Thrips palmi (melon thrips): 117643265
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Entry
117643265 CDS
T08251
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117643265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117643265
Enzymes [BR:
tpal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117643265
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
HECT type E3
117643265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
117643265
NCBI-ProteinID:
XP_034237926
UniProt:
A0A6P8YM56
LinkDB
All DBs
Position
Unknown
AA seq
2265 aa
AA seq
DB search
MAEQPNSVFGGSESLTTVLGVTNTARSRRKSSRKRPSSGGSSSSSPDRWTSRPKRGRQGR
QGRQDKEAGSAGTRAGSSRAASSWAASSASASATSASSAAAASGSGSGSAGSVTTTAPSA
PAAGRGRSRATRRKDSNSSVSVAQSSSVEVNPPDTSVAGSSGNVSSTTASKSKSSESSRS
RGGSKASSSKAVDLGELTSSVDSGCQSKGTSRSRRSAQSSRAAAKPKPTATATETSTSKS
RKPKAKESSSRSRSRNSEQAQDTAGPSTSLSRNSHLADTSSSTRSSTSKAAASAAKSNQR
GVRKRELAPEPSGSGSGRKYTLRSGGGKAAAASASPPSNRAVPRKRAKVGIDSTKNLGTS
HATGVRREEAEAAGSAAVDGNGSSGSGPVLRRSTRSQANTGSCASTSRRTSRSGKLPLPS
SATSNTAEGMSSGQGHHDAASGSQNGVAAGDETAKGASGSSSTAPSAAAGGPSGLTGTAV
DSEGDDSEVGRLQALLEARGLPPHLLGALGPRMQHLLHRSMGANSAASKAQQQLTGLQAV
GDEGQQLQAVIEMCQMLVMGNEDTLAGFPVKQVVPALIALLTMDHNFDIMNHACRALTYM
MEALPRSSAAVVEAVPVFLEKLQVIQCMDVAEQSLTALEMLSRRHSKSILQHRGVAACLM
YLDFFSINAQRAALCVTANCCQNLHPDEFHYVSQSLPLLAGRLVQQDKKSVESVCLAYSR
LVDSFQHMPEKLQEIASPELLTNLQQLLVVSPPVISTGTFITVLRMLSIMCANCPDLALT
LLRQNIAETLLYLLTGSAEITNEEVELVTRSPQELYEITCLICELMPRLPSDGIFSVDAL
LDRPQGQVQDTVQWQWKDDRGLWHAYSSIDSRIIEAAHLSGEDEISLTMLGRTYTLDLHS
MQQINEDTGTTRPVQRRLSPPTLCSSPVAVANAPASPDDQSASSDGIETPGSNSPNNFSA
SYDARVACMKEERGLAASFIRSLFSVLYEVYSSSAGPSVRVKCLRALLRMVYYASADLLK
DVLKNQVVSSHIAGMMASQDLRIVVGALQMADILMTKLPHVFGTHFTREGVMHQVRLLAD
SSVPLGASPPKSALCAPSPLQPKSITCNLPAELFTSDQTIPLPPPSFSPLEGQQPGASTS
AAPSHASTSTSSYSMPILCTTNPSSLVPVSGSSSSLQAGPSASSSNGLLPFLDGGASLLL
GTSPPSGQMPRYDRTDPLLSSDDACSSSPSQLRLSDVLKRKRANQKRAVGPSSRKTRQDD
SSNLPSSMVHDLFTKVLSTATSLNNSGRSTPNSTSRSRFSGGSSKSFLANLNPARWGRSV
NPTLTDRAFKDIQLSKSSSNPNLTAGNKEKARIWVREQSNRFLDTHCLMESNGPSHPATD
ILTRLTQAIHKLHHQRDESLSALTELRGILLESDVSPFEVNHSGLIKALLQYLADEAANA
SGATTLSREHSQRLRCFLNVFAGCPLDPSWSGFPPDWNSTPFLALVNKLNGCVSQLEQFP
VKVHDLPAGTGTGRAGTSALKFFNTHQLKCNLQRHPDCQNLKQWKGGTVKIDPLALVQAI
ERYLVVRGYGRLRDKDAGDSDDENSEDDIDDTLAAVVISQGSARHKLQFMLGEHVLPYNM
TVYQAVRQFSPAAMNDQSETDTDTEAPLGNAGVWVQTHTIYYRPVPEDDPPTATIRPSAS
SSSSTVPSSTASTGRKGKGGNSKTRKKTDDLWNDGIAPSVQSALLPFLATQLPDSVTIQD
ASLPVLCLLRVLNALNRHWGTLYPFITYKAIIPQQDFVNSKVAAKASRQLQDPLVIMTGN
LPPWLQQIALTCPFLFPFETRQLLLYVTCFDRDRALQRLLDSSPELSGSDSQERVTPRLD
RRKRTVSRDDILKQAEQVFQDLATSRALVEIQYENEVGTGLGPTLEFYALVSRELQRSDL
DLWFGDKIPATDSTPSYIHSAVGLFPAPFGRATKVSHVAKVKSKFRFLGKLMAKAVMDSR
MLDLPLSEALYRWLLGQETTLSLPDLQHVNPPVHRTLVQLQGVLRTKETLEGSPDMTVQQ
IKEATGRLELDGCPIVELGLDMTLPGNTGIELRKGGKDVYVTPHNLDEYCKLVVHWFLVE
GVSRQIEALREGFETVFPLSHLRLFYPEELELIFCGSNQGSSQNAPWDVKMLMECCRLDH
GYTADSRAIGFLFEVLSSYTPHEQRQFLQFITGSPRLPVGGFKSLTPPLTIVRKTLEPNM
NPDDFLPSVMTCVNYLKLPDYTSVEVMRAKLKLAAQEGQLSFHLS
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcaacctaacagcgtattcggggggtcggaatctcttactacagttctaggg
gtgacaaacacggccaggagtaggcggaaaagtagtaggaagcggcccagttccggcggg
agctcgtcttcgtctcccgaccgttggacttcgcgacccaaacgaggccgccagggccgc
cagggccgccaggacaaggaggcaggctccgccggcacgcgggcagggagtagtcgcgcg
gcctccagctgggctgcaagctctgcctctgcctccgccaccagcgcgtcctccgcggcc
gctgcctcggggtcaggctcggggtcggcgggctccgtgaccactacggcgccctccgcc
ccggcggcaggacgaggtcgaagccgcgccacgcgaaggaaagacagtaactcgtccgtg
tctgtggcacagtcctcctctgtcgaggtcaatcctcctgacacctctgttgctggctcc
agtggtaacgtctcaagtacaacagcatctaaaagcaaaagtagcgaatccagtcgctct
aggggtggctcaaaagcaagttctagtaaagctgtagatttaggtgaactaactagctct
gtggatagtggatgtcaaagcaaaggtacctctcgttcaaggcgttctgctcaaagtagt
cgtgctgctgctaaacccaaacccactgctacagcgactgaaacttccacttccaagtcc
aggaaaccaaaggctaaggaatcaagcagtcgaagcaggtcacgcaattcagaacaagcc
caagacactgctggacctagtacttcactcagccgaaattcacacttagctgatacttca
agttcaacaagaagtagcacctctaaagcagctgcttcagctgcaaagagcaaccaaaga
ggagtccgaaagagggaacttgctccggaaccatctggttcaggttcgggtagaaagtac
acgctgcggagtggtggaggcaaggcggcggccgcctccgcctcgcccccgagcaatagg
gctgttcctcggaagagggctaaagttgggatagactcaaccaaaaatctgggtacctct
cacgcaaccggtgttaggagggaggaggcggaggccgcgggcagtgcggcagtagacggc
aacggcagcagtggcagtgggccggtgttaagacgcagcaccaggagtcaagccaacacg
gggtcctgtgccagcacaagtcggcggacatcccggtctgggaagctccccttaccctcg
agtgctacatcgaacactgcagaggggatgtcctcaggccagggtcatcacgatgcagcc
agtggttctcaaaacggagtggccgcaggggatgagacggccaaaggagcgtccggttca
agcagcactgcgccgtcggcagctgctggaggcccgtcgggcctgaccggcactgcagtg
gacagtgagggcgatgacagtgaagtgggacgtctccaggccctgctggaggccaggggc
ttgccacctcacctgctgggcgcattagggcctcgcatgcagcacttgcttcatcgcagc
atgggagccaactctgctgcttccaaagcacaacagcagctcactggccttcaagcagtt
ggtgatgagggccagcagctccaagctgttattgagatgtgccaaatgttggtgatgggc
aatgaagacacattggcaggtttccctgtgaaacaagtggtgccagctctcattgctctc
ttaactatggatcacaacttcgatattatgaaccatgcttgccgagcgctcacttatatg
atggaagctttgccacgatcatcagctgctgttgtggaagcagtaccagtgtttttagag
aaactccaagtaattcaatgcatggatgttgctgaacagtcgcttactgcccttgagatg
ttgtcaagacgtcacagtaaatcaattctacaacatagaggcgtggctgcatgccttatg
tatctagatttcttcagcatcaatgcccaaagagctgccctttgtgtgacggccaactgc
tgccaaaatctgcatccagatgaatttcactatgtatcacagtccttgccacttttagca
ggtcgccttgtgcagcaagataagaaaagtgtggaaagtgtttgtctagcttacagcaga
ttagtggacagttttcagcatatgccagagaaacttcaagaaatagccagtccagaactt
ctcaccaatttgcaacagttgcttgtggtatcaccacctgttataagcacaggaacattc
attacagtacttcgaatgttgtccattatgtgtgctaattgccccgacctggctttgaca
ctcttacgtcaaaatattgctgaaacacttctttacttactgactgggtctgctgaaata
accaatgaagaggttgaacttgtgaccaggagtcctcaggagttgtatgagataacatgt
ttaatttgtgagctgatgccccgattaccttctgatggtatattttctgttgatgccctg
cttgatcgtcctcaaggacaagtgcaagatacagtccagtggcaatggaaggatgatcgt
ggtctttggcatgcatacagtagcattgactctcgtatcattgaagctgcgcacttatct
ggtgaagatgaaataagtttaaccatgcttgggcgtacatacactcttgatttgcattcc
atgcaacaaataaatgaggacacaggaaccaccagacctgttcagcgtcgattgagtcca
cctacactctgcagctcgccagttgcagttgctaatgcccctgcttcacctgatgatcaa
agcgcttcttcagatggtattgaaactccgggttctaacagtccaaacaacttctctgca
agctatgatgcacgagtggcatgtatgaaggaagagcgtgggcttgctgcctctttcatt
cggtcgctgttcagtgttctctatgaagtatacagttcatctgctggcccgtctgttaga
gtcaaatgtctgcgagctttgttacggatggtatattacgcttctgctgatctattgaag
gatgtgctgaaaaatcaggttgtatcgagccatattgcaggaatgatggcatctcaagat
ttgcgaattgttgttggagctttgcaaatggcagatatcttgatgaccaagttaccgcat
gtgtttggtacccactttactcgtgaaggtgtcatgcatcaagtacggctgctcgcagac
agttcagttcccttgggggcgtctcctcctaaaagtgctttgtgtgctccttcacccttg
cagcccaaaagcataacatgcaatcttccagctgagctatttacatcagatcagacaatt
cctctgcccccaccatcattcagtccacttgaaggccagcagccaggagcttcaacttca
gctgcgccatctcatgcatcaacatcgacatccagctacagtatgccaatcctatgcaca
acaaatccaagcagtcttgtacctgtgagtggttcgtcatcatcactgcaagcgggacct
agtgcaagtagctcaaatggccttcttccattcctagacggaggagcaagccttctcctc
ggtacctctcccccctctggtcagatgcctcgttatgatcggacagatcctctcttgtct
tcagatgatgcttgttcatcaagcccttcacagctgcggctgagtgatgtcctgaaacgt
aaacgagctaaccaaaaaagggctgtgggtccatccagccgcaaaacccgtcaggatgac
agtagtaacttaccatcatcaatggttcatgatctttttaccaaagtcttgtctacagcc
acatctctaaataactcaggccggtccactccaaatagtacttcccgatcaagattcagt
ggagggtcatcaaagagttttcttgctaacctaaaccctgcccggtgggggcgaagcgtt
aatccaacattaactgatagagcattcaaggatattcaactatccaaatcttcctcgaac
cccaatctcactgccggaaataaggaaaaagctagaatatgggttcgtgaacagtctaac
cgcttcttagacacccattgccttatggaaagcaatggtcccagccaccctgccacagac
attctcactcgtctaactcaagctattcataagttgcatcatcagagagatgaaagttta
tcagcacttactgaattacggggcattttactggagtctgatgtttcaccttttgaagtg
aatcattcaggtcttatcaaagcattacttcagtacctggctgatgaagctgctaatgcc
tctggggctacaacactgagtcgtgagcactcccagcgtcttcgatgctttttgaatgtg
tttgctggatgtccgcttgatccaagctggagtggttttccacctgattggaactcaaca
cctttcttagcattagtaaataaacttaatggatgtgtgtctcagcttgaacagttccct
gtaaaggtccatgaccttcctgcagggactggaacaggtcgagcaggcacctctgccctc
aaattttttaacacccatcaattgaagtgcaatcttcaaaggcaccctgactgccaaaac
ttgaaacaatggaaggggggtacagtcaagattgaccccttagcattagtgcaagcaatt
gaacgttatttggttgtacgaggatatggtcgtctgagggacaaggatgcaggggattcc
gatgatgaaaacagtgaagatgatattgatgacaccttggctgcagtggtcattagtcaa
ggatctgcccgtcataaactgcagtttatgttaggagaacatgtcttgccctacaatatg
accgtttaccaagctgttcgtcagttcagtcctgcggctatgaatgatcaatctgaaaca
gatacagataccgaagcacctctaggaaatgctggagtttgggtgcaaactcacacaatt
tactatagacctgtcccagaagatgacccaccaacggccacaatacgtcctagtgccagc
tcttcctcttccactgtgcctagctccactgctagtaccggccggaaagggaaaggtggc
aactcaaagacacgcaagaagactgatgatttgtggaatgatggtattgcacccagtgtg
cagtctgccttgttgcctttcttggccactcagctgcctgactcagtcaccattcaggat
gcctcattgccagtcctgtgcctgctcagagttcttaacgctttaaatcgtcattggggc
actctctacccctttattacttacaaagccatcatcccgcaacaagactttgtcaacagt
aaagtggctgctaaagccagtcggcagcttcaagaccctctagttatcatgactggaaat
cttcctccatggttgcaacaaattgctcttacttgcccatttttgttccccttcgaaaca
agacagctgttgctgtatgtgacgtgcttcgaccgcgatcgagctctacaacgcttactt
gattctagtcctgagctaagtggttccgacagccaagaacgtgtaacccctcgtcttgat
cgacgcaagagaacagtgtccagggacgacattctcaagcaagctgaacaagtgttccag
gatcttgccacctctagagccctggttgaaattcaatatgagaatgaagttggcactggg
cttggaccaactttggagttctatgctcttgtatctagagagctccaaagatcagatcta
gatttgtggtttggtgataagattcctgcaacagactcaactcctagttacattcattct
gctgttgggttgttccctgcaccatttggccgtgcaaccaaggtttctcacgttgcaaag
gtcaagtccaaatttaggtttctgggtaaattaatggccaaggcagtcatggactcccgt
atgcttgatctgcctttgagtgaggccctgtatcgttggcttttgggacaagagactact
ttgagtttacctgatctgcaacatgttaatccaccagtgcaccgcactttagttcagtta
caaggagttctaagaacaaaagaaactttggagggaagtcctgatatgacggttcagcag
ataaaagaggctactggacgcttagaattagatggttgcccaattgtggaattaggcttg
gacatgactctccccggtaatactggcattgaattgagaaaaggtggcaaagatgtgtat
gttacacctcacaatttagatgaatattgcaagcttgttgtacattggttcttagtggaa
ggagtttcaagacaaatagaagctttaagagaaggatttgaaacagtcttccctctttct
cacctccgcttattttatccagaagagttagagttaattttctgtggttccaaccagggc
tcatctcaaaatgctccatgggatgtcaaaatgttaatggagtgctgccgtttggatcat
ggatatacagcagactctcgagcaataggtttcctgtttgaagtgctgagctcatacacc
cctcatgagcaacgtcaatttttgcagttcattacaggatcccctcgccttccagtagga
ggtttcaaaagcttaactccacctcttactattgtgaggaagactttagaaccaaatatg
aatccagatgacttcctgccatctgtgatgacttgcgtcaactacctcaagctaccagac
tatacatctgtggaagtgatgcgtgctaaactaaaacttgctgcacaggaagggcaactt
tcattccacctgtcatag
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integrated database retrieval system
