Thrips palmi (melon thrips): 117643074
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Entry
117643074 CDS
T08251
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117643074
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117643074
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
90S particles
Helicases
117643074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ATPase
AAA_19
nSTAND3
ResIII
AAA_30
AAA_16
FtsK_SpoIIIE
tRNA-synt_His
DUF2857
AAA_23
Motif
Other DBs
NCBI-GeneID:
117643074
NCBI-ProteinID:
XP_034237620
UniProt:
A0A6P8YKQ6
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MAESCWCDLHVCFVQLILFLEQKTPVSSKMGKAEKKYNWKARQVKNTVIDNAETSKIKLD
IDTQGKETYDAANPLVIPSQKRKTQLVKNAGTITKVLSRKQRKRLEKIVDKKKKKENRSQ
LLQALSEVQANPETMKELTSIAAVQTKGRRKIFLEQEASTDPRDNLKRSADEIQGDSRSS
LNSISGSKRRKALLKAGLWRPEEEKKASNNLNVIGFEESSSDESSEAEEEEMKEDPEDDD
ENGQVEDDEGAEEIPDDIMTEAKDSEDSEKNQEAPDLNGTSKIEDCKIKTETDKECPNEE
DESNKKSLAPKMKSIPSKPAIFVPVNRSPAIQEARMKLPVLAEEQAIMEAISENPVVLIA
GETGSGKTTQVPQFLYEAGYARDGKLIGVTEPRRVAAISMARRVGEELDLTSKEVSYLIR
FEGNVTDDTKIKFMTDGVLLKEIQNDFLLTKYSVIILDEAHERSVYTDILIGLLSRIVPL
RLKRGNPLKLIIMSATLRLEDFIENPRLFRITPPVIKVETRQFPVTIHFNKRTNPDYCLE
AFRKVCKIHAQLPDGGILVFLTGQREVNTLVRKLKTAFPLKGRNLKKVLKEKSERAVPKG
NNTEEDNEEEVELDMERAIQKARKHMKQKHQMALPSVNLDEYDVIPDDTESDLFGDDFDE
NSDDEGLDDAEVLQKTTTQPMWVLPLYSILPTHEQARVFQPPPEGCRLCVVATNVAETSL
TIPNVKYVVDSGKWKSRMYDKVTGISSFDVDWCSKASANQRAGRAGRTGPGHCYRLYSSA
VFNDTFPLYTTPEIQRKPVDDLVLQMKAMSIHKVVNFPFPTPPDLIQLKIAERRLRLLGA
LSALKPGTEDDFSGKLTPLGQSISLFPVSPRFGKMLALSQQHDLLALTVCLVAALSVQEV
LLEVSLTSGANEKEGSTQQKWRQMRRKWSGFGNSKLLGDPMILLRAVGAAEYAAEQGDLM
GFCTNNGLRHKAIVEIRKLRVQLTNEVNLNVPNLNLGVDPNMPPPSDIQSKLLRQMMLSG
LVDQVARRVDLDELKEGEDKRKWKHAYQIPEMESPVFLHSASVLRKDLPQWVVYQEIYET
NKTYMRGVTAIEPEWLPVFAPALCNVSEPMMEPPPRYESETDRLLCHMSSTFGRSGWPLP
IMELEFPPSLNRYKWFARFLLEGSVFPKLATFSKILLSTPATMVKTWANLQPRTEFLLKA
LVSKECDSAEKVRGVWKKEPHYLLDAYKQWLPESAQHKAVEVWPPL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatcatgttggtgtgatctccatgtgtgttttgtgcagttgatactttttctt
gaacagaaaacacctgtgagttctaaaatggggaaggccgaaaagaaatataattggaag
gctcgccaagtcaaaaatacagtcattgacaatgcagaaacgtcaaagatcaagcttgac
attgacactcaaggaaaagagacatacgatgcagcaaaccctttagtaataccctcccag
aagcgcaagacacagttggtaaaaaatgcgggcacaattacgaaagtcctctccaggaag
cagaggaaacgcttggaaaagattgttgacaaaaagaagaagaaagaaaacaggtcacag
ttactgcaagctttatcggaagttcaagcaaatcctgagacaatgaaagaacttacctca
attgcagctgttcaaaccaaagggcgtagaaagatatttcttgaacaagaggcctcaact
gatcctcgtgacaatttaaaacggtcagctgatgaaattcaaggagattcaaggagttct
cttaacagtatatcaggtagcaaaagaagaaaagctcttctgaaagctggtctttggaga
ccagaagaggaaaaaaaggcctccaataatttgaacgtcattggctttgaggaatcctcc
agtgatgaatctagtgaggctgaagaagaagagatgaaggaagacccagaagatgatgat
gaaaatgggcaggttgaagatgatgagggtgcagaagaaattcctgatgatattatgaca
gaagctaaagatagtgaagattcggaaaaaaatcaagaagcacctgatcttaatggaacc
tcaaaaattgaagattgcaagataaagacagaaacagacaaagaatgtccaaatgaagaa
gatgagtccaacaaaaagagcttagcccctaaaatgaaatcaataccttcaaaaccagca
atatttgtaccggtaaacaggagccctgcaattcaggaggcaagaatgaagttacccgtt
ctggcagaggagcaggcaattatggaggcaatctctgaaaatcccgtggtcctcattgca
ggagaaacaggcagtggaaaaactactcaggtcccccaattcttgtatgaagctggatat
gccagggatggcaagctaattggtgtcacagaacctagacgtgtggcagccatatcaatg
gccaggagagtaggcgaagaacttgatttaacttctaaggaggtttcataccttatcagg
tttgaaggaaacgttaccgatgataccaagatcaaatttatgactgatggtgttctgtta
aaagaaattcaaaatgatttccttttaaccaagtactcggttatcatacttgacgaagct
catgaaaggagtgtttacactgatattctaataggtcttctctcacgcatagttccattg
cgtctcaaaaggggtaaccctctcaagcttataataatgtcggccactttgcgcctggaa
gactttattgagaacccacgcctcttcagaataactcctcctgtcataaaggttgaaact
cgccagtttcctgtaactattcattttaataaacgtaccaatcctgattactgccttgaa
gcattcaggaaggtatgcaaaattcatgcacagcttcctgatggtggcatcctagtgttt
cttactggccaacgggaagtaaatacattggttcggaaattgaaaaccgcattccccctt
aaaggtagaaatttaaaaaaggttttaaaagaaaaatctgaaagggcagtacccaaagga
aataatactgaagaagacaatgaggaggaagtagaacttgatatggaaagagctattcag
aaagcaaggaaacacatgaaacagaaacatcaaatggctcttccatcagtcaacttagat
gaatatgatgtgatacctgatgacacagagtctgatctatttggtgatgactttgatgaa
aattctgatgatgaggggctagatgatgcagaagtgctacaaaaaaccactactcaacct
atgtgggtgctccctctttactccattttgcctactcatgaacaagctagggttttccaa
ccaccaccagaaggttgccggctgtgtgttgttgccaccaatgtagctgaaacctctctg
actatacccaatgttaagtatgttgttgatagtggcaagtggaagtcacgaatgtatgac
aaagtcacaggaatttcatcatttgatgtagattggtgtagcaaggcatcagccaaccag
agggcaggtcgtgctggtagaactggaccaggccactgttacagattgtattcatcagct
gtttttaatgatacatttcctttatacacaactcctgaaattcaaagaaaaccagttgat
gatttagttctgcagatgaaagccatgagcatccataaagttgtgaatttccctttcccc
actcctcctgatcttatacagcttaaaattgctgagcgtagactaagactgttaggtgca
ttgtctgctctgaaaccaggaactgaagatgacttttccggaaagctcacacctttgggg
cagtctatttcactttttccggtttccccaaggtttggtaaaatgttagctcttagccaa
caacatgacctattggcacttacagtatgccttgtggctgccttgtcggtgcaagaagtg
ttattagaggtgtcacttacatccggtgccaatgagaaagaaggcagtactcagcagaaa
tggcgtcaaatgcgaaggaagtggtctggatttggcaactcaaaattgttaggtgatcca
atgattctactgcgtgcagttggggctgctgagtatgcagcagagcaaggggatttgatg
ggtttctgcacaaataatggtttgcggcacaaggctattgtagaaatcagaaaattgaga
gttcaattaaccaatgaagttaatcttaatgtacccaatctgaaccttggggttgatcct
aatatgccgcccccatcagatatacagtcaaaattactgcggcagatgatgttgagcggg
cttgtggaccaagtagctagaagggttgatctagatgaattaaaggagggtgaagataaa
cgtaagtggaaacatgcataccaaatcccagagatggaaagtcctgttttcctgcattct
gcatcagtccttcggaaagatctgccacaatgggttgtttaccaagagatctatgaaact
aacaagacatacatgagaggtgtaacagccattgaaccagagtggctacctgtatttgct
cctgccttgtgtaatgtttcggagccaatgatggaacctcctccaagatatgaatcagaa
actgatagacttctttgccatatgtcatctacatttggaagatcggggtggccacttcct
atcatggaattagaattcccaccatctcttaataggtacaaatggtttgcaagattccta
ctagaaggttcagttttcccaaaactggctacattctccaaaattcttttatctacacca
gctactatggtgaaaacttgggcaaatttacaacctcgtactgaatttctcttgaaagcc
cttgtttctaaggagtgtgactctgctgaaaaagttcgtggtgtgtggaagaaggagcct
cattatcttttagacgcgtacaagcagtggctcccagaatctgctcaacacaaagctgtg
gaagtttggccaccattgtaa
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