagtttctgtacattcagag
cctcctgctcccagggaagtcaaacctaagaagagtgtgccatgggttccatctgtgccc
aacagttctcacttagatgctgtgccgcaagccactccaattaatcggaatcgtgtcaat
ctgaagaaagtgcgcaccttccccctctgttttgatgacactgatccaagtgtcatagtt
gaaaatgccagtcaagttgagactttggtcccaattcgtttggatatggaaattgaagga
caaaagttacgtgacacatttacatggaacaaaaatgaaactctgattactccagagcag
tttgcagaagttctttgtgatgacctggatctgaacccaatcacctttattcctgcaatt
gctcaagccattcgcgggcaggtagacagttttcccagtgaaggcactacactcgaagag
agtcaagatcaaagagttattgttaagctgaacattcatgttggcaatacatctctagta
gaccaagttgaatgggacatgacagagaaggaaaacaatccagaaacttttgccatgaag
ttatgtgcagaattaggcctaggcggtgaatttgtgactgctattgcttacagtattaga
ggtcaattggcatggcaccaacgtacctatgcgttcagtgaaactccccttcctaccgtg
gaagttcccttcagaccgccatcagaatccgatcaatgggccccattccttgaaaccttg
acagatgctgaaatggaaaagaaaatacgagatcaagacaggaatacaaggcgtatgcgg
cggttggcaaacaccactcctggctggtga
DBGET
integrated database retrieval system
