Thrips palmi (melon thrips): 117643514
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Entry
117643514 CDS
T08251
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117643514
Membrane trafficking [BR:
tpal04131
]
Protein recycling
Others
EARP complex
117643514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
PMEI
COG2_C
Motif
Other DBs
NCBI-GeneID:
117643514
NCBI-ProteinID:
XP_034238332
UniProt:
A0A6P8YW13
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MAVMGDFKQKFSGLLNKLGNQSRLSLSSPSEEVLKPISNEGFVSTPSKEDVKPPEEPAEI
LSDDEILESVEKEYFKELDFDPSRHELKKIGETLICDEILSHSERLHRQQKVVSKKVLSQ
ILTNQRACNEEFERIQNLQSILRETLSICRDGRSKLNTGKQQLTTTSLGILANYRKRQLL
RGILHSLNTIKTLQRSEEHIQVLLSESRYEDAISELLECQSAATSLKRFACVAALSGKLV
DTLVMTEEQLDVALGKICEKFDETLYGQLQAAYALLGKTQAAMDQLHMHFTSAIQNTALK
VIKSFVGKSESVVATSGKQYNELCKKVKEENFIPCLQELCSSLWRIVCSHHRVALWHQKH
TVDKGTNKGADLEVSFTNEYIRQKLESMQARIWQDVQARFSTYLFSTDLASFKFDNFLQV
LGFVHRLMEVGEEFCGSQSEELQKSVRLQSENYFAKYHAGCLEELRIFLENESWTHCPVK
SDFTCLQLQEFRSLRGVIQNIGLHEQQKLQQSPDSSNQSQDSNSVAGGYFSRFSESGTPF
DLANFDLQEEDILANISDEASGYFSDDSDEEVPEELKGDFVDEGHGDPSVHTSQVAVRFE
NCGRVRFEQKKVTRSKGRSSLPKGPLLTNTTLTVLRHCGKYLQMSRLLRTVAMDVIICLS
QLFQYYLYAVHAFFTTDLAVSQPNLYSVKLQAALKRINAELIRPEKQPSAMVQINQDDKK
KVPQPHISPIVNINDPESLFGLSERVVAVESLVFLADQLDSIRPYLEHLVRHEPRKHYIQ
QFYLQMVSVASDLRLPVYACISGRALDLRTMLNMMARVNWEIKEVSSQHSPYVDSVLRDM
QIFSMRLEEAASHLFISKDVHNTLWEALVIVCCSTFVEGFSNAKKCATGGRALMQLDFTQ
FISKLEKLTTLRPIPHKEYVELYVKAYYIPEEQLEKWIREHTQYSSKHLQTLIQCACQNN
KKTRQRLSGVIEEMERLGLIK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaatgggagacttcaagcaaaagttttctggtctcctcaataagttgggtaat
caatcacgattatcattgagcagtccgtctgaagaagttttgaaaccaatttcgaatgaa
ggatttgtatccaccccctctaaagaagatgtgaaacctccagaagagccggcagaaatt
ttatcagatgatgaaatattggaatccgtggaaaaagaatatttcaaagaactcgatttt
gacccaagtagacatgaattgaagaaaataggcgagacattaatttgtgatgaaatttta
agccattcagagcgactgcacaggcagcagaaagttgtatccaagaaagtcttatctcaa
atactgacaaatcaaagagcatgtaatgaagaatttgaaaggattcagaatctgcaatct
atattacgtgagaccttatccatctgccgagatggcagatcaaaactcaatacaggcaaa
caacagctaacaactacaagtttaggaatactcgcaaactaccgcaagagacagttacta
cggggaatattgcattcattaaataccatcaaaacactgcaacgctcagaagagcatatt
caggttctattgagtgagagcagatatgaagatgccataagtgaactacttgagtgtcaa
tctgctgctacttcactcaaacgctttgcatgtgtggccgctctcagtggaaaacttgtt
gacactttggtgatgaccgaagaacagttagatgtagctctaggaaagatttgtgagaag
tttgatgaaacattatatggacaactgcaggcagcttatgcattattaggcaaaactcaa
gctgctatggatcaattacacatgcacttcacttcagccattcaaaatacagccttgaag
gtcatcaagagttttgtaggtaaatctgaatccgttgttgctaccagtggaaagcagtac
aacgagctgtgtaaaaaagtgaaggaagaaaatttcattccttgtcttcaagaattatgc
tcaagtttatggagaattgtttgcagtcatcatagagtggcattatggcaccagaagcat
actgttgacaagggcacaaacaaaggcgctgatttggaagtcagtttcacaaatgaatac
attcgacagaagttggagagtatgcaagcaagaatatggcaagatgttcaagctcgcttc
tcaacctatcttttctcaactgatctagcctcattcaaatttgataattttttgcaagtt
ttgggctttgtgcacaggttaatggaagttggagaggagttctgtggaagccagtcagaa
gaactgcagaagtctgtgagactgcagagtgaaaactattttgctaagtaccatgctgga
tgcttggaagaacttcgcatatttttggaaaatgaaagctggacacactgcccagtaaaa
agtgacttcacctgccttcagcttcaagaatttcgttccctacgaggtgtcattcaaaat
attggtcttcatgaacagcaaaagcttcagcagagccctgatagtagcaatcagtcacag
gatagcaattcagttgctggcggatacttttcacgattttcagagtctggcacacctttt
gatttagctaattttgacctacaagaagaagatattttagcaaatatttccgatgaagct
tcgggctactttagtgatgacagtgatgaagaagtgccagaggaactgaaaggagatttt
gtcgatgaagggcatggcgatccttctgttcacaccagccaggttgcagttcggtttgag
aactgtgggcgtgtacggtttgaacaaaaaaaagtaactcgaagcaaaggtcgctcttct
ctgcccaagggaccgctcctaacaaacacaacattaactgtcctacgacattgtggaaaa
tatttgcaaatgagcagacttttacgtacagttgccatggatgtcataatatgtttatct
cagctcttccagtattacttgtatgctgtccatgcttttttcaccaccgatcttgctgtg
agccaaccaaatctgtatagtgtgaagctccaagcagctttgaaacggattaatgctgaa
ttaattcgacctgagaaacaaccaagtgccatggtgcaaatcaatcaagatgataagaaa
aaagtaccgcagcctcatatatcacctatagtcaacatcaatgatccggaaagcctattt
ggattatcagagcgtgtagtagcagtggaatcccttgtatttttagcagatcaattggac
tctattagaccttacctggagcatttggttcgtcatgagcctaggaaacattatattcaa
cagttttatttacagatggttagtgtggcatcagatttacggttgcctgtatatgcctgc
atatctgggagagcacttgatttacgtactatgttaaacatgatggcacgtgtcaactgg
gagataaaagaggtttcaagtcagcatagtccctatgtggattctgtgttaagagatatg
caaatttttagcatgcgtctggaggaagctgcttctcacctatttatttccaaagacgta
cacaatactttgtgggaagctcttgttattgtttgctgcagtacatttgtcgaaggcttt
tccaatgcaaagaaatgtgcaactggaggccgggctttaatgcagcttgactttacccaa
ttcatctctaagcttgaaaagctcaccacattaaggccaattccccataaagaatatgta
gagctgtatgttaaagcttattacataccagaagagcaattggagaagtggattcgtgag
catacacaatattcaagcaaacatcttcaaacactgattcaatgtgcttgtcaaaataac
aagaagactcgtcaaagactgtcgggggttattgaagaaatggaacggcttggtttaata
aagtaa
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