Thrips palmi (melon thrips): 117643685
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Entry
117643685 CDS
T08251
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117643685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117643685
Spliceosome [BR:
tpal03041
]
Complex A
U1 snRNP components
U1 related factors
117643685
Complex B
117643685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Spherulin4
TRAPP14_N
Dicers_N
WW_2
DUF4298
Motif
Other DBs
NCBI-GeneID:
117643685
NCBI-ProteinID:
XP_034238603
UniProt:
A0A6P8YFU1
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MAGPEGGAPPGAFSAGMPHMAPGFIPTPGMANPGPMFNMPPPGFGVPGYAPATNGESQLN
GVDDNSNPSLGFKKSDWSEHTAPDGRIYYYNSVTKNSLWEKPDELKTTTELLLSKCPWKE
YTSETGKTYYHNVETKESRWVIPDELKDLKNRIAAEEVKSIAVPAIAGIGGPSLPLGAAP
MMPIPPGGVHLGTPPHNMKNSSALDAAMAATLATLGGGGDAASKKGFTPANKNDGAEPKL
VFKDKKEAIEAVKDLLRDHDVPSNASWEAAVKLIQHDSRYAVIKNLNERKQAFNAYKTQR
QKEEKEGQRLRAKKAKEDLEEYLMNNPRMTSLTKYYRCEEMYGVLDVWKNVSENDRRDIY
EDVIFNLAKKEKEDAKNLKKRNMKTLSEILDSMTSINYRSTWQEAQQVLIENPAFADDAD
LLAMDKEDALIVFEEHIRELQKEEEEEKERDKRRLKRQHRKNRDAFISLLDELHEQGKLT
SMSLWVELYPIISADLRFSAMLGQGGSTPLDLFKFYVEDLKSRFHDEKKIIKEILKEKNF
DVQVTTSFETFATVVCDDRRSATLDAGNVKLTYNALLEKAEARESQRQKDEARKFKKLEA
AFKQLIKSTDVTYETPWEEARLKFEGDKAFEAITLESERVRIYKEFQHENEDSCAHYHIR
PKKSKKSKSKKKKSNSRSRSRSLSDTEDEHGKRKKRKRRSRSRSESHSSSGSDRHPSKRS
KRKKAKKRKGRSRSPSAHRSGSDDGTRSKTAPPAEDTVVSDATVFPPEVSVEKDPPESPS
AVKDAPKEEGETTDRVSEERELSEDELENQRLLLLKQLQEQQED
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacctgagggaggcgccccgccaggggcattttccgctggaatgccccacatg
gctcctggctttattccaaccccaggaatggcaaaccctggacccatgttcaacatgccg
cctcctggcttcggcgttccaggctatgccccagcaaccaacggagagagccagctgaac
ggtgttgatgacaactccaacccatctctaggtttcaaaaagagcgattggtcagaacac
actgcacctgacggtagaatctattattacaattctgttaccaagaatagcttatgggag
aaaccggatgaactgaaaaccaccacagagctcctcctctccaaatgtccctggaaagag
tacacgtcagaaactggtaaaacctactatcacaatgttgaaactaaagagtcccgttgg
gtgataccagatgaactgaaagatctgaaaaatcggattgctgctgaagaagttaaaagc
attgctgttcctgccattgctggtattggaggtccttccctacccctaggggctgctcct
atgatgcccattccccctggtggagtacaccttggcacaccacctcacaacatgaaaaac
agctctgctctggatgcggcaatggcagccacccttgccactcttggaggcggaggtgat
gctgcatccaagaaaggatttaccccggctaataaaaatgatggtgctgaaccgaaatta
gtttttaaagataaaaaggaggcaattgaggctgtgaaagacctgctgagggatcatgat
gtaccaagcaatgcatcatgggaagcagcagttaaattaattcagcatgattcaaggtat
gctgttataaagaatttgaatgagcgaaaacaggcatttaacgcttacaagacacaaaga
cagaaggaagaaaaagagggtcagcgattaagagccaaaaaggctaaggaggatcttgag
gaatatttgatgaacaatcctcgaatgacttctttgaccaagtattacagatgtgaagaa
atgtatggagtccttgatgtttggaagaatgtgagtgaaaacgacagaagggatatctat
gaagacgtaatcttcaatcttgcaaaaaaggaaaaagaagatgctaaaaatctgaaaaaa
cgtaacatgaaaaccctgtcagaaattttggactcgatgactagcatcaattatcgttcc
acttggcaagaagctcagcaggtgctcattgaaaaccctgcttttgctgatgacgcagat
ttattggccatggacaaagaagatgcattaattgtatttgaagaacatataagagaactt
cagaaggaggaagaagaagaaaaggaaagggacaagcgccgattaaaaagacagcatcga
aagaatcgagatgcttttatttctctcctagatgaacttcacgaacaagggaaacttaca
tctatgtcattatgggtcgaactctatccaattattagtgctgatctaaggttttcagcc
atgctaggtcaaggaggttcaactcctttagatttgtttaaattttatgttgaagacttg
aagtctcgcttccatgatgaaaagaaaataataaaagaaatattgaaggagaagaacttt
gatgtacaagtgaccacttcattcgaaacatttgcaactgtggtttgtgatgatcgtaga
tcagctacattggatgcaggcaatgtcaaacttacatataatgctttgcttgaaaaggct
gaggcaagagaatcacagcgccaaaaagatgaggccaggaaattcaagaaacttgaagct
gcgttcaagcagctgatcaaatctacggatgtaacatatgaaactccttgggaagaggcc
cgcctgaaatttgagggtgacaaagcatttgaggcaatcacccttgaatctgagcgtgtt
cggatatataaggaatttcaacatgaaaatgaagattcttgtgctcattatcacattcgg
cccaaaaagtcaaaaaaatcaaaatcaaagaaaaagaaatcaaactccagatccagatct
cgatcattatctgacacagaagatgaacatgggaagaggaaaaaacgaaagaggaggtca
cgttctagaagtgaaagtcattcaagttcaggttctgatagacatccatcaaaacgatcc
aaacgcaagaaggccaagaagaggaaaggaagaagtagatcgccttcagctcaccggtca
ggctcagatgatggcaccagaagtaaaactgctcctcctgcagaagacactgtggtctct
gatgcaactgtgttcccccctgaagtaagcgttgagaaggatccccctgaatctccttct
gctgttaaggatgcccctaaagaagaaggagaaactaccgatcgggtgtcagaggaaaga
gaactcagtgaagatgaacttgaaaatcagagactgcttctcttgaagcagcttcaagag
caacaagaggattag
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