Thrips palmi (melon thrips): 117643518
Help
Entry
117643518 CDS
T08251
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117643518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117643518
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117643518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
117643518
NCBI-ProteinID:
XP_034238336
UniProt:
A0A6P8YNB9
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MSPSTSSEAVEDQKLRPFFCELDVLSRPDGSAIVSQGDTTAIAGVYGPIEAKPNKTYIEK
AAIEAIYRPKSGLPCVPDRMSESTLQHTFEAAILTTAHPRTLITISIQEMQDSGGLLACA
INAGCLAIMNSGLPMRFLVAAVNCMIHENGDIILDPDEKQLKESCAVMTFAFDNVNKNIV
SSSTDGSFSETQYQEAILKCRSACDEIFQLYRDIVKKYAPSMG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctcgacttcatcagaagctgttgaagaccagaagctcagacctttcttctgt
gaattggatgttttgagtagacctgatggaagtgccatagtatctcaaggcgacactact
gctattgcaggtgtttatggacccattgaggcgaaaccgaacaaaacttacattgaaaaa
gctgctattgaggcaatttatagaccgaaaagtggactaccatgtgtcccagatcgaatg
agtgaaagtacactgcagcatacatttgaagctgctatactaaccacagcacatccccgg
acactcataactatttctatacaggagatgcaggattctggtggtctattagcctgtgct
ataaatgcaggatgcctggccataatgaactctgggctgcctatgagatttctagttgct
gctgttaactgcatgatccatgaaaatggagacatcattttggatcctgatgaaaaacag
ctcaaggaatcctgtgcagttatgacatttgcctttgataatgtaaataagaatattgtg
tcatccagcacggatggcagtttttctgagactcagtaccaagaagctattcttaagtgc
cgctcagcgtgtgatgaaattttccagttgtatcgtgatatagtaaaaaaatatgctccc
tcaatgggctag
DBGET
integrated database retrieval system