Thrips palmi (melon thrips): 117643414
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Entry
117643414 CDS
T08251
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117643414
03016 Transfer RNA biogenesis [BR:
tpal03016
]
117643414
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117643414
Spliceosome [BR:
tpal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117643414
Transfer RNA biogenesis [BR:
tpal03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
117643414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
117643414
NCBI-ProteinID:
XP_034238191
UniProt:
A0A6P8YMX4
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MTAFEEMGVLPEIGKAVEEMDWMLPTDVQSEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQITWEALKDLESGRGQKAGAGDSSLSTPWTLSFWDRDSSMAVTPDGLRCQSRATNWQGC
RATKAVQSSGKYYYEATVTDEGLCRVGWSTPQAVLDLGTDQWGYGFGGTGKKSNNKNFDS
YGESFGINDTIGCYLDLDNGEVSFSKNGKHLGKAFSIADNARNKTFHPAVVLKNAEMAFN
FGAAPFKYPHEAGFIALSEAPKELVRSPEATPVKVVKDAPQAIILEPSKELADQTFNQLN
LFMKFVDKPKVRTALVTGGVSVNENISALTKGVDIVVGTPGRLESLISSGHLSLKACRFF
VLDEADGLLKQGYADLINNLHRQIPKVTADGNRLQMIVCSATLHDFDVKKMAERLMHFPT
WVDLKGEDAVPETVHHVVVKVDPQQDRSWETLRKHILTDGVHVRDNVRPGNNTAETLSEA
VKMMKGEYCVKAIDEHKMDKALVFCRTKLDCDNLEKYFNQLGGGPRNPSNPYSCVCLHGD
RKPAERKENLEAFKQGKVKFLICTDVAARGIDINGLPFMINVTLPDEKSNYVHRIGRVGR
AERMGLAISLVSTVPEKVWFHGEWCPSRGRNCSNARLTNEGGCCIWYNEHQYLADIEDHL
NVTIQQVGADVKVPVDQFDGKVVYGQKKLNTGSSYENHVSQMAPAVQDLAQLESKAQLIY
LKRHFCKA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgtttgaagagatgggtgtactccccgagatcgggaaagctgtcgaagaaatg
gactggatgttgccaactgatgtccaatctgaagcgatacctctcattctcggcggtggc
gatgttttgatggcagcagagactggaagtggcaaaactggtgctttctgcttgcccatt
cttcaaattacatgggaagccttgaaggacttagaaagtggaagaggacaaaaagcagga
gcaggagactcctccctctcaaccccttggaccttaagcttctgggatcgtgactcgtct
atggcggtaactccagatgggctacgctgccaatctcgtgccaccaactggcagggttgc
agagctactaaagctgttcaaagctctggaaagtattactatgaggcaactgtgactgat
gaaggattatgtagagtgggctggagcactcctcaggctgtgctggatcttggaacagat
caatggggatatgggtttggtggtacaggcaaaaaatcgaacaacaaaaactttgattcc
tatggtgaatcatttggtattaatgacaccataggatgctatttggatttagacaacggc
gaagtctcatttagtaaaaatggcaagcaccttggtaaagctttcagcatagcagataat
gcaaggaacaagacttttcaccctgctgttgttttgaagaatgctgaaatggctttcaac
tttggagcagctcctttcaaataccctcatgaagctggctttattgctttgagtgaggct
ccaaaagagcttgtgcgtagccctgaggcaaccccagtaaaagttgtgaaggatgctcct
caagccattatactcgagccttccaaagagttagcagatcagacatttaaccagttgaat
ctgtttatgaagtttgtggacaagcctaaagtgcgtacagcacttgtaactgggggtgtc
agcgtcaatgaaaatatttctgctttaaccaaaggagttgatattgttgttgggacgcca
gggcgattggagagtcttatttcctcaggccatctctcattaaaagcttgtcgctttttt
gttcttgacgaagcagatggtctcctcaagcagggctatgctgacctcattaataactta
catcgccaaatccccaaagttactgctgatggtaatagacttcagatgattgtttgctct
gctactctccatgactttgatgttaagaaaatggcggaacgattaatgcactttcccact
tgggttgatctgaagggggaggatgctgtcccagaaactgttcatcatgttgtggtcaaa
gtagatccacaacaagatcgttcatgggaaaccttacgaaaacacattttgactgatggg
gttcatgtcagggacaatgttcgccctggcaataatactgcagagactctgtcagaggct
gtcaaaatgatgaaaggagaatactgtgttaaagccattgatgagcataagatggacaaa
gctcttgtgttctgccgcactaaattggattgcgacaatttggagaagtacttcaatcaa
ctaggaggaggtccacgcaatccctcaaatccatactcttgtgtatgcctccacggagat
cgcaagccagctgaacgtaaggaaaacttggaggcttttaaacagggcaaagtcaaattt
ctgatctgtactgatgttgctgctcgtggtattgatataaatggactgccgtttatgatt
aatgtaactcttcctgatgaaaaatcaaattatgttcatcgcattggccgagttggaaga
gcagagcgcatgggtcttgcgatctcacttgtctcgacagtacccgagaaagtatggttt
catggtgaatggtgtccctcccgaggtcgcaactgctctaatgctcgattaactaatgaa
gggggatgctgcatttggtacaatgaacaccagtatttggcggatatagaagaccatcta
aatgtcacaattcagcaagttggtgcagatgtaaaggtacctgttgaccaatttgatggg
aaggttgtgtatggtcaaaagaagcttaatactggtagtagttatgaaaatcatgtgtca
caaatggcacccgccgttcaagatctggcccaactagaaagcaaggcccaactgatttat
ctgaaaagacatttctgtaaggcttga
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