KEGG   Thrips palmi (melon thrips): 117643378
Entry
117643378         CDS       T08251                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03030  DNA replication
tpal03410  Base excision repair
tpal03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117643378
   03410 Base excision repair
    117643378
   03420 Nucleotide excision repair
    117643378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpal03032]
    117643378
   03400 DNA repair and recombination proteins [BR:tpal03400]
    117643378
Enzymes [BR:tpal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     117643378
DNA replication proteins [BR:tpal03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    117643378
DNA repair and recombination proteins [BR:tpal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      117643378
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 117643378
NCBI-ProteinID: XP_034238117
UniProt: A0A6P8YVF6
LinkDB
Position
Unknown
AA seq 2285 aa
MVLQNSGKYKPEKGGRGEKNFSGGPKEDNNESRLKQALENDAIDSKYGFKRVTDHQERAG
FLINMHTTEILDADKKLISAVDYYFIQDDGTRFKASLPYKPYFYILAKKENIQEVSAYIS
KKFAGHISSLEIVSKEDLDLPNHLIGLKQRYLKLSFLTVNDLMKVRPQIMSAVKKNKERE
KGNTYYSELLSKALATNSTGVTPKFTDHMENIIDIREYDVPYHIRVSIDNKIFCGSWYSV
CSRGAEAPFIVKRNDIIERPDMIVLAYDIETTKLPLKFPDAQSDQIMMISYMIDGQGYLI
TNREIISADVEDFEYTPKPEFEGFFTIFNEPDERALLLRFFEHIMDVKPHIFVTYNGDFF
DWPFVEARAAIHQLDMKQEIGFSKNKEGTYCCRSAMHMDCLCWVKRDSYLPVGSQNLKAV
AKAKLRYDPVEIDPEDMCAMAAEQPQVMSNYSVSDAVATYYLYMKYVHPFIFALCTIIPL
EPDEVLRKGSGTLCEALLMVEAFHANIIFPNKQESELNKLSEDGHVLDQETYVGGHVEAL
ESGVFRADIPCQFRIVPSACEKLLGNVEDALKHAIVEEEQIPLEMVTNFEEIADDIRVKL
QDLRDTPMRLETPIIYHLDVGAMYPNIILTNRLQPSAMVDEQTCAACDFNRPGAKCQRKM
AWMWRGEVMPASRNEFQRIQQQLETEKFPPQFPGGPHRAFHQLSREDQAAYEKKRLSEYC
RKAYKKTHVTRIEERYTTICQKENSFYVDTVRAFRDRRYEYKGLQKVAKKQVSDAVASGD
AGEIKSAKNREVLYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCFTGANIITKAR
EIIEQVGRPLELDTDGIWCILPASFPENYVIKSTHPKKSKVTISYPNAILNYMVKDAFTN
DQYHELINAETLEYKLRSENSVFFEVDGPYKAMVLPSSKEEGKRLKKRYAVFNFDGSLAE
LKGFEVKRRGELQLVKIFQSSVFDAFLKGDTLEECYDSVAKVADYWLDVLYSKGVNLPDS
ELFDLISENRSMSKKLEEYGGQKSTSISTAKRLAEFLGDQMVKDAGLACKFIISKKPEGA
PVTERAIPLAIFQSEPSVKRHFLRKWLKDTSINDIDIRQVLDWNYYIERLGGTIQKIITI
PAAMQGVANPVPRVRHPDWLHKKLLEKNDTLKQRRITELFSVKPKEVPQEVGSERMDGNE
VANGGSEDMFGSEMADIEDLGGSEVSPVGGRPVCNKRKRFQTPPGTSQDSSLSSQDWREA
LGPPPPMGTNKEERQAWLLYQKKKWALQAEARAARRGGAEKRARIDNGDGAPIARPSGFG
RGSAATLGGFLRRTQRTLLDTPWQIIQIAETSQPGVLKLWALVGHDLHQIKLKVPRIFYV
NQRLARAEPENNATTLWKKCNRILPRSRPVFHLYEYSVPEDLFREHSQELMADLSAPDIE
GIYETQMSLEFRALIRLGCVCSVDKHVARSMAHAGVPDTFQLEDLQFRSLSQQSYLETTE
DGNPLKHLYLYHHQIPNGTRAMFGLFIPPTKKSLIIVLDTVRTNQMPNMSSLYNAERNAK
VSRGHEETSLPQKEFNFEIRVETDVKQVYRLIQNALQAYRDERKGPSLLAIQSIHDLSTI
NSVMPGLGEFPQMAIHGLGDAENLYSALDWQRIGAKAILRHYLNSERVLTISTEQCRYFH
VPLGNLPADATLFGADLFYARHLSKQNFVLWCSNTDRPDLGGREADDNRLLTEFEESSTV
VSNSPNAYSTLCVDLEIDSLAVNTLLQSHHVHDIEGTAAGVAFDAMPQASLEDMISGQTA
ILPSYDETALCSAAFKVLRSMVNAWLRDVTMYKNEFADLQIVHFYRWIRSPNALLYDPAL
RRTLHNLMKKLFMQLVAEFKRLGSIIIYANFNKVMLCTKKKNVQDALAYVEYIVTSIHNK
ELFHSIQITYQQCWEYLLWLDLSNHAGVRGKLPTELENEQNEDEICTPKDDDDTPEIVMN
WNLMEYLPEDAACQDNFSAIIAGYIMKVYLHLKENLVADGQTPARKKRVSSQSQTQSKPL
GIGVHASTAEYAKELITGEMAQKLFYITEKIHKKLPSQPCNEKSLFPQLPGAHLKLINPA
LEFVKAVCKVLSLDTSVSDEVGVLRRNLLRLIKVGNFSDLAEWKDPCISFVLPEVICKSC
NHCRDIDLCKDNYKAEDEGRPVWKCPMCNNSYENVEIEHMLVDTINRKAMAAILQDLQCR
KCLQIKMENMPEYCSCAGEYNTLLSKSDFGIHLRTFRSIAEHFNMPLLLETVDWTIQTNP
SIVVS
NT seq 6858 nt   +upstreamnt  +downstreamnt
atggtgttgcaaaacagtggcaagtataaacccgaaaagggtggcagaggtgaaaagaat
tttagtggtgggccaaaagaggataacaatgaaagtcggctgaaacaagctttggagaac
gatgcgattgacagcaaatatggatttaaacgagttactgatcatcaagagcgggctggc
tttctcatcaatatgcacacaaccgaaattttggatgcagataaaaaattgataagtgcg
gtggactattactttattcaagatgatggtacacgattcaaggcatcattgccatacaag
ccatatttctacatcttagcaaagaaggaaaacattcaagaggtttcagcatacatctca
aagaagtttgctgggcacatttcatctttagagatagtgtcaaaagaagatttagatttg
cccaaccatttgattggtctgaagcaacggtatctcaaattatcatttctcacagtcaat
gatttgatgaaagttcgtcctcaaataatgtctgctgtgaaaaagaacaaagaaagggag
aagggaaacacctattactcagaacttctctccaaagcattagctaccaacagtactggt
gttacacccaagtttactgatcatatggaaaatattattgatataagggaatatgatgta
ccataccatatacgagtttcaattgacaacaaaatattttgtggctcatggtactcagtg
tgttctcgaggagcagaggccccttttattgtaaagcgaaatgacataattgaaagacct
gatatgattgttctagcatatgatattgaaacaaccaaacttcctctgaagtttccagat
gctcagtctgatcaaattatgatgatatcttacatgattgatggccagggttaccttatt
accaatagggaaattatttctgctgatgttgaggacttcgagtacactccaaaacctgag
tttgagggcttctttaccatttttaatgagcctgatgaacgtgctcttttgctccgattt
tttgaacacatcatggatgtcaagccacatatttttgtcacctataacggtgactttttt
gattggccttttgtggaagccagagcagctatccatcagctagacatgaagcaggaaata
ggcttttccaaaaacaaagaaggcacatactgttgccgctcagcgatgcacatggactgc
ctatgttgggtgaagcgtgattcataccttcctgttggatctcagaatttgaaagcagta
gctaaggctaaactccgctatgatcctgttgaaattgatcctgaagacatgtgtgctatg
gctgcggaacaacctcaagttatgtctaattactcagtgtctgatgctgttgccacttat
tacctgtacatgaagtatgtgcatccctttatttttgcactgtgcaccatcattcctttg
gaacctgatgaggtcttgaggaaaggatctggtactctctgtgaagcattgcttatggtt
gaagcattccacgccaacattatcttccccaacaaacaggaatctgaattgaataagctg
agtgaagatggtcatgttttggaccaggaaacttatgttggaggtcatgtggaagcacta
gaatctggcgtgtttcgagcagacatcccttgccagtttcgtattgttccaagtgcatgt
gagaagcttctgggtaatgtagaagatgctctcaaacatgccattgtggaggaagaacag
attcctttggaaatggtcactaactttgaagaaatagctgatgacattcgagttaaattg
caagatctcagagacactcctatgcgcctggaaacccccatcatctaccacttggatgtt
ggtgctatgtatcctaatattattttgacaaaccgtctccagccctctgcaatggtcgat
gagcaaacctgtgcagcttgtgactttaatcgacctggtgccaagtgccaacgtaaaatg
gcctggatgtggcgtggtgaagtcatgcctgccagtcgtaacgaatttcaaagaattcaa
caacaattggaaacagaaaagttccctcctcaatttccgggaggaccacatcgtgctttc
catcagttaagtcgagaggatcaagcagcctatgaaaagaaaagattatcagaatattgc
cgcaaagcctacaagaaaactcatgtcactcgtattgaagaaagatacacgacaatctgc
caaaaggaaaactccttttatgtcgacactgtgcgagcattccgagaccgcaggtatgag
tacaaaggtctgcaaaaggtggctaagaagcaagtttctgacgcagttgcaagtggtgat
gctggtgagatcaaatctgccaagaatcgagaagttttgtacgactccttgcagcttgct
cacaaatgtattctgaactctttctatggatatgttatgagaagaggagccagatggcac
agtatggaaatggctggaatcgtctgtttcacgggtgcaaatattatcacaaaggcaaga
gaaatcattgaacaagttggtcgccctctggaacttgatacagatggaatttggtgcatc
ttgcctgcatcttttcctgaaaattatgtcattaagagtacccatcctaaaaagtccaag
gtgaccatttcttatccaaatgctatattaaattatatggtgaaagatgctttcaccaat
gatcaataccatgaactaatcaatgctgaaaccttggaatataagctgcgaagtgaaaac
tctgtattctttgaggtagatggaccctacaaagccatggtactcccatcatcaaaagaa
gagggtaaaagattgaagaaaagatatgccgtcttcaattttgatgggtcacttgctgaa
ctgaaaggctttgaagtgaaaagaagaggcgaacttcagctagttaaaatttttcaatca
tctgtttttgatgcttttttgaagggtgacactcttgaagagtgctatgactcagttgct
aaggtggcagactactggctcgatgttttgtacagtaaaggtgtaaacttgcccgattca
gagctgtttgatcttatttctgagaatcgctctatgtcaaagaaacttgaagaatatgga
ggtcaaaaatcaacttctatcagcactgctaaacgtcttgctgagttccttggagatcaa
atggtgaaagatgctggtctggcatgcaaatttattataagtaagaaaccagaaggtgca
cctgtcaccgaacgagccatccctctggccatttttcagtctgaaccaagtgtcaaacgt
catttcctcagaaagtggctcaaagatacatctatcaatgatattgacatacgtcaagtt
ttggattggaattattacattgaaagactgggagggacaattcagaaaattattactatt
cctgctgccatgcaaggtgttgccaaccctgtgcctcgagtgcgccatcctgattggttg
cacaagaagctgctggaaaagaatgacactctcaaacagaggagaatcaccgaactcttt
tcagttaaacctaaagaagtccctcaggaagttggtagtgaaagaatggacggaaatgaa
gtagccaatggaggttctgaggacatgtttggttctgagatggctgacattgaagacctt
gggggtagcgaagtcagccctgtaggaggcagacctgtatgtaacaaaaggaaaagattc
caaactcctcctggcaccagtcaagactcttccttgtcttctcaggattggagagaggca
ttggggccccctccccccatgggcacgaataaagaagagaggcaagcatggcttctgtac
cagaagaagaaatgggcgctgcaggctgaggctcgtgcagccagacgaggtggggctgaa
aaacgtgcccgtattgacaatggtgacggggcccctatagctcgaccctctggctttgga
cgtggttctgctgcaacattgggtggatttttgaggcgaactcaacgcactcttcttgac
actccttggcaaattattcagattgctgaaacaagtcagccaggtgttctaaaactctgg
gcattagtggggcatgaccttcaccaaatcaagctgaaggttcctagaattttctatgtc
aaccaaagactagcaagggctgaaccagaaaataatgctacaaccctgtggaagaaatgt
aacaggatccttccaagatcgagacctgtgtttcatttatatgaatattctgtaccagaa
gacctgttcagagagcacagtcaggagctgatggctgatttgtctgctccagacattgag
ggcatttatgagacacaaatgtccttggaattcagagcactgattagactgggttgtgtt
tgctctgttgataaacatgtggcaagaagcatggcgcatgctggtgttccagacactttc
caacttgaggatcttcagttccgtagcttatctcagcagtcatatttagaaacaaccgaa
gatggaaatccactcaagcatttgtacttataccatcaccaaatacccaatggaaccaga
gcaatgtttggattgttcatacctcctaccaagaagtcattgataattgttcttgacaca
gttcgtaccaatcagatgcccaacatgagctcactttataatgctgaacgaaatgcaaaa
gtatctcgaggtcatgaagaaacatctttgcctcagaaagaatttaactttgaaattcga
gttgaaacagatgttaagcaagtttacagacttattcaaaatgctctgcaggcttaccgt
gatgaaagaaaggggccttctctcttggctattcagtcaatacatgatctttccaccatc
aattcagtaatgccaggcttaggggaattcccccagatggccatacatggtcttggagat
gcagaaaatttgtattcagccttggactggcagagaataggagccaaagctatcttgcgt
cattatttgaacagcgagagggttcttacaattagtactgaacaatgccgatacttccat
gtaccactaggaaatttacctgcggatgccaccctatttggtgcagacttgttctatgca
aggcatctttctaaacaaaattttgtcctttggtgttcaaatacggacagaccagatctt
ggtggaagggaagcagatgacaacaggcttttgacagaatttgaagaaagttctactgtt
gtttcaaattcaccgaatgcatattcaacgctgtgtgtggatctagagattgacagtctt
gctgtcaataccctgctccagtctcaccatgttcatgacattgaaggaacagctgctgga
gttgcatttgacgccatgcctcaagcatcgctggaagatatgatttctggacagacagca
atcttacccagctatgatgagactgcattatgcagtgcggctttcaaggttcttcgttct
atggtgaatgcttggctgcgtgacgtcaccatgtacaagaacgaatttgctgaccttcaa
attgtccacttttatcgctggataaggtcacccaatgccttactctatgatccagcgttg
aggcgcacactccacaatctcatgaagaaactattcatgcaactggtggctgaattcaag
cgacttggctctatcataatttatgctaatttcaacaaagtaatgttgtgtaccaaaaag
aaaaatgttcaagatgctctagcttatgtagagtacatagtcaccagtatccacaataag
gagctcttccacagtattcaaattacttaccaacagtgctgggagtacttgttgtggctt
gatctctctaaccatgctggtgtaaggggcaagttgccaacagagttagagaatgagcaa
aatgaagatgaaatctgcacacccaaagatgatgatgacactcctgaaattgtgatgaat
tggaacttgatggaatacctccctgaagatgctgcctgccaagacaatttctcagctatc
atagcaggatatataatgaaagtgtacctacacttgaaagagaacctcgttgcagatggg
cagacccctgctcgcaagaagcgcgtcagctctcaaagtcaaacccaaagcaaacccttg
ggtattggcgttcatgcatcaactgcagagtatgccaaagaactcatcactggggaaatg
gcacaaaagctattttacattactgagaaaatccacaaaaaactacctagtcaaccctgc
aatgagaaatctctcttccctcaactgcctggtgctcatctaaaactaataaaccctgct
ttggaatttgtcaaagctgtttgcaaggtcttgtccttggacacatctgtatctgatgaa
gttggtgtcctgcgtcggaatctcttgcggctcatcaaagttggcaactttagtgattta
gctgagtggaaggatccctgcatttcctttgttcttccagaggtcatctgtaaaagttgc
aatcattgtcgagatattgatctctgcaaggacaattataaagctgaggacgagggaagg
cctgtttggaagtgccccatgtgcaacaacagttatgaaaatgtggagatagaacacatg
cttgtagacacaataaataggaaagccatggcagccattctccaggacttgcaatgccgt
aaatgtttacagataaaaatggaaaatatgcctgagtattgcagctgtgctggtgaatat
aacacactcctctccaagtcagatttcggtattcacctcagaacctttagaagtattgct
gaacacttcaacatgcctcttcttttagaaactgttgactggacgatacaaacaaaccca
tctattgtagtaagttag

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