Thrips palmi (melon thrips): 117643654
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Entry
117643654 CDS
T08251
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117643654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117643654
03016 Transfer RNA biogenesis [BR:
tpal03016
]
117643654
Enzymes [BR:
tpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
117643654
Messenger RNA biogenesis [BR:
tpal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
117643654
Transfer RNA biogenesis [BR:
tpal03016
]
Prokaryotic type
tRNA degradation factors
117643654
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
Nop16
Motif
Other DBs
NCBI-GeneID:
117643654
NCBI-ProteinID:
XP_034238550
UniProt:
A0A6P8YMZ1
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MRNVRADTPKKVAADSSHVSHDIHRAMAGILRGTFRRSKLEPLTNLTSRALTISAIQCSP
FNEVQATATLSSGKSIKFSCGKYAKMANGAAVAQSGETAVMVTAVRKDSPSSHDSFMPLN
VEFRMKAAAAGRIPTNYLRRELGHSEREILTARLTDRSIRPLFPKNYFSEVQIISNMLSA
DGTNDPEILCINAASMALALSDIPWDGPVAAVRIGMLGDDLVINPTRQELQNSSMNLVVT
GMKSKVVMLEGSFNDLNANIVMHSIKAGLKEIQKIISVIQELVVNCGKAKQEIPEDSMHQ
ELVEYLVSHHLEDLKQILTDFSLNKQSRDQAVSSLRQKIINEMKSKGVIHDDINIRKAFS
VFLQDVFRNLIFKTGIRCDGRGLNDVRDISCEVNLYKPLHGSALFQRGQTQVLCTVALDS
PQSAVKTDSYTILTSGPKEKSFFLNYEFPGYATNEVSLKKGVSRREIGHGALAEKGLRPV
VPPNYPFCIRLTSEVLESNGSSSMASVCGGTLALLDAGVPISAMAAGVAVGLITRCDSDG
KITDYRLLTDILGMEDYFGDMDFKIAGTKSGITALQADFKISGLPLDILNQAITAGHTAK
RNIINIMSQTISKPSVKDEDNMPILETFEVPLHKRNKLLGPAWINVKKLFLETGVQITHL
EDTKFSAFAPNASAMQEAYEIVQKLMDSSSEPEFEFGAIYVVKILELKESGAIVSLHPDL
NPIYINNSHLDVRKAAHSSALGLSVGDKISVKYFGRDPVSGQVRLSRRALQESSGRVVDL
VDKTSSPTQITREKLTTKAPTEDQN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatgtacgggcagacactccaaaaaaagtagcagccgactcctcgcatgtctcg
catgatatacatagagccatggcaggcattctaagagggacttttcgacgctcaaagctg
gagccgctgactaacctaacatctcgtgctttgactatcagtgcaattcaatgcagtcca
tttaatgaagtgcaagcgacagcaaccttatcctccgggaaaagtataaaattttcctgt
ggaaagtacgctaaaatggccaatggagctgctgttgcgcagtcaggagagacagcagtc
atggtcacagctgtcaggaaggactccccttcatcacatgattcgtttatgcctctcaat
gtggagttcaggatgaaggctgcagcggcggggagaatcccaaccaattacctccgcaga
gagttgggccattctgagcgcgaaatattaactgcaagattgactgaccgctcaattcgt
cccctttttcctaagaattatttctctgaagttcaaataatttcaaatatgctttcggca
gatggtaccaatgaccctgaaattttgtgtattaatgctgcatcaatggctcttgcgcta
tcagacattccttgggatggcccagttgctgctgtgcgcattggcatgttaggtgatgat
ctggttataaacccaacaagacaagagttgcaaaacagttccatgaatttagttgtcact
ggtatgaaatccaaagtcgtgatgcttgaaggaagttttaatgacctcaacgccaatatt
gtcatgcatagtattaaagctggtttgaaagaaattcagaaaattataagtgttattcaa
gaattggttgtaaattgtggtaaagctaagcaagaaattcctgaagattcaatgcatcaa
gaattagtagagtatttagtgtctcaccatttagaagatttaaaacaaatactgacagat
ttctccttaaataaacaatcaagagatcaagctgtatcttcactcaggcagaaaataatt
aatgaaatgaaatccaagggagtaatacatgatgatatcaacattaggaaagcattttct
gtttttcttcaagatgttttccgcaatttaatttttaagacaggtattaggtgtgatggg
agaggattgaatgatgtcagggacatttcatgtgaggtgaacttatataaaccccttcat
ggctctgcattatttcagcgagggcaaactcaggttttatgcactgtggctttagattct
cctcaatctgcggttaaaactgattcttacaccatacttaccagtgggcccaaggaaaaa
agctttttcctcaattatgaatttcctggctatgcaacgaatgaagtatcattaaagaaa
ggggtcagtcggcgagaaataggacatggtgctcttgccgaaaaaggattgagacctgtt
gttcctccgaattatcctttttgcataagacttacttcagaagttcttgaatcaaatggt
tcatcttctatggcgtcagtatgtggtggaactttagcactgttagatgcaggagtacct
atttcagccatggcagcaggtgttgcagtaggactcataacacgctgcgattctgatggc
aaaataacggattacagacttctaacggacattttaggaatggaagattattttggtgac
atggattttaaaatagcaggaaccaaatctggcataacagctttgcaagcagattttaaa
atttcaggtttacctctggatattttaaaccaagctatcactgcaggacatacagctaag
agaaatatcatcaatataatgagtcaaaccatttcaaaaccaagtgtaaaagatgaagat
aacatgcctatcttggaaacttttgaggttcctcttcacaaacgcaacaaattacttgga
ccagcatggatcaatgttaagaaacttttccttgaaacaggggttcagattactcatttg
gaagataccaagttttctgcctttgctccaaatgcctctgcaatgcaagaagcttatgaa
attgttcaaaagctgatggacagcagttcagaacctgaatttgaatttggtgctatttat
gtagtaaaaattctggaattaaaagagtctggtgctatagtctcacttcatccagatcta
aatccaatttacattaacaactcccatctggatgttcgaaaggcagcacattccagcgca
ctaggtctttcagttggcgataagatatcagtgaaatattttggacgtgaccctgtcagt
ggacaagtgcgattgtctcgaagagctttgcaggaatcaagtggtcgtgttgtagattta
gtggataaaacatctagtccaacacaaattactagagaaaaactaacaactaaggctccg
actgaagatcaaaattaa
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